Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi09g00501 | ATGTATTGGCCCTCTATAAAACAAAGCTTAAGGCTCCTCAAAATTTCATTGTCAAGAGAAATGGCTTTCGACAAAGCACTGCCCTATATTCTCCTCGCCACCATGCTGATCGCGGCCGGGCCAACGGCAGCGCAGTTGAGCCCGACGTTCTACAACACTACATGCCCCAACTTGTCCTCCATTGTAGAAGACGTAGTTAGACAAGCTCTCCAAACCGATGCCCGAGCAGGCGCAAAACTCATTCGCTTTCATTTCCACGATTGTTTTGTCAATGGGTGTGATGGGTCTGTTCTACTGGAAGATTCAGTTGCAGACAGCATAGACAGTGAGCAAAACGCACGGGGAAATGAAGGAATACAAGGCCAAAATATTGTCGCCGACATCAAAACAGCGGTTGAAAATGCTTGTCCAAACCTCGTCTCCTGTGCTGACATCTTGGCCATTGCATCTAATTCATCCGTCGTCTTGGCAGGAGGAACGAGTTGGGAGGTTCAGCTAGGAAGAAGAGACAGTCTAATAGCAAATAGATCCGGAGCTGAAAGCAATCTTCCAAGTCCTTTTGAACCTCTTGCAAATCTTACTGTCAAGTTTGCAAATGTTGGTCTTGATTCTACTGATCTTGTCTCTTTATCTGGAGCGCACACGTTCGGTCGTTCAAGATGTCAATTCTTTCAAGGGCGATTGAATGACTTTAACAGAACAGGAATGCCAGATCCGAGTCTAGACCCAATCTACAGAGACATCCTTTTGGAGGCATGTCCTCAAGGCGGAGACAACAACCGGGTCAACCTGGACCCGACAACTCCTGACGAATTCGACAACAACTATTTCACCAATCTCCAAGGCAACCGTGGGCTTCTCACCAGCGATCAAGTGCTGTTCTCCCCTCCCGACACCGCCACCGCCGGTGACGTGAACCGCTTCGCAGCCAGCCAAGAAGTGTTCTTTGATGCCTTTGGAGCCTCCATGATTAAGATGGGAAATATTAGGCCTTTGACTGGAAATGATGGGGAGATTCGTTTAACTTGTTCTAGGATTAATCCTTTGCCTGCTGTTGCTGATATGTAA | 1068 | 47.66 | MYWPSIKQSLRLLKISLSREMAFDKALPYILLATMLIAAGPTAAQLSPTFYNTTCPNLSSIVEDVVRQALQTDARAGAKLIRFHFHDCFVNGCDGSVLLEDSVADSIDSEQNARGNEGIQGQNIVADIKTAVENACPNLVSCADILAIASNSSVVLAGGTSWEVQLGRRDSLIANRSGAESNLPSPFEPLANLTVKFANVGLDSTDLVSLSGAHTFGRSRCQFFQGRLNDFNRTGMPDPSLDPIYRDILLEACPQGGDNNRVNLDPTTPDEFDNNYFTNLQGNRGLLTSDQVLFSPPDTATAGDVNRFAASQEVFFDAFGASMIKMGNIRPLTGNDGEIRLTCSRINPLPAVADM | 355 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 5237688 | 5241743 | + | Lsi09G005010.1 | Lsi09g00501 | 670114 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi09g00501 | 355 | PRINTS | Plant peroxidase signature | 263 | 278 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi09g00501 | 355 | PRINTS | Plant peroxidase signature | 120 | 133 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi09g00501 | 355 | PRINTS | Plant peroxidase signature | 279 | 296 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi09g00501 | 355 | PRINTS | Plant peroxidase signature | 139 | 149 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi09g00501 | 355 | PRINTS | Plant peroxidase signature | 55 | 74 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi09g00501 | 355 | PRINTS | Plant peroxidase signature | 79 | 99 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi09g00501 | 355 | PRINTS | Plant peroxidase signature | 158 | 173 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi09g00501 | 355 | PRINTS | Plant peroxidase signature | 321 | 334 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi09g00501 | 355 | PRINTS | Plant peroxidase signature | 205 | 217 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi09g00501 | 355 | Pfam | Peroxidase | 62 | 301 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi09g00501 | 355 | PANTHER | PEROXIDASE 58 | 37 | 347 | - | - | |
Lsi09g00501 | 355 | PRINTS | Haem peroxidase superfamily signature | 265 | 280 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi09g00501 | 355 | PRINTS | Haem peroxidase superfamily signature | 77 | 91 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi09g00501 | 355 | PRINTS | Haem peroxidase superfamily signature | 140 | 157 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi09g00501 | 355 | PRINTS | Haem peroxidase superfamily signature | 206 | 221 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi09g00501 | 355 | PRINTS | Haem peroxidase superfamily signature | 158 | 170 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi09g00501 | 355 | ProSiteProfiles | Plant heme peroxidase family profile. | 45 | 347 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi09g00501 | 355 | CDD | secretory_peroxidase | 45 | 346 | IPR033905 | GO:0004601|GO:0042744 | |
Lsi09g00501 | 355 | Gene3D | - | 50 | 347 | - | - | |
Lsi09g00501 | 355 | PANTHER | PEROXIDASE 72-RELATED | 37 | 347 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi09g00501 | 355 | SUPERFAMILY | Heme-dependent peroxidases | 45 | 348 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi09g00501 | 355 | Gene3D | Peroxidase, domain 2 | 184 | 326 | - | - | |
Lsi09g00501 | 355 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 206 | 216 | IPR019793 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi09g00501 | Lsi-Chr9:5237688 | Lsi10g01002 | Lsi-Chr10:14323027 | 1.19E-144 | dispersed | |
Lsi10g00994 | Lsi-Chr10:14259277 | Lsi09g00501 | Lsi-Chr9:5237688 | 2.12E-50 | dispersed | |
Lsi10g01503 | Lsi-Chr10:19247609 | Lsi09g00501 | Lsi-Chr9:5237688 | 1.31E-78 | dispersed | |
Lsi09g00501 | Lsi-Chr9:5237688 | Lsi01g00641 | Lsi-Chr1:5166953 | 8.81E-96 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi09g00501 | K00430 | - | csv:101215530 | 586.26 |