Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi09g00385 | ATGGAACCCACTTCCAATTTCATTCATTCTCTCAATTTCTTTGATCCCAATAATCAAACCCGCTTTCTTCTCACCCTTTTCACCGGTTTTCTACTTCTTTTTTACGTCAAATTTTGGCGGCGGCGCATGCGGCTGCCACCGGGTCCCCCAGGCGTTCCTCTGCTTGGGAATCTGCCGTTTCTAGACCCAGAACTTCACACTTACTTCGCAGAATTGGCCCGAAAATACGGCCCAATTGTAAAGCTTCAACTGGGTGGAAAGATTGGTATAATCGTCAACTCACCCTCTGTAGCACGTGAGGTGTTAAAGGATCACGATATCACTTTCGCCAATCACGACGTTCCTCAGGCTGGCCGAGCCGCCACGTACGGCGGTTATGACATAACCTGGACCCCATACGGACCCGAATGGCGGATATTGAGAAAAGTTTGTACAATCAAGATGCTTAGCAACGCCAGTTTGGACTCTGTTTATGAGCTCCGTCGTACAGAGGTCAGAAACACCGTGGCTAACTTGTACCAGCGAGCTGGGTCGGCGGTAAACGTGGGAGAGCAGGTGTTTTTGACGGTTTTCAATGTGGTTACAAGCATGTTGTGGGGTGGGTCAATGGAAGGGGATAAAATCAGGGACGACCTTGCTGCTGAGTTTAGAGAAGCGATTTCGGACATGACAGGGATATTGGGTAAGCCTAATGTTTCGGACTTTTTTCCGAGCTTGGCCCGTTTTGATTTGCAAGGAATTGAGAAACAAATGCTTAAGCTTGTTCTGAAATTGGACACCATTTTTGAAAAGATGATTGATAAACGATTGAGAATGACGAACGTTGATGAGAGTGCGACGAAAAATGATTTCTTGCAGTACTTACTTAAAATCAAAGATGAAGACGATTCCAAAACTCCTCTCACTATGGTTCAACTTAAAGCCTTGCTCATGGATATGGTGATTGGGGGAACAGACACATCCTCAAACACCATTGAATTTGCAATGGCAGAGATGATGAAGAACCCAAAAGTTTTAGAGAAAGCCAAGGAAGAACTAGCGGCTGTGGTTGGGGAACAGAACATTGTAGAAGAGTCCCATATACAGAGTTTGCCATATCTGAAAGCCATAATGAAAGAAACCTTGCGTCTTCGTCCAATTCTGCCGTTGCTAGTGCCGCGCTGCCCCAGCCACACCACCATCATCTCCAAATACACAATCCCAAAGGGCTCTCGAGTTTTCTTCAACGTTTGGGCCATTCACCGAGACCCCAATCATTGGGAGAATCCATTGGAGTTCGACCCAGAGAGGTTTTTCAATGGTAAATTCGATTTCAGTGGGAGTGATTTTCGTTACTTTCCATTTGGGTCTGGCAGAAGAAATTGTGTAGGGATAGCCATGGCGGAAAGAATGGTAATGTATTTGCTTGCTACGCTTTTGCATTCCTTTGATTGGAAATTGAAAGAAGGTAAGAAGATTGAAATCGAGGAGAAATTTGGGATTGTTTTAAAGATGAAGAAGCCTCTTGTTCTCATTCCAACGCCTAGACTATCAGTCCCCACTCTGTATCAGTAG | 1554 | 45.24 | MEPTSNFIHSLNFFDPNNQTRFLLTLFTGFLLLFYVKFWRRRMRLPPGPPGVPLLGNLPFLDPELHTYFAELARKYGPIVKLQLGGKIGIIVNSPSVAREVLKDHDITFANHDVPQAGRAATYGGYDITWTPYGPEWRILRKVCTIKMLSNASLDSVYELRRTEVRNTVANLYQRAGSAVNVGEQVFLTVFNVVTSMLWGGSMEGDKIRDDLAAEFREAISDMTGILGKPNVSDFFPSLARFDLQGIEKQMLKLVLKLDTIFEKMIDKRLRMTNVDESATKNDFLQYLLKIKDEDDSKTPLTMVQLKALLMDMVIGGTDTSSNTIEFAMAEMMKNPKVLEKAKEELAAVVGEQNIVEESHIQSLPYLKAIMKETLRLRPILPLLVPRCPSHTTIISKYTIPKGSRVFFNVWAIHRDPNHWENPLEFDPERFFNGKFDFSGSDFRYFPFGSGRRNCVGIAMAERMVMYLLATLLHSFDWKLKEGKKIEIEEKFGIVLKMKKPLVLIPTPRLSVPTLYQ | 517 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 4052485 | 4054412 | - | Lsi09G003850.1 | Lsi09g00385 | 669998 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi09g00385 | 517 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 448 | 457 | IPR017972 | GO:0005506|GO:0016705 | |
Lsi09g00385 | 517 | Pfam | Cytochrome P450 | 46 | 502 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00385 | 517 | PRINTS | P450 superfamily signature | 446 | 455 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00385 | 517 | PRINTS | P450 superfamily signature | 455 | 466 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00385 | 517 | PRINTS | P450 superfamily signature | 316 | 333 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00385 | 517 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00385 | 517 | PRINTS | E-class P450 group I signature | 409 | 433 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00385 | 517 | PRINTS | E-class P450 group I signature | 73 | 92 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00385 | 517 | PRINTS | E-class P450 group I signature | 325 | 351 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00385 | 517 | PRINTS | E-class P450 group I signature | 305 | 322 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00385 | 517 | PRINTS | E-class P450 group I signature | 455 | 478 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00385 | 517 | PRINTS | E-class P450 group I signature | 189 | 207 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00385 | 517 | PRINTS | E-class P450 group I signature | 368 | 386 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00385 | 517 | PRINTS | E-class P450 group I signature | 445 | 455 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00385 | 517 | PANTHER | OS08G0547900 PROTEIN | 14 | 517 | - | - | |
Lsi09g00385 | 517 | Gene3D | Cytochrome P450 | 36 | 505 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g00385 | 517 | PANTHER | CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED | 14 | 517 | - | - | |
Lsi09g00385 | 517 | SUPERFAMILY | Cytochrome P450 | 46 | 509 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi09g00383 | Lsi-Chr9:4037140 | Lsi09g00385 | Lsi-Chr9:4052485 | 8.29E-145 | dispersed | |
Lsi09g00385 | Lsi-Chr9:4052485 | Lsi09g00350 | Lsi-Chr9:3651984 | 5.05E-118 | dispersed | |
Lsi09g00384 | Lsi-Chr9:4044885 | Lsi09g00385 | Lsi-Chr9:4052485 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi09g00385 | - | - | csv:101213781 | 838.95 |