Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi08g01251 ATGGCATTAAACGACGACGCATCGAGGAAGACAACGGGGTCGGTATTAAGCCAAAAGAGAAACCTTCCTTTGAGCAACACCGGCATGGCTATTGCTGCCACTCTCCTCCTCGGAATCGGCTACATGGTTTATAAGAAGAAAGATCCCATTCCCATTCATCGTCATCATCCATCCATGGCTGGTTTTTCAAGGGCTTTGTTTCTTCTCACATTTTTCCTCTTCAGCTTCTCCGAAGCTAGAGAGATCTTGGTCGGGGGCAAATCCAATGCCTGGAAAATCCCTTCTTCTCAATCTCAATCTCTCAATCAATGGGCTGAAACCTCCCGCTTTCGCGTCGGCGATACTCTCGTGTGGAATTACGAAGAAGGGAAAGATTCGGTACTGAAAGTGAGGAAGGAAGATTATGAAGCCTGCAATACCGAAAACCCAGAACAGATATTTGAGGATGGGAATACGAAAGTGGAGCTACACAAACCAGGCCCATTTTATTTCATCAGTGGGGCAAATGGTCACTGCGAGCAGGGCCAGAAGCTGATTGTTGTGGTTGTGACTCCTCGCCGAAGGTTCATAGGCATCTCTCCGGCGCCTTCTCCGGCGGAGAGTGAGGGTCCAGCAGTTGCTCCGTCGAGTGGAGCTGCAAATTTGAAGGTTGGGTTTTTGGCGGTAATTGTCGGAATTTTGGGTGTTGGAGTTGGATTGCTGTGA 705 48.79 MALNDDASRKTTGSVLSQKRNLPLSNTGMAIAATLLLGIGYMVYKKKDPIPIHRHHPSMAGFSRALFLLTFFLFSFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRVGDTLVWNYEEGKDSVLKVRKEDYEACNTENPEQIFEDGNTKVELHKPGPFYFISGANGHCEQGQKLIVVVVTPRRRFIGISPAPSPAESEGPAVAPSSGAANLKVGFLAVIVGILGVGVGLL 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 20976998 20979817 + Lsi08G012510.1 Lsi08g01251 669177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi08g01251 234 CDD OsENODL1_like 80 182 IPR041846 -
Lsi08g01251 234 PANTHER BLUE COPPER PROTEIN 53 230 IPR039391 GO:0009055
Lsi08g01251 234 Pfam Plastocyanin-like domain 91 176 IPR003245 GO:0009055
Lsi08g01251 234 ProSiteProfiles Phytocyanin domain profile. 80 184 IPR003245 GO:0009055
Lsi08g01251 234 Gene3D - 78 186 IPR008972 -
Lsi08g01251 234 PANTHER EARLY NODULIN-LIKE PROTEIN 3 53 230 - -
Lsi08g01251 234 SUPERFAMILY Cupredoxins 79 183 IPR008972 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Lsi04g02065 Lsi08g01251 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi05g00619 Lsi-Chr5:7619886 Lsi08g01251 Lsi-Chr8:20976998 4.20E-31 dispersed
Lsi07g01117 Lsi-Chr7:16596660 Lsi08g01251 Lsi-Chr8:20976998 1.20E-20 dispersed
Lsi08g01251 Lsi-Chr8:20976998 Lsi10g01609 Lsi-Chr10:20579312 2.98E-27 dispersed
Lsi04g02065 Lsi-Chr4:27778890 Lsi08g01251 Lsi-Chr8:20976998 4.69E-28 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi08g01251 - - csv:101210664 265.774