Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi09g00711 | ATGGACAGGGCAAGTTTCAGGCACACTGCTTCTGCAATTACTGTCTTTGCACATATTTTTGGTCTCACTGCCTGCATTCTTATGCTTGTTTGGTTGCTGCATTATCGTGGCGGCCTCGCCTACGATTCTCCCAATCCCGACCTTGTTTTCAATTGCCATCCATTCTTCATGCTCCTTGGTTTCGTGTTCATGTCGGGGGAAGCAATGATGGCATACAAGACAGTAAGGGCAGAAAAGAAAACAAAGAAGATAGTTCACATGGCTCTGCATTTTGTAGCCATTTGCATGGGAATTGCAGGGATAAACGCTGCTTTCAAGTTTCATGATCAGGTGAACTTGGAAGATATGTTTAGTTTACATTCATGGATTGGCATTGTCACTTTCTGCCTTTATGGCTTACAGTGGCTGTTGGGACTATGTACATTCTTGTTTCCAGGAGCAGATGCAGCGACTAAGGCCAGACTGCTGCCATGGCACATAAGTGGAGGAAGAGCTTTGCTGCTGATGATAATATGCACAGCCTTGACTGGCTTGTCTGAGAAGGCTACTTCTTTGAGACTGGCTGGCAACCATGAGTCTCGTTTGCTTAACTTCACTGCTTTCTTTGTCCTCCTCTTTGGCATTTCCATTGACCTCTCCATCGGTTTTGCTCGGTTTATGCACGCTGATCTCACCGTTTAG | 681 | 45.67 | MDRASFRHTASAITVFAHIFGLTACILMLVWLLHYRGGLAYDSPNPDLVFNCHPFFMLLGFVFMSGEAMMAYKTVRAEKKTKKIVHMALHFVAICMGIAGINAAFKFHDQVNLEDMFSLHSWIGIVTFCLYGLQWLLGLCTFLFPGADAATKARLLPWHISGGRALLLMIICTALTGLSEKATSLRLAGNHESRLLNFTAFFVLLFGISIDLSIGFARFMHADLTV | 226 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 8102080 | 8103806 | - | Lsi09G007110.1 | Lsi09g00711 | 670324 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi09g00711 | 226 | Gene3D | - | 6 | 217 | - | - | |
Lsi09g00711 | 226 | SMART | 561_7 | 52 | 178 | IPR006593 | - | |
Lsi09g00711 | 226 | Pfam | Eukaryotic cytochrome b561 | 53 | 183 | IPR006593 | - | |
Lsi09g00711 | 226 | PANTHER | CYTOCHROME B561-RELATED | 3 | 217 | IPR043205 | GO:0016491 | |
Lsi09g00711 | 226 | ProSiteProfiles | Cytochrome b561 domain profile. | 16 | 215 | IPR006593 | - | |
Lsi09g00711 | 226 | CDD | Cyt_b561_ACYB-1_like | 43 | 185 | - | - | |
Lsi09g00711 | 226 | PANTHER | TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 3-RELATED | 3 | 217 | - | - | |
Lsi09g00711 | 226 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 25 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi05g00005 | Lsi-Chr5:72543 | Lsi09g00711 | Lsi-Chr9:8102080 | 7.41E-59 | dispersed | |
Lsi09g00711 | Lsi-Chr9:8102080 | Lsi04g00298 | Lsi-Chr4:2998833 | 3.13E-34 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi09g00711 | K08360 | - | csv:101208884 | 417.542 |