Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lsi08g01515 | ATGCTTTATTCCTACAACACCGTGGTTCATGGCTTCTCCACAAGATTGACTGTGGAGGAGGCTAAGTTAATAGAAAAGCAAGAAGGAATTCTTGCTGTCATACCTGAAGTGAAGTACGAGCTCCACACCACTCGAACACCTGAGTTTCTTGGACTTGGGAAGAGTGTTTCTTTCTTCCCGGCATCGGAGAAGGTTGGTGGAGTGGTCATCGGAGTTCTCGACACCGGTGTATGGCCTGAATTGGAGAGCTTCAATGATGCAGGGCTTGGACCAGTACCTGCAAGCTGGAAAGGGGAGTGTGAAGTGGGTAAAAACTTCACATCATCTAGTTGTAACAGGAAATTGATAGGAGCCAGGTACTTTTCCAAGGGCTATGAAGCAGCATTTGGTGCAATTGATGAATCCCAGGAGTCGAAATCGCCGAGGGACGACGATGGCCACGGTTCTCACACGTCAACAACTGCTGCAGGATCCGCCGTGACGGGTGCCAGCCTCTTTGGCTTTGCTGCAGGGACTGCAAGAGGAATGGCGGCTGAAGCTCGGCTTGCGACATATAAGGTATGTTGGCTTGGAGGGTGTTTCGGCTCTGACATTTTAGCTGCAATTGATAAGGCTGTTGAAGATGGTGTCGATGTTCTATCCTTGTCGCTTGGTGGATCATCCCCTGATTACTACAGAGACAATGTTGCCATTGGAGCCTTCTCTGCTGCAGCTCAGGGAGTTTTTGTGTCATGTTCTGCTGGAAATGGTGGCCCATCCTCAGGTAGCTTGTCCAATGTGGCGCCGTGGATAACCACCGTTGGCGCCGGGACGCTGGACAGAGACTTCCCAGCATATGTTACCCTAGGAAACGGGAAGAAGATCACAGGGGAGTCGCTCTACAGTGGAAAGCCTTTGCCGGACTCTTTACTACCAATTGTATATGCAGGCAATGCGAGTAATTCAACCAGTGGTAGCCTTTGCTTGAGCAGTGTTCTGAATCCGGCGAAGGTGGCCGGAAAAATAGTCGTGTGTGACAGAGGAGGGAACTCTCGAGTTCAGAAAGGATTGGTGGTAAAAGAGGCCGGTGGTGTAGGGATGATTCTAGCCAACACTGAAGCATATGGAGAAGAACAATTAGCCGATGCACATCTCTTACCCACGGCGGCTGTTGGCCAAAAATCCGGCGACGCAATAAAGAGCTACATCTCCTCCGATGCAAACCCAACAGCAGCAATCAGCACCGGCACCACAAGATTGGGAGTTCAACCGTCGCCGGTAGTGGCAGCATTTAGTTCTCGAGGCCCTAATCTCCTCACTCCACAAATTCTCAAACCCGATTTGATAGCACCGGGAGTGAACATTCTGGCTGGATGGACCGGCGGCGCTGGACCGACTGGTTTAGACAGCGATAAGCGGCATGTGGCCTTCAACATCATCTCCGGGACATCAATGTCGTGCCCTCACATCAGTGGATTAGCCGCTCTTCTTAAAGCCGCTCATCCAGATTGGAGCCCAGCCGCCATTAGATCTGCCCTAATGACCACAGCATACTCAACATATAAAAATGGCGAAGCGATTCAAGACGTGTCCAACGGATCACCATCGACGCCGTTCGATATCGGAGCCGGACATGTAAATCCAACGGCCGCCCTCGATCCCGGCCTTGTTTACGATACCACCACTGACGATTACTTCGCCTTCCTCTGTGCCCTAAACTACAGCTCACTTCAAATTAAAGTAATCAGCAAGAAAGACTACACATGCAATGGCAACAAGAACTACAAATTGGAGGATCTGAACTACCCGTCATTTGCAGTTCCATTAGAAACCCCTTCCACCAAAGGAGGTGAAGACGTCGCTCCGACCACCGTAAAATATACAAGGACTTTGACCAACAAGGGTGCTCCGTCGACGTATAAGGTCTCAGTGACATCAAAAAGTCCATCTGTGAAGATTGTGGTTGAGCCGGAATCACTGAGTTTTGCAGAGGCAAATGAGCAGAAGAGTTATACAGTGACTTTCATTGCTTCTCCAATGCCGTCAGGGTCTGAGAGCTTCGCTCGGCTGGAATGGTCAGATGGGAAACACAATGTGGGGAGCCCCATAGCTTTCACCTGGACTTAA | 2106 | 50.28 | MLYSYNTVVHGFSTRLTVEEAKLIEKQEGILAVIPEVKYELHTTRTPEFLGLGKSVSFFPASEKVGGVVIGVLDTGVWPELESFNDAGLGPVPASWKGECEVGKNFTSSSCNRKLIGARYFSKGYEAAFGAIDESQESKSPRDDDGHGSHTSTTAAGSAVTGASLFGFAAGTARGMAAEARLATYKVCWLGGCFGSDILAAIDKAVEDGVDVLSLSLGGSSPDYYRDNVAIGAFSAAAQGVFVSCSAGNGGPSSGSLSNVAPWITTVGAGTLDRDFPAYVTLGNGKKITGESLYSGKPLPDSLLPIVYAGNASNSTSGSLCLSSVLNPAKVAGKIVVCDRGGNSRVQKGLVVKEAGGVGMILANTEAYGEEQLADAHLLPTAAVGQKSGDAIKSYISSDANPTAAISTGTTRLGVQPSPVVAAFSSRGPNLLTPQILKPDLIAPGVNILAGWTGGAGPTGLDSDKRHVAFNIISGTSMSCPHISGLAALLKAAHPDWSPAAIRSALMTTAYSTYKNGEAIQDVSNGSPSTPFDIGAGHVNPTAALDPGLVYDTTTDDYFAFLCALNYSSLQIKVISKKDYTCNGNKNYKLEDLNYPSFAVPLETPSTKGGEDVAPTTVKYTRTLTNKGAPSTYKVSVTSKSPSVKIVVEPESLSFAEANEQKSYTVTFIASPMPSGSESFARLEWSDGKHNVGSPIAFTWT | 701 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 23224529 | 23226634 | - | Lsi08G015150.1 | Lsi08g01515 | 669441 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lsi08g01515 | 701 | PRINTS | Subtilisin serine protease family (S8) signature | 143 | 156 | IPR015500 | - | |
| Lsi08g01515 | 701 | PRINTS | Subtilisin serine protease family (S8) signature | 65 | 84 | IPR015500 | - | |
| Lsi08g01515 | 701 | PRINTS | Subtilisin serine protease family (S8) signature | 474 | 490 | IPR015500 | - | |
| Lsi08g01515 | 701 | Pfam | Fibronectin type-III domain | 592 | 697 | IPR041469 | - | |
| Lsi08g01515 | 701 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 1 | 699 | IPR045051 | - | |
| Lsi08g01515 | 701 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT1.7 | 1 | 699 | - | - | |
| Lsi08g01515 | 701 | MobiDBLite | consensus disorder prediction | 133 | 155 | - | - | |
| Lsi08g01515 | 701 | Pfam | PA domain | 305 | 392 | IPR003137 | - | |
| Lsi08g01515 | 701 | Pfam | Peptidase inhibitor I9 | 1 | 42 | IPR010259 | - | |
| Lsi08g01515 | 701 | Gene3D | Peptidase S8/S53 domain | 67 | 558 | IPR036852 | GO:0004252|GO:0006508 | |
| Lsi08g01515 | 701 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 38 | 545 | - | - | |
| Lsi08g01515 | 701 | CDD | PA_subtilisin_like | 279 | 406 | - | - | |
| Lsi08g01515 | 701 | CDD | Peptidases_S8_3 | 39 | 511 | IPR034197 | - | |
| Lsi08g01515 | 701 | Gene3D | - | 273 | 413 | - | - | |
| Lsi08g01515 | 701 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 1 | 42 | IPR037045 | - | |
| Lsi08g01515 | 701 | SUPERFAMILY | PA domain | 326 | 398 | IPR046450 | - | |
| Lsi08g01515 | 701 | Pfam | Subtilase family | 67 | 521 | IPR000209 | GO:0006508|GO:0008236 | |
| Lsi08g01515 | 701 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 475 | 485 | IPR023828 | - | |
| Lsi08g01515 | 701 | SUPERFAMILY | Subtilisin-like | 41 | 549 | IPR036852 | GO:0004252|GO:0006508 | |
| Lsi08g01515 | 701 | Gene3D | - | 562 | 700 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lsi06g00340 | Lsi-Chr6:3784647 | Lsi08g01515 | Lsi-Chr8:23224529 | 0 | dispersed | |
| Lsi08g01515 | Lsi-Chr8:23224529 | Lsi10g00488 | Lsi-Chr10:7018143 | 0 | dispersed | |
| Lsi11g00788 | Lsi-Chr11:9148837 | Lsi08g01515 | Lsi-Chr8:23224529 | 1.81E-107 | dispersed | |
| Lsi01g00922 | Lsi-Chr1:7459533 | Lsi08g01515 | Lsi-Chr8:23224529 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lsi08g01515 | - | - | csv:101207099 | 1247.65 |