Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi08g01426 ATGTCGACTACCTCCATTATTATCCCTTCTCTTCAAACCCAGTTGCGATTCCCGTCGCAAGAAACGCCTCTGAGATCTCGTTCTAGAGTTGGGTTCGTTTCCCTACGCCCAATCTGCGCCGCCGACAGGGTTTCCTCCACGTCTTCCTCCTCTGTTCAAGTGCCGCAGCGGACTGTTTCGCCGCCGGAACCTACCAAGCTTCCTTTGAGGAAGATTCCAGGTGACTATGGGCCGCCGATGTTTGGGGCGTTGAAGGACCGACAAGACTATTTCTATAATCAGGGGAGGGAAGAGTATCTGAAATCTCGAATGCTTCGGTATGAATCCACTGTGTATAGAACCAATATGCCACCGGGTCCATTTATCACTTCCGATTCTCGAGTTGTTGTTTTACTCGACGGGAAGAGTTTTCCTGTTCTTTTCGACAATTCTAAAGTTGAGAAGAAGGATCTCTTTACCGGGACTTACATGCCTTTAACAGAGCTCACCGGCGGTTACAGGGTTCTCTCTTATATTGACCCATCTGAGCCCGATCACGAGAAGCTTAAACAGCTCATCTTCTTCCTCCTCAAGCACCGCCGGGATAAAATTTTGCCGGAATTTCACTCTACTTTCTCCGAGCTATTTGAGACTCTGGAGAAGGATTTGGCTGCTGCTGGTAAAGCCGAGTACAATGCTTCCGGTGAACAGGCGGCGTTTAATTTCTTGGCTCGGTCTCTCTTCGGAGCCAATCCGGTCGATACCAAATTGGGTCGTGACGCTCCGAAATTGATTTCGAAATGGGTTTTGTTCCAGCTTGGCCCTGTTCTCAGGCTCGGTCTCCCCAAGGTCGTCGAGGAGCTTCTCCTCCGCACGGTCCGGCTCCCGCCGGCGCTGATCAAAGCCGATTACCGGCGTCTGTATGACTTCTTTTACCAGTCGTCGGAGGCGGTGTTTGAGGAGGCGGATAGATTGGGAATTTCGAGGGAAGAAGCTTGCCACAACTTGCTATTCACAACTTGTTTTAATTCATTCGGTGGGATGAAGATCTTATTCCCCAATATGATCAAATGGATCGGCCGAGCCGGAGTAAATCTCCACACCCAACTCGCACGGGAGATTCGTACTGCCGTAAAAGCCAACGGCGGGAAAATCACGATGGGGGCTATGGAACAGATGCCGCTGATGAAATCAGTGGTATATGAAGCGTTCAGAATCGAGCCGCCGGTTCCGGTTCAGTACGGTCGGGCGAAGAAGGACCTTGTGGTCGAAAGCCACGACGCGGCTTTCGAGATCAAAGAAGGAGAAATGTTGTGTGGGTATCAGCCATTCGCGACCAGAGATCCAAAAATCTTCGACAGAGCCGACGAGTTCGTGCCTGATCGATTCACCGGCGACGGTGAAGAGTTGCTGAAACACGTGCTATGGTCAAACGGACCAGAGACCCAGTCGCCGACGGTTCAGAACAAGCAGTGCGCCGGAAAAGACTTCATCGTCTTCATCTCTCGCCTTCTCGTCGTCGAACTCTTCCTCCGGTACGACTCCTTCGACATCGAAGCCACAAACACTCCGTTAGGCGCCGCCGTCACTGTAACTTCCCTGAAGAAAGCAAGTTTCTGA 1599 51.41 MSTTSIIIPSLQTQLRFPSQETPLRSRSRVGFVSLRPICAADRVSSTSSSSVQVPQRTVSPPEPTKLPLRKIPGDYGPPMFGALKDRQDYFYNQGREEYLKSRMLRYESTVYRTNMPPGPFITSDSRVVVLLDGKSFPVLFDNSKVEKKDLFTGTYMPLTELTGGYRVLSYIDPSEPDHEKLKQLIFFLLKHRRDKILPEFHSTFSELFETLEKDLAAAGKAEYNASGEQAAFNFLARSLFGANPVDTKLGRDAPKLISKWVLFQLGPVLRLGLPKVVEELLLRTVRLPPALIKADYRRLYDFFYQSSEAVFEEADRLGISREEACHNLLFTTCFNSFGGMKILFPNMIKWIGRAGVNLHTQLAREIRTAVKANGGKITMGAMEQMPLMKSVVYEAFRIEPPVPVQYGRAKKDLVVESHDAAFEIKEGEMLCGYQPFATRDPKIFDRADEFVPDRFTGDGEELLKHVLWSNGPETQSPTVQNKQCAGKDFIVFISRLLVVELFLRYDSFDIEATNTPLGAAVTVTSLKKASF 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22492550 22494148 + Lsi08G014260.1 Lsi08g01426 669352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi08g01426 532 Pfam Cytochrome P450 361 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi08g01426 532 Gene3D Cytochrome P450 63 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi08g01426 532 MobiDBLite consensus disorder prediction 46 72 - -
Lsi08g01426 532 PRINTS E-class P450 group IV signature 386 402 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi08g01426 532 PRINTS E-class P450 group IV signature 485 503 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi08g01426 532 PRINTS E-class P450 group IV signature 439 457 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi08g01426 532 PANTHER ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE 48 530 - -
Lsi08g01426 532 PANTHER CYTOCHROME P450 26 48 530 - -
Lsi08g01426 532 SUPERFAMILY Cytochrome P450 67 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi08g01426 532 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi08g01426 Lsi-Chr8:22492550 Lsi11g01051 Lsi-Chr11:18200999 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi08g01426 K01723 - csv:101221732 982.63