Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi08g01251 | ATGGCATTAAACGACGACGCATCGAGGAAGACAACGGGGTCGGTATTAAGCCAAAAGAGAAACCTTCCTTTGAGCAACACCGGCATGGCTATTGCTGCCACTCTCCTCCTCGGAATCGGCTACATGGTTTATAAGAAGAAAGATCCCATTCCCATTCATCGTCATCATCCATCCATGGCTGGTTTTTCAAGGGCTTTGTTTCTTCTCACATTTTTCCTCTTCAGCTTCTCCGAAGCTAGAGAGATCTTGGTCGGGGGCAAATCCAATGCCTGGAAAATCCCTTCTTCTCAATCTCAATCTCTCAATCAATGGGCTGAAACCTCCCGCTTTCGCGTCGGCGATACTCTCGTGTGGAATTACGAAGAAGGGAAAGATTCGGTACTGAAAGTGAGGAAGGAAGATTATGAAGCCTGCAATACCGAAAACCCAGAACAGATATTTGAGGATGGGAATACGAAAGTGGAGCTACACAAACCAGGCCCATTTTATTTCATCAGTGGGGCAAATGGTCACTGCGAGCAGGGCCAGAAGCTGATTGTTGTGGTTGTGACTCCTCGCCGAAGGTTCATAGGCATCTCTCCGGCGCCTTCTCCGGCGGAGAGTGAGGGTCCAGCAGTTGCTCCGTCGAGTGGAGCTGCAAATTTGAAGGTTGGGTTTTTGGCGGTAATTGTCGGAATTTTGGGTGTTGGAGTTGGATTGCTGTGA | 705 | 48.79 | MALNDDASRKTTGSVLSQKRNLPLSNTGMAIAATLLLGIGYMVYKKKDPIPIHRHHPSMAGFSRALFLLTFFLFSFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRVGDTLVWNYEEGKDSVLKVRKEDYEACNTENPEQIFEDGNTKVELHKPGPFYFISGANGHCEQGQKLIVVVVTPRRRFIGISPAPSPAESEGPAVAPSSGAANLKVGFLAVIVGILGVGVGLL | 234 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 20976998 | 20979817 | + | Lsi08G012510.1 | Lsi08g01251 | 669177 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi08g01251 | 234 | CDD | OsENODL1_like | 80 | 182 | IPR041846 | - | |
Lsi08g01251 | 234 | PANTHER | BLUE COPPER PROTEIN | 53 | 230 | IPR039391 | GO:0009055 | |
Lsi08g01251 | 234 | Pfam | Plastocyanin-like domain | 91 | 176 | IPR003245 | GO:0009055 | |
Lsi08g01251 | 234 | ProSiteProfiles | Phytocyanin domain profile. | 80 | 184 | IPR003245 | GO:0009055 | |
Lsi08g01251 | 234 | Gene3D | - | 78 | 186 | IPR008972 | - | |
Lsi08g01251 | 234 | PANTHER | EARLY NODULIN-LIKE PROTEIN 3 | 53 | 230 | - | - | |
Lsi08g01251 | 234 | SUPERFAMILY | Cupredoxins | 79 | 183 | IPR008972 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Lsi04g02065 | Lsi08g01251 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi05g00619 | Lsi-Chr5:7619886 | Lsi08g01251 | Lsi-Chr8:20976998 | 4.20E-31 | dispersed | |
Lsi07g01117 | Lsi-Chr7:16596660 | Lsi08g01251 | Lsi-Chr8:20976998 | 1.20E-20 | dispersed | |
Lsi08g01251 | Lsi-Chr8:20976998 | Lsi10g01609 | Lsi-Chr10:20579312 | 2.98E-27 | dispersed | |
Lsi04g02065 | Lsi-Chr4:27778890 | Lsi08g01251 | Lsi-Chr8:20976998 | 4.69E-28 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi08g01251 | - | - | csv:101210664 | 265.774 |