Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi09g00227 ATGGCGACGGTGATTTCGGCCGTTGCAACGGCCGCGCCGTACCAATTTGATTACCGGAGATTGTTTCAACGGCCGGCCGGAGCTCCGTCTCTACGGCTGGGTTCTCGGAAGCGTTTTCCATGGCGGTGTTTTGCGAAACAGAGCTCGAGAAGATTGCTGGCTATGGAGAAGAAGAAAAGTGAAGAAGATGAAATGGTTAAGGAATTGAAGATGACTGTGGGGGAGAAAATGGCGAGGAAGAAAGCGGAAAGGGATGCTTATTTGATAGCTGCAATAGTTTCGAGCTTTGGGATCACTTCAATGGCCGCCATCGCTGTTTATTACAGATTCTCTTGGCAAATGGGGGTGGGAATGGAATTTTGGGCAAGATGGGCTCACAAAGAGCTATGGCATGCTTCGTTGTGGGATATGCATGAGTCTCATCACCGGCCGAGGGTTGGAGCTTTTGAATTCAACGATGTGTTTGCAATTATCAACGCTGTTCCAGCCATTGCTCTTCTTTCTTTTGGCTTCTTCAATCAAGGCTTCTTTCCCGGCCTCTGTTTTGGTGCCAATCCTTCCAACCCATTGAAGTCCAAGTCATTGTATGACGTTGCGTTCTATGATTGGCCATTGACCGTTATTACTAATTTTCAACAGGGTTTGGGAATTACGGTGTTTGGGATGGCCTACATGTTCGTCCACGATGGCCTCGTGCACTGTCGTTTCCCAGTGGGTCCCATAGCCGCTGTCCCTTACTTACGACGTGTCGCTGCTGCCCATCATGTATTTATCGACGTGTCGTCGGTTTTTGCCTAA 798 48.87 MATVISAVATAAPYQFDYRRLFQRPAGAPSLRLGSRKRFPWRCFAKQSSRRLLAMEKKKSEEDEMVKELKMTVGEKMARKKAERDAYLIAAIVSSFGITSMAAIAVYYRFSWQMGVGMEFWARWAHKELWHASLWDMHESHHRPRVGAFEFNDVFAIINAVPAIALLSFGFFNQGFFPGLCFGANPSNPLKSKSLYDVAFYDWPLTVITNFQQGLGITVFGMAYMFVHDGLVHCRFPVGPIAAVPYLRRVAAAHHVFIDVSSVFA 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2375121 2378233 + Lsi09G002270.1 Lsi09g00227 669840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi09g00227 265 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 116 256 IPR045019 GO:0016491
Lsi09g00227 265 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 42 114 IPR045019 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi05g01196 Lsi-Chr5:19829087 Lsi09g00227 Lsi-Chr9:2375121 2.80E-55 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi09g00227 K15746 - csv:101214325 355.91