Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lsi08g01229	ATGGCTTTTCGCAACCAGCTCTCTCGGGACCTTCCTCTCCATTACACAAACCAGCCTCAACAGCAGCAACCGGAACGGCCGCTTTCTGATAATACTTTGCGCTCGATTCTATCTGATCAGCTCACCGACCACTCTCCGGCTGGCGATGGTTCTAAGTCTGAGCATCCGCTTCAGAGCGCTCCGAATTGGCTGAATAGTGCGCTACTTCGGAATCAAACCCCTCATTCTCACTACGCTGGTGACACCACGACGACCGCTGCGGATAACGTCAACACCGACTTTCTTAATCTTCACACGACTGCTCCAAATTCTGCCGTTTCTCACCCCTCCGGTCAATGGCTCTCCCGCCCGATCCTCCATCGCAATCAAAGTGATGTTATCGATGACGTCGCCGATGCTATGATTGGCGCTACTGCCACCTTGTCGCGTGAATCGGATGATTTGAAGAACAACAGCAGCGGCGGGGGAGGGGAGGGGGTTAATAACAGCGACGATGTGGCGGTTGAGAGCGATGGTAATGAAGGTGCTCATGGTGGAGAGGCGGCGATGAATTGGCAGAATGCGCGGTTTAAGGCTGAAATTCTGGCGCATCCTCTTTACGAACAGCTGCTCTCTGCTCATGTCGCCTGCCTCCGGATCGCAACGCCGGTGGACCAGTTGCCGAGAATAGATTCTCAGCTTTCTCGGTCTCAGAATGTGGCGGCGAAATACTCGTCGCTGGGCAACGGTTCTCAGCCCATAGTTGGCAATGGAAAAGAGCTTGATCAGTTCATGACGCATTATGTATTATTACTTTGTTCTTTTAAAGAACAACTCCAGCAACATGTCCGTGTCCATGCAATGGAAGCTGTATATGCCTGCTGGGAAATTGAGCAATCTTTGCAAAGCTTGACAGGTGTTTCACCAGGTGAAGGTACGGGTGCTACAATGTCTGATGATGAGGAAGACCAGATAGATAGCGATGCTAATTTGTTTGATGGAAGTTTGGAGGGTCATGATGCTATGGGGGAGGAGATTTTGCGAAAAAGGAGAGCAGGTAAACTTCCTGGTGACACCACGTCCGTCTTAAAAGCTTGGTGGCAATCACATTCAAAATGGCCGTATCCAACTGAGGAAGATAAAGCAAAGTTGGTTCAGGAAACTGGCCTTCAACTGAAGCAGATAAATAACTGGTTTATTAACCAGAGAAAGAGGAATTGGCACACAAATCCTTCAACCTCAACAACCTTGAAGACTAAACGCAAAAGGTATAGCTACTGA	1260	49.44	MAFRNQLSRDLPLHYTNQPQQQQPERPLSDNTLRSILSDQLTDHSPAGDGSKSEHPLQSAPNWLNSALLRNQTPHSHYAGDTTTTAADNVNTDFLNLHTTAPNSAVSHPSGQWLSRPILHRNQSDVIDDVADAMIGATATLSRESDDLKNNSSGGGGEGVNNSDDVAVESDGNEGAHGGEAAMNWQNARFKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDSQLSRSQNVAAKYSSLGNGSQPIVGNGKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVYACWEIEQSLQSLTGVSPGEGTGATMSDDEEDQIDSDANLFDGSLEGHDAMGEEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKAKLVQETGLQLKQINNWFINQRKRNWHTNPSTSTTLKTKRKRYSY	419

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
8	20736876	20742092	-	Lsi08G012290.1	Lsi08g01229	669155

Annotation

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lsi08g01229	419	Pfam	Homeobox KN domain	359	398	IPR008422	GO:0003677\|GO:0006355
Lsi08g01229	419	SMART	KNOX2_2	244	299	IPR005541	GO:0003677\|GO:0005634
Lsi08g01229	419	ProSiteProfiles	'Homeobox' domain profile.	339	402	IPR001356	GO:0003677
Lsi08g01229	419	MobiDBLite	consensus disorder prediction	40	59	-	-
Lsi08g01229	419	CDD	homeodomain	342	403	IPR001356	GO:0003677
Lsi08g01229	419	Pfam	KNOX2 domain	248	298	IPR005541	GO:0003677\|GO:0005634
Lsi08g01229	419	SMART	KNOX1_2	188	232	IPR005540	GO:0003677\|GO:0005634
Lsi08g01229	419	PANTHER	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	337	417	-	-
Lsi08g01229	419	PANTHER	CLASS II KNOTTED-LIKE HOMEOBOX PROTEIN	48	336	-	-
Lsi08g01229	419	SMART	HOX_1	341	406	IPR001356	GO:0003677
Lsi08g01229	419	MobiDBLite	consensus disorder prediction	399	419	-	-
Lsi08g01229	419	MobiDBLite	consensus disorder prediction	144	159	-	-
Lsi08g01229	419	SUPERFAMILY	Homeodomain-like	341	405	IPR009057	-
Lsi08g01229	419	Pfam	KNOX1 domain	191	230	IPR005540	GO:0003677\|GO:0005634
Lsi08g01229	419	PANTHER	CLASS II KNOTTED-LIKE HOMEOBOX PROTEIN	337	417	-	-
Lsi08g01229	419	PANTHER	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	48	336	-	-
Lsi08g01229	419	Gene3D	-	338	412	-	-
Lsi08g01229	419	MobiDBLite	consensus disorder prediction	144	179	-	-
Lsi08g01229	419	MobiDBLite	consensus disorder prediction	10	29	-	-
Lsi08g01229	419	MobiDBLite	consensus disorder prediction	1	29	-	-

Pathway

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lsi08g01229	-	-	-	csv:101213817	717.227

Dupl-types

Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
Lsi08g01229	Lsi-Chr8:20736876	Lsi11g01422	Lsi-Chr11:22788484	9.91E-30	dispersed
Lsi09g00319	Lsi-Chr9:3295926	Lsi08g01229	Lsi-Chr8:20736876	3.59E-44	transposed
Lsi04g02098	Lsi-Chr4:28156679	Lsi08g01229	Lsi-Chr8:20736876	0	wgd

Syn-Families

Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
Lsi09g01939	CCT,ECH	59	601	Homeobox Transcription Factor Family	AT4G00730	63.0	2.8e-173	605.5
Lsi05g01248	.	43	527	Homeobox Transcription Factor Family	AT4G00730	55.9	3.8e-138	488.8
Lsi05g02010	CCT,ECH	15	488	Homeobox Transcription Factor Family	AT4G00730	55.5	1.3e-135	480.3
Lsi03g01401	.	1	280	Homeobox Transcription Factor Family	AT3G01470	55.5	6.0e-57	218.0
Lsi02g01555	.	1	276	Homeobox Transcription Factor Family	AT3G01470	52.0	3.4e-52	202.2
Lsi07g00510	.	69	763	Homeobox Transcription Factor Family	AT1G79840	58.1	1.6e-215	746.1
Lsi04g00442	.	4	304	Homeobox Transcription Factor Family	AT1G69780	64.1	1.7e-81	299.7
Lsi01g00085	.	4	847	Homeobox Transcription Factor Family	AT2G34710	79.3	0.0e+00	1358.6
Lsi02g00942	.	4	850	Homeobox Transcription Factor Family	AT2G34710	76.4	0.0e+00	1290.4
Lsi02g02997	.	3	995	Homeobox Transcription Factor Family	AT2G34710	55.9	1.1e-301	1032.7
Lsi10g01265	.	23	773	Homeobox Transcription Factor Family	AT2G34710	63.9	5.4e-298	1020.4
Lsi04g02325	.	1	911	Homeobox Transcription Factor Family	AT2G34710	55.0	9.0e-277	949.9
Lsi03g00048	.	8	770	Homeobox Transcription Factor Family	AT2G34710	60.5	1.2e-252	869.8
Lsi02g02997	.	1	947	Homeobox Transcription Factor Family	AT1G52150	71.5	0.0e+00	1276.9
Lsi04g02325	.	7	863	Homeobox Transcription Factor Family	AT1G52150	65.0	0.0e+00	1088.9
Lsi01g00085	.	7	804	Homeobox Transcription Factor Family	AT1G52150	66.5	1.8e-303	1038.5
Lsi02g00942	.	14	802	Homeobox Transcription Factor Family	AT1G52150	63.6	1.0e-282	969.5
Lsi10g01265	.	23	724	Homeobox Transcription Factor Family	AT1G52150	62.1	2.0e-262	902.1
Lsi03g00048	.	18	772	Homeobox Transcription Factor Family	AT1G52150	57.7	1.4e-234	809.7
Lsi07g01279	.	1	277	Homeobox Transcription Factor Family	AT4G16780	62.1	1.9e-82	302.8
Lsi05g02181	.	48	329	Homeobox Transcription Factor Family	AT4G16780	56.3	6.0e-68	254.6
Lsi01g00857	.	59	227	Homeobox Transcription Factor Family	AT4G16780	63.2	4.3e-50	195.3
Lsi02g02612	.	157	280	Homeobox Transcription Factor Family	AT4G16780	76.8	5.8e-47	184.9
Lsi05g00810	.	51	244	Homeobox Transcription Factor Family	AT4G16780	57.9	5.8e-47	184.9
Lsi03g01746	.	216	337	Homeobox Transcription Factor Family	AT4G16780	77.2	3.2e-45	179.1
Lsi06g01229	.	139	255	Homeobox Transcription Factor Family	AT4G16780	69.2	2.4e-40	162.9
Lsi04g01446	.	118	237	Homeobox Transcription Factor Family	AT4G16780	69.7	5.9e-39	158.3
Lsi05g02181	.	87	334	Homeobox Transcription Factor Family	AT2G44910	63.0	9.7e-67	250.8
Lsi07g01279	.	25	249	Homeobox Transcription Factor Family	AT2G44910	62.3	1.3e-66	250.4
Lsi02g02612	.	165	291	Homeobox Transcription Factor Family	AT2G44910	78.1	2.7e-48	189.5
Lsi03g01746	.	122	335	Homeobox Transcription Factor Family	AT2G44910	58.6	5.9e-48	188.3
Lsi01g00857	.	70	234	Homeobox Transcription Factor Family	AT2G44910	60.8	1.7e-47	186.8
Lsi05g00810	.	126	244	Homeobox Transcription Factor Family	AT2G44910	73.3	2.0e-43	173.3
Lsi06g01229	.	139	263	Homeobox Transcription Factor Family	AT2G44910	66.4	9.2e-41	164.5
Lsi04g01446	.	121	237	Homeobox Transcription Factor Family	AT2G44910	67.5	2.8e-37	152.9
Lsi02g02997	.	9	995	Homeobox Transcription Factor Family	AT4G32880	66.0	0.0e+00	1241.9
Lsi04g02325	.	18	911	Homeobox Transcription Factor Family	AT4G32880	67.4	0.0e+00	1204.9
Lsi01g00085	.	14	847	Homeobox Transcription Factor Family	AT4G32880	66.1	0.0e+00	1088.9
Lsi02g00942	.	14	850	Homeobox Transcription Factor Family	AT4G32880	62.6	7.9e-302	1033.1
Lsi10g01265	.	14	773	Homeobox Transcription Factor Family	AT4G32880	59.7	1.2e-273	939.5
Lsi03g00048	.	12	772	Homeobox Transcription Factor Family	AT4G32880	57.6	1.6e-238	822.8
Lsi01g00085	.	7	847	Homeobox Transcription Factor Family	AT1G30490	78.6	0.0e+00	1322.0
Lsi02g00942	.	7	850	Homeobox Transcription Factor Family	AT1G30490	74.8	0.0e+00	1237.6
Lsi02g02997	.	2	995	Homeobox Transcription Factor Family	AT1G30490	54.2	8.0e-286	979.9
Lsi10g01265	.	5	773	Homeobox Transcription Factor Family	AT1G30490	61.1	3.4e-284	974.5
Lsi04g02325	.	2	911	Homeobox Transcription Factor Family	AT1G30490	52.9	9.8e-260	893.3
Lsi03g00048	.	5	770	Homeobox Transcription Factor Family	AT1G30490	59.4	7.3e-247	850.5
Lsi10g00143	.	53	772	Homeobox Transcription Factor Family	AT4G21750	63.1	4.7e-253	870.9
Lsi02g00624	CCT	7	662	Homeobox Transcription Factor Family	AT4G21750	58.0	3.8e-218	755.0
Lsi01g00412	CCT	20	544	Homeobox Transcription Factor Family	AT4G21750	70.2	6.9e-212	734.2
Lsi11g01463	.	88	623	Homeobox Transcription Factor Family	AT4G21750	65.8	1.5e-211	733.0
Lsi09g01939	CCT,ECH	93	853	Homeobox Transcription Factor Family	AT4G21750	53.2	5.5e-209	724.5
Lsi05g01248	.	50	780	Homeobox Transcription Factor Family	AT4G21750	50.1	1.3e-189	660.2
Lsi07g00984	.	1	139	Homeobox Transcription Factor Family	AT4G21750	63.7	7.3e-44	176.0
Lsi03g01817	.	253	453	Homeobox Transcription Factor Family	AT5G41410	55.6	3.1e-61	233.4
Lsi10g00586	.	259	472	Homeobox Transcription Factor Family	AT5G41410	54.5	9.0e-37	152.1
Lsi03g00020	.	520	695	Homeobox Transcription Factor Family	AT1G75410	51.1	4.0e-41	166.0
Lsi01g01043	.	298	721	Homeobox Transcription Factor Family	AT2G23760	58.0	2.7e-98	356.7
Lsi10g00586	.	251	476	Homeobox Transcription Factor Family	AT2G23760	68.2	7.1e-75	278.9
Lsi07g01279	.	1	277	Homeobox Transcription Factor Family	AT4G17460	56.8	2.5e-74	275.8
Lsi05g02181	.	43	313	Homeobox Transcription Factor Family	AT4G17460	55.9	3.4e-63	238.8
Lsi01g00857	.	1	229	Homeobox Transcription Factor Family	AT4G17460	52.8	2.4e-45	179.5
Lsi02g02612	.	150	295	Homeobox Transcription Factor Family	AT4G17460	69.5	5.4e-45	178.3
Lsi03g01746	.	216	327	Homeobox Transcription Factor Family	AT4G17460	78.8	4.8e-41	165.2
Lsi07g01279	.	1	277	Homeobox Transcription Factor Family	AT5G47370	58.8	3.9e-75	278.5
Lsi05g02181	.	43	329	Homeobox Transcription Factor Family	AT5G47370	55.3	7.6e-63	237.7
Lsi02g02612	.	72	286	Homeobox Transcription Factor Family	AT5G47370	53.5	1.1e-48	190.7
Lsi01g00857	.	1	229	Homeobox Transcription Factor Family	AT5G47370	50.2	1.4e-45	180.3
Lsi03g01746	.	216	326	Homeobox Transcription Factor Family	AT5G47370	82.1	5.1e-43	171.8
Lsi05g00810	.	109	277	Homeobox Transcription Factor Family	AT5G47370	60.1	1.5e-42	170.2
Lsi06g01229	.	139	254	Homeobox Transcription Factor Family	AT5G47370	68.1	1.6e-36	150.2
Lsi01g00857	.	1	263	Homeobox Transcription Factor Family	AT4G37790	64.0	1.0e-83	307.0
Lsi05g00810	.	1	277	Homeobox Transcription Factor Family	AT4G37790	59.4	9.4e-74	273.9
Lsi04g01446	.	1	280	Homeobox Transcription Factor Family	AT4G37790	51.9	1.4e-56	216.9
Lsi03g01746	.	184	349	Homeobox Transcription Factor Family	AT4G37790	64.3	5.0e-51	198.4
Lsi07g01279	.	4	228	Homeobox Transcription Factor Family	AT4G37790	50.8	8.5e-51	197.6
Lsi02g02612	.	152	311	Homeobox Transcription Factor Family	AT4G37790	63.2	1.6e-49	193.4
Lsi05g02181	.	182	296	Homeobox Transcription Factor Family	AT4G37790	78.3	1.4e-45	180.3
Lsi06g01229	.	139	254	Homeobox Transcription Factor Family	AT4G37790	72.4	1.6e-41	166.8
Lsi05g02181	.	43	340	Homeobox Transcription Factor Family	AT3G60390	57.8	5.6e-75	278.1
Lsi07g01279	.	2	268	Homeobox Transcription Factor Family	AT3G60390	55.4	1.9e-70	263.1
Lsi02g02612	.	144	289	Homeobox Transcription Factor Family	AT3G60390	70.4	2.4e-49	193.0
Lsi01g00857	.	70	227	Homeobox Transcription Factor Family	AT3G60390	63.1	4.5e-48	188.7
Lsi05g00810	.	96	244	Homeobox Transcription Factor Family	AT3G60390	65.8	4.2e-46	182.2
Lsi03g01746	.	216	338	Homeobox Transcription Factor Family	AT3G60390	75.8	5.5e-46	181.8
Lsi06g01229	.	139	257	Homeobox Transcription Factor Family	AT3G60390	68.9	5.3e-41	165.2
Lsi04g01446	.	116	237	Homeobox Transcription Factor Family	AT3G60390	64.8	4.2e-38	155.6
Lsi01g00857	.	1	263	Homeobox Transcription Factor Family	AT2G22800	60.8	7.6e-76	280.8
Lsi05g00810	.	1	277	Homeobox Transcription Factor Family	AT2G22800	56.5	2.8e-70	262.3
Lsi04g01446	.	1	280	Homeobox Transcription Factor Family	AT2G22800	52.0	4.9e-59	224.9
Lsi02g02612	.	149	311	Homeobox Transcription Factor Family	AT2G22800	59.9	2.7e-49	192.6
Lsi07g01279	.	4	228	Homeobox Transcription Factor Family	AT2G22800	52.8	6.0e-49	191.4
Lsi03g01746	.	216	326	Homeobox Transcription Factor Family	AT2G22800	79.3	1.6e-46	183.3
Lsi05g02181	.	182	296	Homeobox Transcription Factor Family	AT2G22800	74.8	7.6e-44	174.5
Lsi06g01229	.	136	254	Homeobox Transcription Factor Family	AT2G22800	69.7	5.7e-39	158.3
Lsi09g01939	CCT,ECH	1	854	Homeobox Transcription Factor Family	AT3G61150	62.0	1.3e-272	936.0
Lsi05g01248	.	55	781	Homeobox Transcription Factor Family	AT3G61150	58.5	1.3e-232	803.1
Lsi05g02010	CCT,ECH	38	732	Homeobox Transcription Factor Family	AT3G61150	59.5	9.2e-231	797.0
Lsi01g00412	CCT	64	544	Homeobox Transcription Factor Family	AT3G61150	52.3	7.8e-137	485.0
Lsi04g01445	CCT	45	354	Homeobox Transcription Factor Family	AT4G08150	65.4	4.7e-111	398.3
Lsi08g01559	CCT	112	396	Homeobox Transcription Factor Family	AT4G08150	65.4	8.3e-100	360.9
Lsi01g00456	.	97	347	Homeobox Transcription Factor Family	AT4G08150	57.4	2.2e-76	283.1
Lsi11g01422	CCT,ECH	90	321	Homeobox Transcription Factor Family	AT4G08150	59.2	1.6e-71	266.9
Lsi04g02098	.	126	493	Homeobox Transcription Factor Family	AT5G25220	71.2	7.1e-134	474.2
Lsi08g01229	.	175	416	Homeobox Transcription Factor Family	AT5G25220	72.0	9.4e-110	394.0
Lsi04g02098	.	167	492	Homeobox Transcription Factor Family	AT5G11060	73.1	1.6e-127	453.0
Lsi08g01229	.	163	415	Homeobox Transcription Factor Family	AT5G11060	69.2	8.5e-105	377.5
Lsi04g02098	.	77	478	Homeobox Transcription Factor Family	AT4G32040	53.7	3.0e-107	385.6
Lsi04g00565	.	1	430	Homeobox Transcription Factor Family	AT1G23380	52.2	2.6e-107	385.6
Lsi11g00638	.	59	297	Homeobox Transcription Factor Family	AT1G23380	53.1	3.1e-68	255.8
Lsi04g01445	CCT	104	329	Homeobox Transcription Factor Family	AT1G23380	50.8	9.1e-60	227.6
Lsi08g01663	.	11	185	Homeobox Transcription Factor Family	AT1G23380	56.3	5.2e-47	185.3
Lsi04g02098	.	176	492	Homeobox Transcription Factor Family	AT1G62990	57.6	1.6e-92	336.3
Lsi08g01229	.	175	415	Homeobox Transcription Factor Family	AT1G62990	55.5	1.6e-76	283.1
Lsi09g00319	.	1	148	Homeobox Transcription Factor Family	AT1G62990	69.6	9.2e-48	187.6
Lsi04g00442	.	4	304	Homeobox Transcription Factor Family	AT1G26960	54.7	6.8e-63	237.7
Lsi02g01495	.	1	293	Homeobox Transcription Factor Family	AT3G01220	52.3	6.7e-51	198.0
Lsi02g00024	.	1	795	Homeobox Transcription Factor Family	AT1G17920	53.2	3.2e-208	721.8
Lsi02g00024	.	20	794	Homeobox Transcription Factor Family	AT1G73360	56.4	6.8e-225	777.3
Lsi05g00276	.	792	1470	Homeobox Transcription Factor Family	AT1G73360	51.6	2.9e-191	665.6
Lsi10g00143	.	77	772	Homeobox Transcription Factor Family	AT1G05230	72.8	1.4e-275	945.7
Lsi11g01463	.	49	622	Homeobox Transcription Factor Family	AT1G05230	60.9	2.7e-226	781.9
Lsi09g01939	CCT,ECH	111	854	Homeobox Transcription Factor Family	AT1G05230	54.4	4.4e-208	721.5
Lsi01g00412	CCT	20	547	Homeobox Transcription Factor Family	AT1G05230	65.7	8.0e-194	674.1
Lsi02g00624	CCT	59	662	Homeobox Transcription Factor Family	AT1G05230	54.6	8.9e-193	670.6
Lsi05g02010	CCT,ECH	104	733	Homeobox Transcription Factor Family	AT1G05230	51.7	1.5e-171	600.1
Lsi07g00984	.	1	139	Homeobox Transcription Factor Family	AT1G05230	80.4	4.8e-53	206.5
Lsi01g00699	.	9	216	Homeobox Transcription Factor Family	AT2G18550	50.5	4.0e-43	171.8
Lsi10g00143	.	93	772	Homeobox Transcription Factor Family	AT2G32370	51.8	2.2e-183	639.4
Lsi05g01248	.	33	782	Homeobox Transcription Factor Family	AT5G52170	51.5	6.0e-199	691.0
Lsi09g01939	CCT,ECH	105	851	Homeobox Transcription Factor Family	AT5G52170	50.6	4.0e-195	678.3
Lsi05g02010	CCT,ECH	104	731	Homeobox Transcription Factor Family	AT5G52170	51.2	1.6e-175	613.2
Lsi01g00699	.	61	214	Homeobox Transcription Factor Family	AT5G66700	55.8	4.0e-38	155.2
Lsi01g00290	.	10	1510	Homeobox Transcription Factor Family	AT1G28420	51.9	0.0e+00	1147.1
Lsi03g01817	.	181	454	Homeobox Transcription Factor Family	AT2G16400	57.6	1.9e-77	287.0
Lsi02g02721	.	186	478	Homeobox Transcription Factor Family	AT2G16400	52.9	2.1e-73	273.5
Lsi03g02150	CCT,ECH	163	326	Homeobox Transcription Factor Family	AT2G35940	53.7	3.3e-48	190.3
Lsi01g01043	.	413	574	Homeobox Transcription Factor Family	AT4G34610	63.6	1.2e-53	208.0
Lsi03g00020	.	549	746	Homeobox Transcription Factor Family	AT4G34610	53.0	8.4e-47	185.3
Lsi10g00143	.	53	770	Homeobox Transcription Factor Family	AT4G04890	65.1	1.4e-257	885.9
Lsi02g00624	CCT	32	662	Homeobox Transcription Factor Family	AT4G04890	59.0	1.1e-219	760.0
Lsi11g01463	.	88	622	Homeobox Transcription Factor Family	AT4G04890	67.5	4.2e-214	741.5
Lsi01g00412	CCT	5	544	Homeobox Transcription Factor Family	AT4G04890	71.5	4.2e-214	741.5
Lsi09g01939	CCT,ECH	105	853	Homeobox Transcription Factor Family	AT4G04890	54.0	3.6e-213	738.4
Lsi05g01248	.	50	780	Homeobox Transcription Factor Family	AT4G04890	51.3	1.8e-196	682.9
Lsi05g02010	CCT,ECH	104	732	Homeobox Transcription Factor Family	AT4G04890	50.7	1.6e-176	616.7
Lsi07g00984	.	1	139	Homeobox Transcription Factor Family	AT4G04890	68.4	1.2e-46	185.3
Lsi06g01202	.	140	571	Homeobox Transcription Factor Family	AT4G29940	60.5	3.4e-142	502.7
Lsi10g01265	.	1	773	Homeobox Transcription Factor Family	AT5G60690	75.6	0.0e+00	1238.4
Lsi01g00085	.	1	847	Homeobox Transcription Factor Family	AT5G60690	69.0	0.0e+00	1137.1
Lsi02g00942	.	1	850	Homeobox Transcription Factor Family	AT5G60690	64.4	3.9e-314	1073.9
Lsi03g00048	.	1	768	Homeobox Transcription Factor Family	AT5G60690	72.0	3.2e-311	1064.3
Lsi02g02997	.	9	995	Homeobox Transcription Factor Family	AT5G60690	55.6	9.8e-292	999.6
Lsi04g02325	.	20	911	Homeobox Transcription Factor Family	AT5G60690	53.8	1.0e-264	909.8
Lsi01g00456	.	86	350	Homeobox Transcription Factor Family	AT1G62360	79.9	9.4e-117	417.2
Lsi11g01422	CCT,ECH	85	336	Homeobox Transcription Factor Family	AT1G62360	71.3	9.4e-101	364.0
Lsi04g01445	CCT	108	333	Homeobox Transcription Factor Family	AT1G62360	55.7	2.6e-66	249.6
Lsi11g00638	.	60	299	Homeobox Transcription Factor Family	AT1G62360	52.0	2.1e-60	229.9

Syn-Orthogroups

Select	Orthogroup	Bda	Bhi	Blo	Bma	Bpe	Cam	Car	Cco	Cec	Chy	Cla	Clacu	Cma	Cme	Cmetu	Cmo	Cmu	Cone	Cpe	Cre	Csa	HCH	Hepe	Lac	Lcy	Lsi	Mch	Sed	Tan	Vvi	Total
	OG0000957	1	7	2	1	2	2	4	2	2	2	2	2	4	2	2	4	2	2	4	2	2	2	2	3	3	2	2	12	5	1	85

Regulatory proteins

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	25799	PF03791	KNOX2	1.70E-19	No_clan	Lsi	TF

Transcriptome

Select	Gene	Chr	Type	da1	da2	da3	da4	da5	da6	da7	da8	da9	da10
	Lsi08g01229	Lsi_Chr08	FPKM	0.26981	0.648505	6.811241	7.296679	3.911088	4.753054	4.184326	0.72703	0.733232	0.735509