Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi09g00055 | TTATTTCTTTTCCCTTCTAAGCATGGCCCTTACAAGCTCCCACCAGGTCCATCCACATTCCCTATTCTCACTAACTTCCTATGGCTCCGCCAATCTCCTCTTGAGCTTGAATCTTTGTTGCGTAGTTTCATTGCAAAATATGGGCCAATCCTCACCGTCCACGTCGGCCCGTCCCCCGCCATCATCATCGCCGATCGCTTCATCGCCCACAAGGCCCTCGTCCAAAATGGCGCCATTTTCGCCGACCGCCCCCAAGCCCTCTCCGTTAATAGGATCACGGCTTCTTCCAACCTCGACAACATCACCTCTGCTCCATACGGCCCCACTTGGCGCCTTCTCCGGCGCAACCTCGCGGCGGAGATGCTCCACCCTTCGCGGGTCAGGGCTTATTCTCGGGCACGCAAATGGGTTCTAGACGTCCTCGTTGCTCGCCTTTTGGCTCGGTCGGGATCCAAGGGCGGGGAATCAGTTGTTGTTGAGCATTTTCAGTTTGCTATGTTTTGTTTGTTGGTTTTGATGTGCTTTGGAGACAAGTTGAATGAGACACAAATCTTGGAGATTCAACAAGTGCAGCGTGAGATTCTTGTAAATCTTCAACGCTTTGTTATACTTAATTTGTGGCCTAAGTTGATGAAGATTTTGCTAAGAAAGCGCTGGAAGGAATATTTACAACTCAAGAGCAAACAACAAAAGGTCCTAATTCCATTTATCAAGGCACGAGAGAAGGTCAAAGAAGAAAGAGCAAAAAAAGAAGGAGAAGAAAAGGAAGAATTTGTGGTATCATATGTTGATACGTTGCTCGATTTGCAGCTCATCGACGAGAAAAGAAAGCTTAGGAACGAAGAAATGGTGAACTTATGTTCGGAGTTTCTCAATGCCGGGACTGACACTACCGCCACGACATTGCAATGGATCATGGCAAACTTAGTGAAGTACCCACAAATTCAACAAAAACTATTCGAAGAGATCAAAGGAGTTAAGAAATCACGGGAGGAGGAGGTGAAGGAAGAAGATTTAAGGAAGCTTCCATATTTGAAAGCTGTGATTCTAGAAGGATTAAGAAGACACCCACCAGGGCATTTCATGTTACCACATGCAGTGAAAGAAGATACAACGTTAGAGAATTACTTCATACCCAAGAACGGAATTGTGAATATCTATGCTGTGGAGATGGGGTGGGATCCACAAGTATGGGACGATCCGATGGCGTTTAAGCCGGAGCGGTTCATGAGCGACAACGGAGGGGAGGTGGTGTCGACGACGTTCGATATAACGGGGAGCAAGGAGATTAAGATGATGCCATTTGGAGCAGGGAGAAGGATTTGTCCAGGGGCAGCTTTGGCAATGCTTCATTTGGAATATTTTGTGGCAAATTTGGTTTGGAAATTTGAATGGAAGGCTGTGGAAGGAGAAGAAATTGATTTATCAGAGAAGATGGAATTTACTATTGTGATGAAGAATCCTCTCAAAGCCCATATTCATCCAAGGTTTTAG | 1494 | 46.05 | LFLFPSKHGPYKLPPGPSTFPILTNFLWLRQSPLELESLLRSFIAKYGPILTVHVGPSPAIIIADRFIAHKALVQNGAIFADRPQALSVNRITASSNLDNITSAPYGPTWRLLRRNLAAEMLHPSRVRAYSRARKWVLDVLVARLLARSGSKGGESVVVEHFQFAMFCLLVLMCFGDKLNETQILEIQQVQREILVNLQRFVILNLWPKLMKILLRKRWKEYLQLKSKQQKVLIPFIKAREKVKEERAKKEGEEKEEFVVSYVDTLLDLQLIDEKRKLRNEEMVNLCSEFLNAGTDTTATTLQWIMANLVKYPQIQQKLFEEIKGVKKSREEEVKEEDLRKLPYLKAVILEGLRRHPPGHFMLPHAVKEDTTLENYFIPKNGIVNIYAVEMGWDPQVWDDPMAFKPERFMSDNGGEVVSTTFDITGSKEIKMMPFGAGRRICPGAALAMLHLEYFVANLVWKFEWKAVEGEEIDLSEKMEFTIVMKNPLKAHIHPRF | 497 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 458086 | 459907 | + | Lsi09G000550.1 | Lsi09g00055 | 669668 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi09g00055 | 497 | Coils | Coil | 236 | 256 | - | - | |
Lsi09g00055 | 497 | Pfam | Cytochrome P450 | 14 | 488 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00055 | 497 | PANTHER | CYTOCHROME P450 | 7 | 494 | - | - | |
Lsi09g00055 | 497 | PRINTS | E-class P450 group I signature | 44 | 63 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00055 | 497 | PRINTS | E-class P450 group I signature | 68 | 89 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00055 | 497 | PRINTS | E-class P450 group I signature | 346 | 364 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00055 | 497 | PRINTS | E-class P450 group I signature | 442 | 465 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00055 | 497 | PRINTS | E-class P450 group I signature | 282 | 299 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00055 | 497 | PRINTS | E-class P450 group I signature | 302 | 328 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00055 | 497 | PRINTS | E-class P450 group I signature | 432 | 442 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00055 | 497 | PRINTS | E-class P450 group I signature | 387 | 411 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00055 | 497 | PRINTS | P450 superfamily signature | 347 | 358 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00055 | 497 | PRINTS | P450 superfamily signature | 433 | 442 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00055 | 497 | PRINTS | P450 superfamily signature | 293 | 310 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00055 | 497 | PRINTS | P450 superfamily signature | 442 | 453 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00055 | 497 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 7 | 494 | - | - | |
Lsi09g00055 | 497 | SUPERFAMILY | Cytochrome P450 | 14 | 496 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00055 | 497 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 435 | 444 | IPR017972 | GO:0005506|GO:0016705 | |
Lsi09g00055 | 497 | Gene3D | Cytochrome P450 | 7 | 497 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi09g00055 | Lsi-Chr9:458086 | Lsi10g00252 | Lsi-Chr10:4108716 | 3.59E-113 | dispersed | |
Lsi09g00055 | Lsi-Chr9:458086 | Lsi08g00659 | Lsi-Chr8:14933121 | 2.34E-115 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi09g00055 | K24184 | - | csv:101218555 | 810.061 |