Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi09g00711 ATGGACAGGGCAAGTTTCAGGCACACTGCTTCTGCAATTACTGTCTTTGCACATATTTTTGGTCTCACTGCCTGCATTCTTATGCTTGTTTGGTTGCTGCATTATCGTGGCGGCCTCGCCTACGATTCTCCCAATCCCGACCTTGTTTTCAATTGCCATCCATTCTTCATGCTCCTTGGTTTCGTGTTCATGTCGGGGGAAGCAATGATGGCATACAAGACAGTAAGGGCAGAAAAGAAAACAAAGAAGATAGTTCACATGGCTCTGCATTTTGTAGCCATTTGCATGGGAATTGCAGGGATAAACGCTGCTTTCAAGTTTCATGATCAGGTGAACTTGGAAGATATGTTTAGTTTACATTCATGGATTGGCATTGTCACTTTCTGCCTTTATGGCTTACAGTGGCTGTTGGGACTATGTACATTCTTGTTTCCAGGAGCAGATGCAGCGACTAAGGCCAGACTGCTGCCATGGCACATAAGTGGAGGAAGAGCTTTGCTGCTGATGATAATATGCACAGCCTTGACTGGCTTGTCTGAGAAGGCTACTTCTTTGAGACTGGCTGGCAACCATGAGTCTCGTTTGCTTAACTTCACTGCTTTCTTTGTCCTCCTCTTTGGCATTTCCATTGACCTCTCCATCGGTTTTGCTCGGTTTATGCACGCTGATCTCACCGTTTAG 681 45.67 MDRASFRHTASAITVFAHIFGLTACILMLVWLLHYRGGLAYDSPNPDLVFNCHPFFMLLGFVFMSGEAMMAYKTVRAEKKTKKIVHMALHFVAICMGIAGINAAFKFHDQVNLEDMFSLHSWIGIVTFCLYGLQWLLGLCTFLFPGADAATKARLLPWHISGGRALLLMIICTALTGLSEKATSLRLAGNHESRLLNFTAFFVLLFGISIDLSIGFARFMHADLTV 226
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 8102080 8103806 - Lsi09G007110.1 Lsi09g00711 670324
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lsi09g00711 226 Gene3D - 6 217 - -
Lsi09g00711 226 SMART 561_7 52 178 IPR006593 -
Lsi09g00711 226 Pfam Eukaryotic cytochrome b561 53 183 IPR006593 -
Lsi09g00711 226 PANTHER CYTOCHROME B561-RELATED 3 217 IPR043205 GO:0016491
Lsi09g00711 226 ProSiteProfiles Cytochrome b561 domain profile. 16 215 IPR006593 -
Lsi09g00711 226 CDD Cyt_b561_ACYB-1_like 43 185 - -
Lsi09g00711 226 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 3-RELATED 3 217 - -
Lsi09g00711 226 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi05g00005 Lsi-Chr5:72543 Lsi09g00711 Lsi-Chr9:8102080 7.41E-59 dispersed
Lsi09g00711 Lsi-Chr9:8102080 Lsi04g00298 Lsi-Chr4:2998833 3.13E-34 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi09g00711 K08360 - csv:101208884 417.542