Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi08g01583 ATGTTCTTCATTGAGGATTTGTGGCAGATGCTCTGTATTCGAGGCTTTCAGGATACAACTCGACTTCTCTCTGAGTCTTTTGTACGGACCATATCCGAATCCATGGCCAATTCATCTTGTGGAGTCTCGGAATTTGAACTCTGCAGAAACGATTCGGCGGCGCTCCATTTCAAATTAATCGCCATCGCCTCGATTCTAACATCGGGAGTCATCGGAATTGCCATTCCGTTGTTTGGTAAACAGAGTCGGTTCCTCAAAACAGACGGAAACCTGTTTGTGGCGGCGAAGGCGTTTGCCGCCGGGGTGATTCTAGCCACCGCCTTCGTCCATATGCTTCCTGATGGATCGAACGCCCTCTCCGATCCGTGCTTGCCGGAATTTCCATGGTCCAAATTCCCCTTCTCTGGATTTTTCGCGATGATGGCGTCGCTTTTGACGCTCCTCGTCGATTTCGTCGGAACTCAGTACTACGAGCGGAAACAAGGGATGATGCGGTCGAAAGAGGAGGCGAACCGGGTCGGATCGGCGGTGGATTCCGCGTTGGAATCCGGCATTGTTCCGGCCGGAGATTTAAACGTGAAAGTGTTTGGTGAAGAGGACGGCGGCGCGATGCACATCGTCGGAATGCATGCCCACGCCGCCCACCACCGGCACAGTCATCCGCAGGGAAAGGAGGCATGTGATGGGCACGTGACAGTTCATGATCATGGGCATGCCCATGGACATGGTCATTCTCATGGGCTGGACGGCGACGATGACGAAAGCGGTGTGCGACATGTCGTTGTTTCCCAGATTTTGGAGCTTGGAATAGTGTCACATTCAGTGATAATTGGGCTGTCTCTTGGAGTGTCCCACAGCCCATGCACCATTAGACCCTTAATTGCAGCCCTCTCCTTCCATCAGTTCTTTGAAGGCTTTGCTCTTGGTGGCTGCATTTCTCAGGCTCAATTCAACACCCTCTCCACCTCCCTCATGGCTGTCTTCTTCGCCATCACCACGCCCCTTGGGATCTCCATTGGTGCTGCCGTCGCCTCTACCTACAACCCCAACAGCACCGGGGCGTTGGTTGCCGAAGGTATTTTGGACTCTCTATCGGCCGGAATTCTGGTGTACATGGCTCTAGTTGATTTGATTGCGGCCGACTTTCTTAGCAAGAGAATGAGCTGCAATTTTAGACTCCAAATTGTTTCGTATTGTACTCTCTTCCTCGGCGCGGGATTGATGTCTTCGCTTGCGCTTTGGGCTTGA 1248 52.56 MFFIEDLWQMLCIRGFQDTTRLLSESFVRTISESMANSSCGVSEFELCRNDSAALHFKLIAIASILTSGVIGIAIPLFGKQSRFLKTDGNLFVAAKAFAAGVILATAFVHMLPDGSNALSDPCLPEFPWSKFPFSGFFAMMASLLTLLVDFVGTQYYERKQGMMRSKEEANRVGSAVDSALESGIVPAGDLNVKVFGEEDGGAMHIVGMHAHAAHHRHSHPQGKEACDGHVTVHDHGHAHGHGHSHGLDGDDDESGVRHVVVSQILELGIVSHSVIIGLSLGVSHSPCTIRPLIAALSFHQFFEGFALGGCISQAQFNTLSTSLMAVFFAITTPLGISIGAAVASTYNPNSTGALVAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIVSYCTLFLGAGLMSSLALWA 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 23857805 23864169 - Lsi08G015830.1 Lsi08g01583 669509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi08g01583 415 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 35 415 - -
Lsi08g01583 415 PANTHER ZINC/IRON TRANSPORTER 35 415 - -
Lsi08g01583 415 MobiDBLite consensus disorder prediction 233 253 - -
Lsi08g01583 415 Pfam ZIP Zinc transporter 56 412 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lsi08g01583 415 TIGRFAM zip: ZIP zinc/iron transport family 40 415 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi08g01583 Lsi-Chr8:23857805 Lsi11g01590 Lsi-Chr11:24288182 2.41E-91 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi08g01583 K14709 - csv:101218224 730.709