Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi09g00644 ATGTATTTGGAGGAAAAGTATCCTCAGCATCCTTTGTTGCCTCGTGATCTTGTTAAAAGGGCTATTAATCACCAGGCTGCAAATATTGTTTCTTCAAGCATACAACCTCTTCAAAATTTAATTGTTGAGAAGTACATCGAGGAAAAATGTGGACCAGAGGAGAAACTTTCTTGGGTTCACATGATCATTGGAAAAGGATTTTTAGCACTTGAAAAGTTACTAACGGTTCATGCTGGAAAATTTGCTACTGGAGACGAAATTTATCTGGCAGACTTGTTTTTGGCACCTCAACTTCACCGTGCCATTGAAACATTCAATGTTGACGTGTCCAAGTTTCCAATTCTATCAAGGTTGTATGAGGAATACAAGAAGGTACCAGCATTTCAAGATGCAGCACCAGAGAACCAACCTGATGCTCCTGCTCAAAATTCTTGCTAA 438 39.27 MYLEEKYPQHPLLPRDLVKRAINHQAANIVSSSIQPLQNLIVEKYIEEKCGPEEKLSWVHMIIGKGFLALEKLLTVHAGKFATGDEIYLADLFLAPQLHRAIETFNVDVSKFPILSRLYEEYKKVPAFQDAAPENQPDAPAQNSC 145
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7196823 7204000 + Lsi09G006440.1 Lsi09g00644 670257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi09g00644 145 PANTHER S-CRYSTALLIN-RELATED 1 141 - -
Lsi09g00644 145 PANTHER MALEYLACETOACETATE ISOMERASE 1 141 - -
Lsi09g00644 145 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 16 141 IPR010987 -
Lsi09g00644 145 SUPERFAMILY GST C-terminal domain-like 11 140 IPR036282 -
Lsi09g00644 145 CDD GST_C_Zeta 17 136 IPR034330 -
Lsi09g00644 145 Gene3D - 13 142 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi09g00644 Lsi-Chr9:7196823 Lsi10g00753 Lsi-Chr10:10352564 5.53E-74 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi09g00644 K01800 - csv:116401624 265.388