Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi08g01289 | ATGGAAGGAAGTTCAAAGCTTAGCCATTTGTTGGTGACAGTATTTCTATACACTTTAGCAACCATGACGGCCTTTCCAGCCATTACAGATGTCACCATGTCCGCTCTCTGTCCCGGTCAAGACGAGTGTTCTCTCGCTATTTATTTCACCGGCTTTCAACAAGTCGTGACTGGAATTGGTGCGTTGCTCATGGTGCCGTTGCTCGGAAACCTATCGGATAAGTTTGGGAGGAAGACTATTCTCACCATTCCATTGGTTCTCACCGTAATTCCCCTCGGGATATTGGGATATGGGAGGTCGAGAAGTTTGTTTTACGTTTATTTTGTGTTGAAGTGTGTGACGAGTACGGTTTGTGAAGGGAGCGTTCAGTGCTTGGCCGTCGCCTACGCGGCCGATAATGTACCGGAACACCAGCGAGCTTCTGCATTCGGAATGCTATCCGCCATTATCTCTTCTGCTTCCGTCTGCGGGACTCTCTGTGCTCGTTTTCTCTCCATTCCATCCACTTTTCAGGCAGCGGCTTCCACTGCGGCTGTGGCGGCAGTGTATATGAGGGTCTTCCTTACTGATTCTGCCGCCGATTGCAATCTTTCTGCTCCCTTACTTTCTGGGGAAAATGTAGAATCTGTTTCTTCGGATCCAATTTCGTCTAAAAAGGAAAAACATACTACGAACTTGCCTTCACTGACGGACCTTTTTTCCCTCTTGACATTTTCACAAGCGGCCGTTGTTGCATTTTTTAGCAATCTTGCTGATGTCGGGCATCATGCTTCAATAATGGTTAGTCTTTTGATCCAGGGATCTAATCTGGTCGTTGATGATCACCCTTGTCTTGCTCAGATTTACTATTTAAAAGCCAAATTTCACTTTGACAAGGATAAAATTGCTGATTTGATGGTGATTTCTGGGGCTGCTTCGACTATTTCACAGGCATGTCATACTATTTTATTTTACTTTCTACTTTTAATGCCCATCTTGGTTCCTGCTCTAGGAGAGAATAGGCTACTCTCAGTTGGGGTCTTTTTCAACTGCATTCATATGCTTCTTCACAGCTTAGCTTGGTCTGAATGGGTTTCCTATGTTGCTGCAATGTTTTCCATTCTGTATATTTTCTGGCAGCCTTGTCTGCAAAGCATAGTGTCGAAACAAGTTGGGGCAAGCGAGCAGGGTAAGGCTCAAGGATGCATTTCAGGGATATCTTCATTTGCCAATGTTGTTTCTCCATTTGTATTCTCCCCTTTAGCAGCTTTGTTTCTCTCTGATAACGCTCCATTTCATTTCCCTGGATTTAGCATCATGTGCGCTGGATCTGCTGCGATGATAGCATTTATTCAGAGTATGATGATAAGGCCTCCTACCAAAGCTTGTAGCAGCAGCCATGTGGAGGCATACAATTTAAATAAAAAAGGCAGTTTGATTCAGATCGGATTTGCGCCACGTGTCCGGTCTTTAAATAGCATGTCAAAATCAAAGCCCCAAAAGCTTTCACCTTCAAACCCCCAACCCCTTACCCAATTTTCTATTATATCATTTTTTCCCTCGTTTTTCTCTGCTCCGCCCTTCGCCGTTGGCTGCGTCGGAGACCACCGGAAACCGCCGTCTCTGCCTCTTAACAGACGCCGTTTCCTCCATTCAGCTTTTCGCCGTCGTGTTCCTCCGGTGTTAGCCAACGGCTTGTATTCTCAATATCCTCTTAACGCCCTCCATTTTTTGATTTCCGATTATATTGACTCAACTTGCTCTCTACGATTGCTGAGTTTCTTCATCTGCATTTTGGTTGATCCATCTTCATTTTCGTTTCTGGAATTGGTGTTTGGTTTTTGTTCGGCGATAATGAATGGTCATGATGTGGAGCCGTTGGTGTACGTTCACGGCGACCTCGATTTGAAGATCATTGAGGCGCGCCGTTTGCCTAATATGGATTTGCTATCCGAACGTATTCGACGGTTTTTTACCGTTTTTAGTTCTTGTCGGAAACCGTTTTCCAAGAAGAAGGATAAAGATGATCACCAGCACCACCGGAAGATAATTACTAGTGATCCTTACGTCACCGTTTGTCTTGCTGGAGCGACGGTTGCTCGGACACGAGTTATTTCGAACTCGCAGAACCCTATCTGGAATGAGCACTTCAAAATCCCTCTTGCTCATCCGGTATCGCAGGTGGAGTTTCATGTCAAGGATAACGATGTGTTTGGGGCGGATTTGATTGGTATTGCAACGGTCCCTGCGCGCAGAGTTCTTTCTGGCGAAACCATAGATGATTGGTTTCCGATTATCGGTTCGTTTGGGAAACCGCCGAAGCCGGATTCGGCTGTGCGTTTGGTAATGAAATTCACCAAGTGCGAGGACAATCCTCTGTACCGTTATGGCATTGCGGCCGATCCCGAACATTTTGGCGTTCGGAATTGCTATTTTCCGGTACGGCATGGGGGTTCGGTAACGCTTTATCAGGATGCGCACGTTCCTGATTCCATGTTGGAGAAGATTGAATTGGAAAAGGGGAAAGTGTATCGGCATGAGAATTGCTGGGAGGATATATGCCATGCAATTTTGGAGGCTCACCATTTAGTCTACATCGCCGGTTGGTCCATTTATCATAAGGTGAAGCTGGTGAGAGAGCCTTCGAAGCCGTTGCCTAATGGTGGGAATTTGAACTTGGGAGAGTTGCTCAAGTACAAGTCACAAGAAGGTGTGCGAGTCTTGCTATTGGTTTGGGATGACAAGACCTCCCACAGCAAATTCTTCATTAATACGGTGCGAGTGGGTTTGTGCTCTGTATGGCATCTGGCTTGTGAAATTTCTCAAATTTGTCAGTTTATGAAACCAATAGCAGTAATTTGTGAAGAAGCTCAGTGTCCTCTAACTGGAGTGATGCAGACTCATGATGAGGAGACCCGGAAGTTTTTTAAGCACTCTTCTGTGTCATGTGTGCTGTCACCCCGATATGCCAGCAGTAAGCTTAGCATTTTTAAGCAACAGGCACGCTTTATACCATGTCTCACTACGTATAATGTAGAAATCAGTAAATTTCTGAAGGAACATGACTCATTAGTTGCAGTTTACTCTCCCTCTTGCCATTTGCACCATTTAGATTTAAAATTTTATTATATATTTTCACTTGCCTTGGAACAGCGTGCAATTGACTTGAGGGTTGTTGGAACGCTTTTCACCCATCATCAGAAGTGCGTGATTGTGGATACACAAGCCTCTGGAAATTACCGGAAAATAAGTTCTTTTATTGGAGGACTTGACCTTTGCGATGGTCGTTATGATACTCCTGAGCATCGGTTGTTAAAAGATCTTGACACTGTATTTGATGATGATTATCACAATCCAACTTTTTCTGCAGGTACAAAGGGTCCTCGGCAGCCATGGCATGATTTACATTGCAAAATTGAAGGGCCTGCAGCATACGATGTGCTTACTAACTTTGAACAACGATGGCGAAAAGCCACAAAATGGTCTGAATTAGGTCAGCGGTTCAAAAGGGTATCACATTGGCATGAAGATGCTTTAATAAAGTTGGAACGCATATCTTGGATACTTAGTCCATCTCAGTCAGTCCCCAACGATGATCCTTTGTTATGGGTTTCCAAGGAAAATGATCCTGGCAATTGGCATGTTCAGGTTTTCCGGTCAATAGATTCAGGATCTTTGAAAGGATTTCCCAAAGATGTTTTTCAAGCTGAGTTGCAGAATCTGGTTTGTGCAAAAAATTTGGTTATTGACAAAAGCATTCAAACAGCATATATTCAAGCAATAAGATCTGCCCAACACTTCATTTACATTGAGAATCAGTATTTTCTTGGATCGTCATTTGCATGGCCTTCGTACAAAGAAGCAGGTGCTGATAATCTTATTCCTATGGAATTGGCGTTGAAGATTGCTAGTAAGATAAGAGCGAATGAGAGGTTTGCTGTCTACATTGTGATACCAATGTGGCCTGAAGGGGTTCCCACTTCTGTTTCTGTGCAAGAAATCCTATTTTGGCAGGGTCAGACAATCCAAATGATGTACGAAGTCATTGGACGAGAGTTGAAATATAAGAATCTCGAGAACGCTCATCCCTCAGACTACTTAAACTTTTACTGTCTTGGCAATAGGGAAGCGCATGAGGACTTGACATGTTCCTCTGGTCATTCTTCCAAGAGCGAAGATGTGACTTATAGAGTTGGCATATTTGACAAATGGTTCTCTGATTTCATAAATGGTCCAATGGTGTCGCTTCAGCCTAAAATTGGCGTTTCAGACTCACAAAAGTTCCGTAGATTCATGATATATGTGCATGCGAAAGGAATGATTGTTGATGATGAGTATGTAATAGTAGGGTCTGCAAATATAAATCAAAGATCAATGGCTGGTTCAAGGGACACTGAGATTGCCATGGGTGCATATCAACCCAGTTACACATGGGGTAAGAAGAAACAACATCCACGAGGCCAGATTTATGGCTATAGAATGTCGCTCTGGGCTGAACATTTGGGAAACATTGACGATTGCTTCAAGGAGGCAGAAAGTTTGACTTGTGTGAAGGCAGTCAACAAGATAGCTGAAGATAACTGGAAGAAATACACAGCAACGGAATTTGCGCCATTGCAAGGGCACCTCCTCAAGTACCCGATCGAGGTCAGCCAAAGTGGGAAGATAGGTCCGTTGACTGGACACGAGACTTTTCCTGACTTTGGTGGTAAGGTCCTTGGAGCTCGATCTAACCTTCCTGATGCTCTTACTACATAA | 4737 | 44.06 | MEGSSKLSHLLVTVFLYTLATMTAFPAITDVTMSALCPGQDECSLAIYFTGFQQVVTGIGALLMVPLLGNLSDKFGRKTILTIPLVLTVIPLGILGYGRSRSLFYVYFVLKCVTSTVCEGSVQCLAVAYAADNVPEHQRASAFGMLSAIISSASVCGTLCARFLSIPSTFQAAASTAAVAAVYMRVFLTDSAADCNLSAPLLSGENVESVSSDPISSKKEKHTTNLPSLTDLFSLLTFSQAAVVAFFSNLADVGHHASIMVSLLIQGSNLVVDDHPCLAQIYYLKAKFHFDKDKIADLMVISGAASTISQACHTILFYFLLLMPILVPALGENRLLSVGVFFNCIHMLLHSLAWSEWVSYVAAMFSILYIFWQPCLQSIVSKQVGASEQGKAQGCISGISSFANVVSPFVFSPLAALFLSDNAPFHFPGFSIMCAGSAAMIAFIQSMMIRPPTKACSSSHVEAYNLNKKGSLIQIGFAPRVRSLNSMSKSKPQKLSPSNPQPLTQFSIISFFPSFFSAPPFAVGCVGDHRKPPSLPLNRRRFLHSAFRRRVPPVLANGLYSQYPLNALHFLISDYIDSTCSLRLLSFFICILVDPSSFSFLELVFGFCSAIMNGHDVEPLVYVHGDLDLKIIEARRLPNMDLLSERIRRFFTVFSSCRKPFSKKKDKDDHQHHRKIITSDPYVTVCLAGATVARTRVISNSQNPIWNEHFKIPLAHPVSQVEFHVKDNDVFGADLIGIATVPARRVLSGETIDDWFPIIGSFGKPPKPDSAVRLVMKFTKCEDNPLYRYGIAADPEHFGVRNCYFPVRHGGSVTLYQDAHVPDSMLEKIELEKGKVYRHENCWEDICHAILEAHHLVYIAGWSIYHKVKLVREPSKPLPNGGNLNLGELLKYKSQEGVRVLLLVWDDKTSHSKFFINTVRVGLCSVWHLACEISQICQFMKPIAVICEEAQCPLTGVMQTHDEETRKFFKHSSVSCVLSPRYASSKLSIFKQQARFIPCLTTYNVEISKFLKEHDSLVAVYSPSCHLHHLDLKFYYIFSLALEQRAIDLRVVGTLFTHHQKCVIVDTQASGNYRKISSFIGGLDLCDGRYDTPEHRLLKDLDTVFDDDYHNPTFSAGTKGPRQPWHDLHCKIEGPAAYDVLTNFEQRWRKATKWSELGQRFKRVSHWHEDALIKLERISWILSPSQSVPNDDPLLWVSKENDPGNWHVQVFRSIDSGSLKGFPKDVFQAELQNLVCAKNLVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSFAWPSYKEAGADNLIPMELALKIASKIRANERFAVYIVIPMWPEGVPTSVSVQEILFWQGQTIQMMYEVIGRELKYKNLENAHPSDYLNFYCLGNREAHEDLTCSSGHSSKSEDVTYRVGIFDKWFSDFINGPMVSLQPKIGVSDSQKFRRFMIYVHAKGMIVDDEYVIVGSANINQRSMAGSRDTEIAMGAYQPSYTWGKKKQHPRGQIYGYRMSLWAEHLGNIDDCFKEAESLTCVKAVNKIAEDNWKKYTATEFAPLQGHLLKYPIEVSQSGKIGPLTGHETFPDFGGKVLGARSNLPDALTT | 1578 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 21243604 | 21261317 | - | Lsi08G012890.1 | Lsi08g01289 | 669215 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi08g01289 | 1578 | SMART | pld_4 | 1054 | 1089 | IPR001736 | GO:0003824 | |
Lsi08g01289 | 1578 | SMART | pld_4 | 1424 | 1451 | IPR001736 | GO:0003824 | |
Lsi08g01289 | 1578 | Gene3D | Endonuclease Chain A | 1225 | 1470 | - | - | |
Lsi08g01289 | 1578 | Gene3D | Endonuclease Chain A | 1007 | 1172 | - | - | |
Lsi08g01289 | 1578 | ProSiteProfiles | C2 domain profile. | 607 | 756 | IPR000008 | - | |
Lsi08g01289 | 1578 | Gene3D | MFS general substrate transporter like domains | 5 | 448 | IPR036259 | - | |
Lsi08g01289 | 1578 | CDD | C2_plant_PLD | 621 | 779 | - | - | |
Lsi08g01289 | 1578 | Pfam | Phospholipase D C terminal | 1498 | 1568 | IPR024632 | - | |
Lsi08g01289 | 1578 | Pfam | Phospholipase D Active site motif | 1055 | 1089 | IPR001736 | GO:0003824 | |
Lsi08g01289 | 1578 | Pfam | Phospholipase D Active site motif | 1425 | 1451 | IPR001736 | GO:0003824 | |
Lsi08g01289 | 1578 | SUPERFAMILY | Phospholipase D/nuclease | 1243 | 1500 | - | - | |
Lsi08g01289 | 1578 | CDD | MFS_SLC46_TetA_like | 10 | 448 | - | - | |
Lsi08g01289 | 1578 | PANTHER | PHOSPHOLIPASE D | 1001 | 1577 | - | - | |
Lsi08g01289 | 1578 | PANTHER | PHOSPHOLIPASE D | 617 | 921 | - | - | |
Lsi08g01289 | 1578 | PANTHER | PHOSPHOLIPASE D | 955 | 994 | - | - | |
Lsi08g01289 | 1578 | Pfam | C2 domain | 625 | 758 | IPR000008 | - | |
Lsi08g01289 | 1578 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 624 | 779 | IPR035892 | - | |
Lsi08g01289 | 1578 | PANTHER | PHOSPHOLIPASE D | 1001 | 1577 | IPR015679 | - | |
Lsi08g01289 | 1578 | PANTHER | PHOSPHOLIPASE D | 617 | 921 | IPR015679 | - | |
Lsi08g01289 | 1578 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 1 | 192 | IPR020846 | GO:0022857 | |
Lsi08g01289 | 1578 | SMART | C2_3c | 626 | 755 | IPR000008 | - | |
Lsi08g01289 | 1578 | Gene3D | C2 domain | 623 | 786 | IPR035892 | - | |
Lsi08g01289 | 1578 | Pfam | Major Facilitator Superfamily | 10 | 408 | IPR011701 | GO:0022857|GO:0055085 | |
Lsi08g01289 | 1578 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 1054 | 1089 | IPR001736 | GO:0003824 | |
Lsi08g01289 | 1578 | PANTHER | PHOSPHOLIPASE D | 955 | 994 | IPR015679 | - | |
Lsi08g01289 | 1578 | SUPERFAMILY | MFS general substrate transporter | 15 | 453 | IPR036259 | - | |
Lsi08g01289 | 1578 | SUPERFAMILY | Phospholipase D/nuclease | 806 | 1160 | - | - | |
Lsi08g01289 | 1578 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 1424 | 1451 | IPR001736 | GO:0003824 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi08g01289 | Lsi-Chr8:21243604 | Lsi09g01919 | Lsi-Chr9:28031240 | 0 | dispersed | |
Lsi10g00817 | Lsi-Chr10:11209635 | Lsi08g01289 | Lsi-Chr8:21243604 | 1.51E-25 | dispersed | |
Lsi08g01289 | Lsi-Chr8:21243604 | Lsi08g01290 | Lsi-Chr8:21270174 | 4.04E-124 | tandem | |
Lsi01g00563 | Lsi-Chr1:4495939 | Lsi08g01289 | Lsi-Chr8:21243604 | 0 | wgd | |
Lsi11g01219 | Lsi-Chr11:20777835 | Lsi08g01289 | Lsi-Chr8:21243604 | 1.06E-120 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi08g01289 | K01115 | - | csv:101213442 | 1570.44 |