Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi09g00264 ATGGGGAAAGGTAAACCAAGAGCTGTGGAAAAGGGGGTAATAGGGCAGAATTTGAGTGTATGTTCATCAACGTCATTGAATATACCATCTGGGCCTGTGTATCATCCAACTGAAGATGAATTTAGAGACCCATTGGAGTATATATATAAGATCAGACCCGAGGCTGAGCCGTATGGGATTTGTAGGATAGTGCCTCCCAAGAACTGGAAACCTCCATTTGCATTGAGATTAGATTCTTTTACATTTCCCACAAAAACTCAGGCCATTCATCAATTGCAGGTTAGACCTGCTGCCTGTGATTCAGAGACTTTTGAGCTTGAATATAATAGGTTTTTGGACGATCATTTTGGCAAAAAGATGAAGAAGAAGGTGGTTTTTGAGGGAGGGGAGTTGGATTTGTGCAAGTTATTTAATGCAGTGAAGCGTTATGGTGGGTATGATAAAGTTGTTAAGGAGAAGAGGTGGGGTGAGGTTTTTAGGTTTGTTAGATCAACAAGGAAGATTTCGGAATGTGCTAAGCATGTACTGTGTCAATTGTACCGAGAACATCTATATGATTATGAGAACTATTATAATAAATTGAATAAGGATGTCATGAAGAGTTCAAAAAGGAAAATGCAAGATGAGAAGCTTAGTGAATGCCTGGCCGAGTTTTCAACCTCTAAAAGGAGGCGGCAGTACACTGACGATGGCAGAGTCAGTGTCTCAAAGTTAAAAGAAGAAGAGAATTATGATCAGATTTGTGAGCAATGTAAAAGTGGATTGCATGGTGAAGTGATGCTTCTATGCGATAGGTGTGACAAGGGGTGGCATATATATTGTCTCTCACCTCCCTTAAAGCAAGTCCCACCTGGGAACTGGTATTGTTTAGATTGCTTGAATTCAGAGAAAGACAGTTTTGGATTTGTGCCTGGTAAATGCTTCTCCCTGGAAGCATTTAAGCGTATGGATTATAGGGCCAAGAAGAAATGGTTTGGCTCAGGGTCTGCTTCTAGAATGCAAATTGAGAAGAAGTTTTGGGAAATTGTGGAAGGTTCATTTGGTGAGGTTGAAGTTAAATATGGCAGTGACTTGGACACATCGGTTTATGGCAGTGGCTTTCCTCGTGAAAATATTCAGAGACCAGAATCAATTGATGCTAAGGTGTGGGATGAATATTGCAATAGTCCGTGGAATCTCAATAACTTGCCCAAATTGAAAGGATCCATGCTTAGAGCCATTCGTCACAATATTACTGGTGTTATGGTGCCGTGGTTGTATATAGGAATGCTATTTTCATCGTTCTGCTGGCATTTTGAAGATCACTGTTTCTATTCAATGAATTACCTACACTGGGGTGACCCAAAATGCTGGTATAGTGTACCTGGTAGTGAAGCTCCTGCTTTTGAGAAGGTTATGCGGAACAGCCTTCCTGATCTTTTTGATGCACAACCTGATTTGCTTTTTCAACTTGTCACCATGTTGAATCCATCCATCTTACAAGAAAATGGCGTACCCGTTTATACTGTACAACAGGAGCCTGGGAATTTTGTTGTGACCTTCCCTAGATCTTTCCATGGGGGTTTTAATCTTGGATTAAATTGTGCTGAGGCCGTAAATTTTGCTCCTGCCGACTGGATGCCTTATGGTGGGTTTGGAGAAGAATTGTATCAGCTTTATCACAAACCTGCTGTTTTTTCTCACGAGGAGCTTATCTGTGTGATAGCAAAGATGGACTGCAGTGACCGAGTTTCTCCTTACCTGAAGAAAGAGTTACTTCGGATTTATTCGAAGGAGAAAAGTTGGAGAGAACAACTTTGGAAAAATGGTGTAATCAGATCTTCTCCGTTGCCTCCTCGAAAGTGTCCTGAATATATTAGTACTGAGGAGGATCCAACATGCGTTATATGTAAGAAGTACCTTTATCTTTCAGCTATAGGTTGCCGTTGTAGGAGATCTGCTTTTGTATGTTTGGAGCACTGGCAACACCTTTGTGAATGCAAGTACAGCAGGCGGCGCCTTTTGTATCGTTATACACTTGCTGAACTATATGATTTGATTGGTATAATTGATAGATGTGGTTCTGGGGATACAACTGAAAGTAAGGATTTGCGACAAGCGGGCTTATGTTACACTGAACGATGTACTTTGACAAAAAAGGTGAAAGGTGGTCGTGTCACTCTGTCTCGACTTGCAGAAAAATGGTTACTGCATTCAAGTAAGGTTCTTCAAGATCCATTCTCAAATGAGGCATGTGTTAAGGCTTTGAGAGAAGCCGAGCAATTCCTTTGGGCTGGTCATGACATGGATCACGTCCGTGATGTTGTAAGAAACTTGGATGAAGCTCAAAAGTGGGTTCAAGGCATTGGAGACTCCCTTTCTAAAATTGAAGCGTGGTCATGTGATCATTCTGGAAGTTTAGAGAAAATTTGCTTGGATCATGTAAACAATTTGTTGAGTCTACCCCCGATATCATGTAACCATCCTGGGTATCTTAAATTGAAGGATTATATTGAAGAAGCAAAGATTTTAATACAAGATATTGATAATGCCTTATCAACATGCCCTGATTCTTGCATAGAAAGTGTCAGAGAAATTTTGGAGAAACAGCCTGCTGCTTTTGAGCTCGAGATTCTTTACAAGTTGAAGTCTAAGATCTTGGAACTCGGAATCCAGCTTCCAGAGACAGAAATGGTGCTGGATTTAACAAGGCAAGCTGAACTACATCGTTCTAGATGTGCAGAAATTATGAACGGTCCCATGAACTTGAAGACTGTCGAACTATTCCTTCAAGAATCCAATGGTTTTGCTGTTAATATACCTGAACTGAAGCTTATAAGGCAGTATCATGATGATGTTGTTACATGGAATGCTCGTCTTAAAGCTGTTATGGTTAATGTTCATGAACGGGAGGATCAACATAATTTTATCTTTTGTTTCATGAACTTTCGGGGGCGGGCTGAGACAGTTGATGATGTACCTATAGTTGAGGTTGAGTTGAAGAAGGCTTCTGTCAGGGAAAAAGCTCAAAAGTTACGCGATACCAAGGTTACTATAGTATTCATGCAGAAGCTGATGGAGGAGGCTGTAGAATTAGAAATTGATAAGGAAAAATTGTTTGCTGATATCCGTGGAGTTCTCGATTCAGCAATGAGTTGGGAGAAGAGAGCTATGGATTGTCTAGCGCATGGGGCCCAGACTTCTGAAGATTTCGGTGTTATTCTACCTTCTCTTGATGATGTCACGAATGAAGTATCCTCGGCCAAGGCTTGGCTAAATATTTCAAAACCTTTCTTAGAGTTTGTTCTCCCTACGTCATCTGCACCAAGATCGCAGCTGAAAATTGAAACACTAAAGGAGTTGGTTTCTCAGTCAAAACTCCATAAGGTCACTTTGGAAGAAAGCAGAGTGCTTGCTGAGGTTCTGAGAAAATGCGAGAATTGGAAAGATGGAGCAAACTCTTTATTGCAAGATATCGATGATCTTTTGAATGCGGATGATATAGGGGATGGGCTGAGCAATTGTCTTATTCCTAAGATCGAAAAATTAGTTGATAGAATCAATACTATTATTACAGCCGGTCTATCTCTTGGTTATGACTTCCGTGAGATTTCTAGACTCCAAAGTGCTTGTTCTACACTCATGTGGTGCAATAAAGTTCTTTCTCTTTGCCATGGTATTCCTTCTTATCAGGATGTTGAGAGCTTGATGAGGGTTGAAGAGGATAATTCTTGTTTATATACCTCTGGTGTTATGTGGAGCTTGTTGGTGGAAGGTGTCAAATGGCTGAAACAAGCCTTAGAGAGTATCAGAATCAACTTCTCAGCCATGAATGGTCAACTTGTAAATGCTATTCAGAAGCACAAGTTATGGCAGGAAGAAGTACGCCAATTTTTCATTATGAAGCGTGCTCAACGATCGTGGACTCTGTTATTAAAGCTTAAGGAAGAAGGAGACATCGTTGCCTTCAATTGTTCAGAGCTACATTTAATTTTTTCTGAAGTTGAAAAGATTGAAAAGTGGAAGAAACAAATGGGGGAAATCATGAAAACAACTTTTGGGGATGGAAGTTCTCTGCTTGATTGTCTACGAGAGATAAAGACATCACTGGATAGATCCCTATTCATATATGAGAAATCGTTGCTCTACACTGATCAGAACTTATGTGTGTGTTGCTCTAGCGATTCACAGGATCAACATCATTTTACTTGCTCAGGATGTTCAACACTTGTGGATTCCTTCTTGTCAACATTGCACTTGGCAAGGGGTTTTCTTTTTGACCCCTGGCTTTTTGCTTGGTTGCTTTTGTTAACGAGCATGACTCCTTCAACTAGGTGTGAAGTGCTTACTACTGATACCGATAAACTTGTTGGAGTCGTGCTCTACCATTTGCAGTGCCTGGGGCAAGCAAGAGAAAAAACAAGCAATACAGATATCTTTATATGCCCTTATTGCTATAGCTCAAGGGGTGTATTATCAATTGATAAAAGTGGAGGTCCCTTGAGATTTTTGGCAAATCGTCCTGAACTAGAAATGCTCACTAAGCTCAAATCTGATGCCGTGAACTTCTGTGTTTGGGTAATAGGTGGCCACTTGGGGTGGGTAAGGTCTATTGCATTTGATCCCAGTAACATGCGGTTTTGTACTGGTTCAACAGATCGCACAATCAAGATTTGGGATATTGCAAGTGGAAAGTTAAAACTCACATTGACAGGCCATATGAGCAAATATGAGAACAAGGTAATCTATTCGTTCCATGGTCATGTGAGTGGTGTTTACTGTTTGGCCCTTCATCCAACAATTGATATTTTGCCAAGTGGGGTACGTGATTCCGTATGCCGGGTGTGGGACATTCGACAACCAATATTTTGCTACCATTACCAAGTGGGGTACGTGATTCCGTTGGATAGTGAAGCTGGTACAACCTGGCTCGAAGTTGGATATCTTCCTAAATTGATGCCCAGACAAAACTTGATTGAGAGAATAGAAGTTAAATTGTATTGTACTGCTCAAAAAGTTTTGTTCGATCTCTCTGAGATGGAAGAGGAAGATGTATTAAAGCAACTGATTGAGCAGGCTAAAGTATGCAAATCTCACTTGTCAGAAGTCTTGAACTTTGCATCACGTTGTCATGATAAAGATTTTAGTATTGCCTGCAAGAGGTTAACTGTAGCGTTAAAGGCTATGGACGTTGCAGGCATTAGCGATCAAGAAGGTAACTGTGGTCTTGAGATGGAACTATTGAGGAACTCGTGGCGATTCAGAGTCAAGGAAGCTCTTGAAGGTTCTGAAAAACCAACAATGCAACAAGTCCTGGAGCTTCTCGAAGAGGGATCCGCAATAAGCATTCTGCCTGAAGATTGCTACAGACAGAAACTTTTGGAAGTGAAGACTGTTTGCTCAAAGTGGAGAAGTCTTGCAAGGAAGATTTCTGCCGACTGTGGGGCTCTTGAATTGGAGAAAGTTTTTGAATTGATTGTGGAGGGTGAAAATTTACCTGCATACCTCGAGAGGGAGCTCAAGTTATTAAGAAATCGAAGTATGCTTTATTGCATTTGCCGCAAGCCTAATGATCGCAGACCAATGCTTGCTTGTGATATTTGTGAAGAGTGGTATCACTTTGATTGTGTCAAGATAGAATCTACTCCCAAGGTATACATTTGCCCTGCTTGCAAACCGCAAGTAGACAATAAAATGTTGATTCAGCTATCAACGGAATATGAAAGTTCAACTAGCACAAAATTTGTGGAGCCAAAGACCCCTTCTCCTCAACACACGAAACGGAGATCAAAACCAAAGAAAACAAAGCGAAATTTAGTTCGAAGTGTGACGGATTGTTATAGAGAATTCAGGACCAATTCTGACCAAATTCAAATCAAAATTGCGATTTCTTCGAGCCATGAATCGCATCGTGGTCTCGGATTCGGGCTTCCTTCCTTGTGTTTCAATCTTCAAATTTTGCAGCACCGATTGCGCGTTTTGGTCCTCAACGGCGCGGAGCTGAAATTGAGAAATGCTCTTGAACGTGGCCGTTTGCTCGGTTTAGATGTTGGTGATAAGTATGTTGGTTTGGCCGTCTCTGACCCAGATAATAAAATCGCTTCCCCTCTTAGTGTTTTGATCAGGAAGAAGACTAAAATGCATTTGATGGCTGAGGATTTTCAGAGAATTATCTCTGAATTGTCCCTGGCGGGGTTCATTGTTGGGTACCCTTCCCATAGACAAGGGCGCAACCCGGATGCTGTGCAAGTGAAGATTTTCATTGATGACCTTTGCAAAACTGGAAAACTTGAAGGCGTAAAATATACTTTTTGGGATGAGTGCTTTACATCAAAAGTTAGTGCATCTAGTTTGGCCCTTCCTGTTAGTCTTGTGACTTATGTGACATGCCTTTCAATGTCTCCGTCGAATTCACTGACTTGGTCAAACGATTGTGATTGTGTTTGA 6426 41.05 MGKGKPRAVEKGVIGQNLSVCSSTSLNIPSGPVYHPTEDEFRDPLEYIYKIRPEAEPYGICRIVPPKNWKPPFALRLDSFTFPTKTQAIHQLQVRPAACDSETFELEYNRFLDDHFGKKMKKKVVFEGGELDLCKLFNAVKRYGGYDKVVKEKRWGEVFRFVRSTRKISECAKHVLCQLYREHLYDYENYYNKLNKDVMKSSKRKMQDEKLSECLAEFSTSKRRRQYTDDGRVSVSKLKEEENYDQICEQCKSGLHGEVMLLCDRCDKGWHIYCLSPPLKQVPPGNWYCLDCLNSEKDSFGFVPGKCFSLEAFKRMDYRAKKKWFGSGSASRMQIEKKFWEIVEGSFGEVEVKYGSDLDTSVYGSGFPRENIQRPESIDAKVWDEYCNSPWNLNNLPKLKGSMLRAIRHNITGVMVPWLYIGMLFSSFCWHFEDHCFYSMNYLHWGDPKCWYSVPGSEAPAFEKVMRNSLPDLFDAQPDLLFQLVTMLNPSILQENGVPVYTVQQEPGNFVVTFPRSFHGGFNLGLNCAEAVNFAPADWMPYGGFGEELYQLYHKPAVFSHEELICVIAKMDCSDRVSPYLKKELLRIYSKEKSWREQLWKNGVIRSSPLPPRKCPEYISTEEDPTCVICKKYLYLSAIGCRCRRSAFVCLEHWQHLCECKYSRRRLLYRYTLAELYDLIGIIDRCGSGDTTESKDLRQAGLCYTERCTLTKKVKGGRVTLSRLAEKWLLHSSKVLQDPFSNEACVKALREAEQFLWAGHDMDHVRDVVRNLDEAQKWVQGIGDSLSKIEAWSCDHSGSLEKICLDHVNNLLSLPPISCNHPGYLKLKDYIEEAKILIQDIDNALSTCPDSCIESVREILEKQPAAFELEILYKLKSKILELGIQLPETEMVLDLTRQAELHRSRCAEIMNGPMNLKTVELFLQESNGFAVNIPELKLIRQYHDDVVTWNARLKAVMVNVHEREDQHNFIFCFMNFRGRAETVDDVPIVEVELKKASVREKAQKLRDTKVTIVFMQKLMEEAVELEIDKEKLFADIRGVLDSAMSWEKRAMDCLAHGAQTSEDFGVILPSLDDVTNEVSSAKAWLNISKPFLEFVLPTSSAPRSQLKIETLKELVSQSKLHKVTLEESRVLAEVLRKCENWKDGANSLLQDIDDLLNADDIGDGLSNCLIPKIEKLVDRINTIITAGLSLGYDFREISRLQSACSTLMWCNKVLSLCHGIPSYQDVESLMRVEEDNSCLYTSGVMWSLLVEGVKWLKQALESIRINFSAMNGQLVNAIQKHKLWQEEVRQFFIMKRAQRSWTLLLKLKEEGDIVAFNCSELHLIFSEVEKIEKWKKQMGEIMKTTFGDGSSLLDCLREIKTSLDRSLFIYEKSLLYTDQNLCVCCSSDSQDQHHFTCSGCSTLVDSFLSTLHLARGFLFDPWLFAWLLLLTSMTPSTRCEVLTTDTDKLVGVVLYHLQCLGQAREKTSNTDIFICPYCYSSRGVLSIDKSGGPLRFLANRPELEMLTKLKSDAVNFCVWVIGGHLGWVRSIAFDPSNMRFCTGSTDRTIKIWDIASGKLKLTLTGHMSKYENKVIYSFHGHVSGVYCLALHPTIDILPSGVRDSVCRVWDIRQPIFCYHYQVGYVIPLDSEAGTTWLEVGYLPKLMPRQNLIERIEVKLYCTAQKVLFDLSEMEEEDVLKQLIEQAKVCKSHLSEVLNFASRCHDKDFSIACKRLTVALKAMDVAGISDQEGNCGLEMELLRNSWRFRVKEALEGSEKPTMQQVLELLEEGSAISILPEDCYRQKLLEVKTVCSKWRSLARKISADCGALELEKVFELIVEGENLPAYLERELKLLRNRSMLYCICRKPNDRRPMLACDICEEWYHFDCVKIESTPKVYICPACKPQVDNKMLIQLSTEYESSTSTKFVEPKTPSPQHTKRRSKPKKTKRNLVRSVTDCYREFRTNSDQIQIKIAISSSHESHRGLGFGLPSLCFNLQILQHRLRVLVLNGAELKLRNALERGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLIRKKTKMHLMAEDFQRIISELSLAGFIVGYPSHRQGRNPDAVQVKIFIDDLCKTGKLEGVKYTFWDECFTSKVSASSLALPVSLVTYVTCLSMSPSNSLTWSNDCDCV 2141
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2758258 2786344 + Lsi09G002640.1 Lsi09g00264 669877

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi09g00264 2141 Gene3D - 2003 2114 IPR037027 GO:0006139
Lsi09g00264 2141 Pfam C5HC2 zinc finger 627 678 IPR004198 -
Lsi09g00264 2141 SMART ARID_2 95 188 - -
Lsi09g00264 2141 PANTHER LYSINE-SPECIFIC DEMETHYLASE 23 1122 - -
Lsi09g00264 2141 MobiDBLite consensus disorder prediction 1905 1930 - -
Lsi09g00264 2141 Gene3D Cupin 32 536 - -
Lsi09g00264 2141 SUPERFAMILY WD40 repeat-like 1515 1619 IPR036322 GO:0005515
Lsi09g00264 2141 SMART PHD_3 247 293 IPR001965 -
Lsi09g00264 2141 SMART PHD_3 1843 1885 IPR001965 -
Lsi09g00264 2141 PANTHER LYSINE-SPECIFIC DEMETHYLASE LID 23 1122 - -
Lsi09g00264 2141 Pfam PHD-finger 1843 1886 IPR019787 -
Lsi09g00264 2141 Pfam PHD-finger 247 294 IPR019787 -
Lsi09g00264 2141 Gene3D - 84 191 IPR036431 GO:0003677
Lsi09g00264 2141 ProSiteProfiles Trp-Asp (WD) repeats profile. 1521 1562 IPR001680 GO:0005515
Lsi09g00264 2141 ProSiteProfiles Trp-Asp (WD) repeats profile. 1578 1612 IPR001680 GO:0005515
Lsi09g00264 2141 SMART bright_3 99 193 IPR001606 GO:0003677
Lsi09g00264 2141 SMART rnase_8s 2003 2107 IPR006641 GO:0006139
Lsi09g00264 2141 ProSiteProfiles JmjN domain profile. 31 72 IPR003349 -
Lsi09g00264 2141 SMART JmjN_1 30 71 IPR003349 -
Lsi09g00264 2141 ProSiteProfiles Zinc finger PHD-type profile. 245 295 IPR019787 -
Lsi09g00264 2141 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1578 1612 - -
Lsi09g00264 2141 Pfam PLU-1-like protein 818 1149 IPR013637 -
Lsi09g00264 2141 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 242 294 IPR013083 -
Lsi09g00264 2141 ProSitePatterns Zinc finger PHD-type signature. 248 292 IPR019786 -
Lsi09g00264 2141 ProSiteProfiles ARID domain profile. 98 192 IPR001606 GO:0003677
Lsi09g00264 2141 SUPERFAMILY FYVE/PHD zinc finger 1838 1890 IPR011011 -
Lsi09g00264 2141 Gene3D Cupin 1838 1984 - -
Lsi09g00264 2141 Pfam WD domain, G-beta repeat 1517 1553 IPR001680 GO:0005515
Lsi09g00264 2141 Pfam WD domain, G-beta repeat 1574 1610 IPR001680 GO:0005515
Lsi09g00264 2141 Gene3D - 1503 1623 IPR015943 GO:0005515
Lsi09g00264 2141 Coils Coil 1015 1035 - -
Lsi09g00264 2141 Pfam ARID/BRIGHT DNA binding domain 107 188 IPR001606 GO:0003677
Lsi09g00264 2141 SUPERFAMILY FYVE/PHD zinc finger 236 296 IPR011011 -
Lsi09g00264 2141 Pfam Holliday junction resolvase 2004 2111 IPR005227 GO:0006364
Lsi09g00264 2141 SUPERFAMILY Ribonuclease H-like 2003 2109 IPR012337 -
Lsi09g00264 2141 ProSitePatterns Zinc finger PHD-type signature. 1844 1884 IPR019786 -
Lsi09g00264 2141 Coils Coil 988 1008 - -
Lsi09g00264 2141 Pfam JmjC domain, hydroxylase 418 534 IPR003347 -
Lsi09g00264 2141 Pfam jmjN domain 32 65 IPR003349 -
Lsi09g00264 2141 CDD PHD_RSF1 248 292 - -
Lsi09g00264 2141 ProSiteProfiles JmjC domain profile. 385 551 IPR003347 -
Lsi09g00264 2141 SMART WD40_4 1571 1610 IPR001680 GO:0005515
Lsi09g00264 2141 SMART WD40_4 1514 1553 IPR001680 GO:0005515
Lsi09g00264 2141 SMART cupin_9 385 551 IPR003347 -
Lsi09g00264 2141 SUPERFAMILY ARID-like 81 202 IPR036431 GO:0003677
Lsi09g00264 2141 CDD ARID 100 188 - -
Lsi09g00264 2141 SUPERFAMILY Clavaminate synthase-like 341 568 - -
Lsi09g00264 2141 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1521 1558 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi09g00264 K11446 KDM5, JARID1; [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67] - csv:101216734 2688.68
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g02465 Lsi-Chr2:31150049 Lsi09g00264 Lsi-Chr9:2758258 9.13E-08 dispersed
Lsi06g00074 Lsi-Chr6:677752 Lsi09g00264 Lsi-Chr9:2758258 1.02E-07 dispersed
Lsi07g01171 Lsi-Chr7:17195329 Lsi09g00264 Lsi-Chr9:2758258 5.05E-56 dispersed
Lsi09g00264 Lsi-Chr9:2758258 Lsi11g00873 Lsi-Chr11:11328030 2.38E-11 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g328 . . . . . . . . . . Cma02g01458 . Car02g01224 . . . Cpe05g00329 . . . . . . . . . . . . . . Cone8ag0310 . . . . Csa05g00287 Chy09g01219 . . . . . . . . . . Cmo02g01493 . . . . . . . Bhi12g00248 . . . . . . Cla01g00269 Cam01g0278 Cec01g0270 Cco01g0285 Clacu01g0277 Cmu01g0265 Cre09g2244 Lsi09g00264 . . Cme09g01756
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010126 0 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 1 1 32
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
25865 PF08429 PLU-1 1.80E-16 No_clan Lsi TR
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi09g00264 Lsi_Chr09 FPKM 57.430943 74.704781 75.928764 71.962265 53.989246 56.178246 44.697716 83.309586 84.187592 85.082939