Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi08g01356 AGACCCCATCATTTTTTTATTCCCCAATGGGACCCTCCCAATTCTTTCCTCTACCCATATTTATACCTCTTCAACCTTCCCTTCTTTCCCCCTCATCCATCACAATCATCACCTTCTTCTTCTTCTTCTTCTTCCTTAAACTCGCCATCGATGGCGGACGCAGGCTCGGTCTCCGACAAAAGAATGTCGTGTTCTATTCCCGAGAGGTTCCAGCTCCATGCCGCCATGTTGGCATTGCAATTCGGCTATGCCGGTTTCCATGTCGTCTCTAGAGCTGCCCTCAACATGGGCATTAGTAAACTCGTCTTCCCTGTCTACCGAAACGTCATCGCTTTGCTCCTCCTCCTTCCCTTCGCATATTTCATCGAGAAGAAGGATAGGCCTACGCTCACTCTCAACTTTGTCCTTCAGTTCTTCCTGCTCGCTCTTGTTGGAATTACAGCCAATCAAGGGTTTTACTTGCTGGGTTTGGATAATACTTCCCCAACCTTTGCTTCTGCTATTCAAAATTCTGTCCCTGCAATTACTTTCCTCATGGCTGCAGTTCTCAGGATTGAGCAAGTGCGACTGAACCGAAAAGATGGGATAGCGAAGGTGATGGGTACAATATGTTGCGTAGCCGGAGCGACGGTGATCACATTATACAAAGGGCCCACCATCTACAGCCCGGCAACGACCACGGTGACGGTGCAGGGGACGGCGGAGGCGGCGGGGATGATGCTGAGCGGGCCGGGAATGTTCCCGTCGCTAGGCGACGCAAAGGGAAAAAGCTGGACGTTAGGGTGTGTGTACTTGATCGGGCACTGCTTGTCGTGGTCGGCGTGGCTAGTCCTACAAGCACCGGTGCTTAAAAAATACCCGGCTCGCCTCTCCGTTACCTCCTTCACTTGCTTCTTTGGGCTCATCCAATTCCTCATCATCGCCATCGCGTTCGAGCGCGACGCTCAGGCTTGGCTCTTCCATTCCGGCGCCGAAGCCTTCAGTATCGTTTATGCTGGGGTGGTGGCTTCGGGGATAGCGTTTGCTGTACAGATATGGTGCATCGACAGAGGTGGCCCGGTTTTCGTTGCTGTTTACCAACCGGTTCAGACCTTTGTTGTTGCTCTCATGGCTTCCCTCGCTTTAGGCGAGGAGTTCTACTTGGGAGGGATCATAGGGGCGGTGCTGATTATATCGGGGCTGTACCTTGTGCTGTGGGGAAAGAGCGAAGAAAAGAAGTTCTTATTGGAAAGAGCAATGATCCAGTCTGCCCCGGACCACGGTAGCAGCCGACCAAGTGGCCACATCAAAACGTCCATAACCCAGCCACTTCTCCATCCTACGGCTGAAAATAATCCGTTTTGTAATCACCCCGGGATTGAATCCATGGGAGTTGCCGCGTTTCGTTTTGGGGTTTCTGTTCTTTTAGTATTCGCTTTTGTGCTTTGTGATTTGGGCGTTTGTAATGGCGGAATCACGAGCAGTTATGTTCGGGATGAACATGTCTCGTCGGATATGCCACTCGATAGCGACGTCTTTAGATCTCCTCCTGGTAAAAATGCCGCTCAACAGGTTCATATAACACAGGGGGATTTTGAGGGGAAGAGTGTGATAATCTCTTGGGTTACACCGGATAAACCAGGTTCAAACAGAGTGGTTTATTGGGCTGAAAACAGTGAGATTAGAAACCATGCTGAAGGCTATTATGTTTCCTACAAGTATTTCAACTATACATCTGGTTACATTCACCACTGCACCATTGACAACTTAGAGTATGATACTAAATACTTCTACGTGATTGGGTTTGGGAGTCTATCACGAAGGTTTTGCTTTACAACCCCTCCTAAAATTGGCCCAGATGTGCCTTATACTTTTGGTCTTATAGGGGATCTTGGTCAAACACATGATTCTAACAGGACACTTACACACTATGAATTAAACCCAACAAAAGGACAGACTATGTTGTTCCTTGGGGACTTGTCTTATGCAGACCGCTATCCATTCCATGATAACACCAGATGGGACACATGGGGGAGGTTTGTGGAAAGAAGTACAGCTTATCAACCTTGGATTTGGACTGCAGGGAATCATGAACTCGATTATGCTCCTGAAATTGGTGAAAGTGAACCATTTAAGCCTTATTTCCATCGTTACCGTGTCCCATATAATGCATCGGAGGGCTCCTCTCACCTTTGGTACTCCATTAAGAGAGCTTCAGCTTATATAATCGTCTTGTCCTCTTACTCATCATATGTGAAAAGCAGCCCTCAGTATAAATGGCTACAGAATGAGCTGCTGAAGGTGAACAGGGACGAGACTCCATGGCTGATAGTTCTTATGCATACTCCAATGTACAGCAGTTATGTTCACCATTACATGGAAGGAGAAAGCATGAGAGTGGTCTTCGAGCCATGGTTCGTAAAATATAAAGTTGATGTTGTCTTTGCCGGTCATGTTCATGCCTACGAACGATCTGAACGAATATCAAATATAGCATACAATGTTGTAAATGGGTTATGTTCTCCAGTTCATGATATAGATGCTCCAGTTTATATAACCATTGGAGATGGTGGAAACTCTGAAGGATTATTAACCGAGATGACTGAACCACAGCCAAACTACTCGGCTTACCGCGAAGCAAGCTTTGGACATGGTACACTGGACATAAAGAACAGAACTCATGCCTACTTTGCTTGGCATAGGAACCAAGACGAATATGCTGTGGAAGCTGATTCCTTTTGGCTGCATAATAGACAATGGATATCATCTATATTGCCAGAATCTTCAGTAATGAGTCGCCTTTCATCAGCAGCCTGA 2796 47.1 RPHHFFIPQWDPPNSFLYPYLYLFNLPFFPPHPSQSSPSSSSSSSLNSPSMADAGSVSDKRMSCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNVIALLLLLPFAYFIEKKDRPTLTLNFVLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAVLRIEQVRLNRKDGIAKVMGTICCVAGATVITLYKGPTIYSPATTTVTVQGTAEAAGMMLSGPGMFPSLGDAKGKSWTLGCVYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSFTCFFGLIQFLIIAIAFERDAQAWLFHSGAEAFSIVYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVALMASLALGEEFYLGGIIGAVLIISGLYLVLWGKSEEKKFLLERAMIQSAPDHGSSRPSGHIKTSITQPLLHPTAENNPFCNHPGIESMGVAAFRFGVSVLLVFAFVLCDLGVCNGGITSSYVRDEHVSSDMPLDSDVFRSPPGKNAAQQVHITQGDFEGKSVIISWVTPDKPGSNRVVYWAENSEIRNHAEGYYVSYKYFNYTSGYIHHCTIDNLEYDTKYFYVIGFGSLSRRFCFTTPPKIGPDVPYTFGLIGDLGQTHDSNRTLTHYELNPTKGQTMLFLGDLSYADRYPFHDNTRWDTWGRFVERSTAYQPWIWTAGNHELDYAPEIGESEPFKPYFHRYRVPYNASEGSSHLWYSIKRASAYIIVLSSYSSYVKSSPQYKWLQNELLKVNRDETPWLIVLMHTPMYSSYVHHYMEGESMRVVFEPWFVKYKVDVVFAGHVHAYERSERISNIAYNVVNGLCSPVHDIDAPVYITIGDGGNSEGLLTEMTEPQPNYSAYREASFGHGTLDIKNRTHAYFAWHRNQDEYAVEADSFWLHNRQWISSILPESSVMSRLSSAA 931
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 21887221 21899752 + Lsi08G013560.1 Lsi08g01356 669282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi08g01356 931 Gene3D - 514 610 - -
Lsi08g01356 931 Gene3D - 611 917 IPR029052 -
Lsi08g01356 931 SUPERFAMILY Purple acid phosphatase, N-terminal domain 496 608 IPR008963 GO:0003993|GO:0046872
Lsi08g01356 931 CDD MPP_PAPs 612 910 IPR041792 -
Lsi08g01356 931 Pfam Iron/zinc purple acid phosphatase-like protein C 841 898 IPR025733 -
Lsi08g01356 931 PANTHER ACID PHOSPHATASE RELATED 466 916 IPR039331 GO:0003993
Lsi08g01356 931 Pfam Purple acid Phosphatase, N-terminal domain 516 606 IPR015914 GO:0003993|GO:0046872
Lsi08g01356 931 SUPERFAMILY Metallo-dependent phosphatases 612 914 IPR029052 -
Lsi08g01356 931 Pfam EamA-like transporter family 260 398 IPR000620 GO:0016020|GO:0016021
Lsi08g01356 931 Pfam EamA-like transporter family 77 213 IPR000620 GO:0016020|GO:0016021
Lsi08g01356 931 MobiDBLite consensus disorder prediction 35 54 - -
Lsi08g01356 931 SUPERFAMILY Multidrug resistance efflux transporter EmrE 303 402 - -
Lsi08g01356 931 Pfam Calcineurin-like phosphoesterase 617 815 IPR004843 GO:0016787
Lsi08g01356 931 CDD FN3 529 606 IPR003961 GO:0005515
Lsi08g01356 931 PANTHER FE(3+)-ZN(2+) PURPLE ACID PHOSPHATASE 12 466 916 - -
Lsi08g01356 931 SUPERFAMILY Multidrug resistance efflux transporter EmrE 106 216 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Lsi04g01711 Lsi08g01356 CCT
Lsi04g01711 Lsi08g01356 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi03g01416 Lsi-Chr3:25111457 Lsi08g01356 Lsi-Chr8:21887221 7.54E-47 dispersed
Lsi04g00524 Lsi-Chr4:4839283 Lsi08g01356 Lsi-Chr8:21887221 1.62E-32 dispersed
Lsi06g01015 Lsi-Chr6:20289060 Lsi08g01356 Lsi-Chr8:21887221 1.13E-155 dispersed
Lsi07g00326 Lsi-Chr7:3468063 Lsi08g01356 Lsi-Chr8:21887221 2.27E-51 dispersed
Lsi08g01356 Lsi-Chr8:21887221 Lsi09g01137 Lsi-Chr9:18260425 2.45E-74 dispersed
Lsi09g00112 Lsi-Chr9:1057080 Lsi08g01356 Lsi-Chr8:21887221 2.79E-47 dispersed
Lsi02g00933 Lsi-Chr2:9130489 Lsi08g01356 Lsi-Chr8:21887221 9.18E-42 transposed
Lsi04g01840 Lsi-Chr4:25522556 Lsi08g01356 Lsi-Chr8:21887221 1.64E-66 transposed
Lsi06g01306 Lsi-Chr6:23624029 Lsi08g01356 Lsi-Chr8:21887221 2.52E-82 transposed
Lsi07g01289 Lsi-Chr7:18831423 Lsi08g01356 Lsi-Chr8:21887221 1.81E-35 transposed
Lsi09g00119 Lsi-Chr9:1142966 Lsi08g01356 Lsi-Chr8:21887221 1.93E-29 transposed
Lsi01g00633 Lsi-Chr1:5101431 Lsi08g01356 Lsi-Chr8:21887221 0 wgd
Lsi11g01126 Lsi-Chr11:19691751 Lsi08g01356 Lsi-Chr8:21887221 0 wgd
Lsi04g01711 Lsi-Chr4:24449640 Lsi08g01356 Lsi-Chr8:21887221 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi08g01356 K22390 - csv:101210805 899.812