Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi09g00728 ATGATGAATAAAGCATTGGGCGCCTTTGGAGATCTTGGAGATGATGAGGAATTGGGACCTGCTGACTGGCCTACAGTTAAAAGACATATTACAAGTCTCAGTCACGTGGAGGGGGAACCATTGCACCCGCACAATGCATTTGAAAGTGATCAAAATGTTCGCTCTATGAATTTGAGAGACATTCGTTTGCGACTTTTGAATGGTGTTCAAGCTGCTTACTGGGGTATGCTTGATGAGGGAAGGATAACACAAAGTACTGCAAATATCTTGATGCAATCTGTGGATGAAGCCCTTGATCTGGTTGCAAATGAGCCCTTATGTGATTGGAAAGGTTTAAAAGCGAATGTCCATTTTCCAAATTATTACAAGTTCCTTCAGACAAGCATTTTTCCTCAGAAGTTGGTTACATATTTCACTGTGGAAAGATTGGAATCCGGATGTTATATTTGTGCTGCGTTTCTCCGTGCACATAGAATTGCAAGACGACAGCTTCATGAGTTTATAGGTGATAGTGATATTGCTTCTACTGTAATTAATGAAAGTGAAGCTGAGGGTGAAGAAGCACGAAAGTTTCTAGAAGATGTTCGTGAGACATTTCCTCAGGTTTTGCGTGTTGTTAAAACCAGACAAGTAACATATTCAGTGCTCAACCATTTAATTGAATATGTCCAAAATCTGGAGAAGGTTGGCCTATTAGAAGAGAAAGAGATGTTGCATCTTCATGATGCTGTTCAGACTGACTTGAAAAGGCTTCTAAGAAATCCTCCTCTTTTAAAGGTTCCCAAAATGCGCAAGTTAATCAGTGCCCATCCATTTCTTGGCGCACTTCCTCCTTTAGTGCGCGAACCACTTGAAGTTTCAACAAAAGAAGTGATGAAACTACGTGGTGTGACACTTTACAAGGAAGGTTCAAAGCCTACTGGTGTTTGGCTTATATCCAACGGAGTGGTAAAGTGGGTAAGTAAGAGCATGAGAAACAAGTTCTCCTTACACCCTACATTTACTCATGGAAGTACTTTGGGCCTATATGAATTGCTTACTGGGAAGCCATGCATCTGTGACATGATTACAGATTCCGTCGTTCTCTCTTTTTTTATTGAACATGACAAGTTTCTTGCAGTACTTAGATCAGATCCTTCGGTTGAAGACTTCTTGTGGCAGGAAAGTTCCATTGTTCTTGCCAAACTCTTGCTTCCACAAGTATTTGAGAAAATGGAAATGAGAGATTTGAGAGTTCTTGTTGTTGAAAGGTCAGTGATGACTACGCATATAGCAGGAGAAACAATAGAAATTCCACGCCATTCTATTGGCCTTTTGTTAGAAGGATTTATCAGAAATGGCATCCAAGAGGAACTGATAGCATCACCTGCTGTGTTGTTCTCTTCGCACGGGCATCCGAGCTTCCATAACATGGAAAACTCAGAACTCCATAAGGTTTCAGCCGTAGTCGGGGACGGAAGAGCTGATAGTATTTTGGAATCAGACTACCGCATCGACTATGATTCAAGGATGAGTTGTTCTAGTTTTTCTCATCAAGGCTCCTATTATGAAGTTGAAACAAGATCAAGAGTAATCATTTTTGACATGGCTGCGCTTCAATCAGATGACAATCTAAATCGGTCATCATCTTTCATACATTCTGTTGATCACCCTCAAAGATCTCTGAGCAGAGATCACTCTGGTCTTATGAGTTGGCCTCAACTGCTTTCCAAGCCTAGACCACCACAGAAGCAGAAATCTGAAAGAACTGAGCGTCCAGCTGATAGCTTGTCTGCAAAGGCCATGCAACTAAGCATATACGGCAGCATGGTATGTTCAGTTGTTGATATTCGTCAGCGGACTAAGAGTTTTCCAGGCAATATTGCTGAAGCATCTCATAGCCGGTCAAATCCTGCAATTGATTCATATAAAGGTGTTCCCCTTCCATATGTCAAATCAGAAGGAGCTGGTACATTGAAGAAGAGGCTTGATGCAAGGAAGTTACCAATAAGCACTGTTAAACCTCCACAAGAAAAACCAGTTCCTAATGAGAGAAATGCAAGGGATGATTCAAGTGAGGAATCGGGTGGTGAGGATGATATCATAGTGAGAATTGATTCACCAAGTGTGCTTTCATTTCACCAGGTTCCATGA 2133 41.4 MMNKALGAFGDLGDDEELGPADWPTVKRHITSLSHVEGEPLHPHNAFESDQNVRSMNLRDIRLRLLNGVQAAYWGMLDEGRITQSTANILMQSVDEALDLVANEPLCDWKGLKANVHFPNYYKFLQTSIFPQKLVTYFTVERLESGCYICAAFLRAHRIARRQLHEFIGDSDIASTVINESEAEGEEARKFLEDVRETFPQVLRVVKTRQVTYSVLNHLIEYVQNLEKVGLLEEKEMLHLHDAVQTDLKRLLRNPPLLKVPKMRKLISAHPFLGALPPLVREPLEVSTKEVMKLRGVTLYKEGSKPTGVWLISNGVVKWVSKSMRNKFSLHPTFTHGSTLGLYELLTGKPCICDMITDSVVLSFFIEHDKFLAVLRSDPSVEDFLWQESSIVLAKLLLPQVFEKMEMRDLRVLVVERSVMTTHIAGETIEIPRHSIGLLLEGFIRNGIQEELIASPAVLFSSHGHPSFHNMENSELHKVSAVVGDGRADSILESDYRIDYDSRMSCSSFSHQGSYYEVETRSRVIIFDMAALQSDDNLNRSSSFIHSVDHPQRSLSRDHSGLMSWPQLLSKPRPPQKQKSERTERPADSLSAKAMQLSIYGSMVCSVVDIRQRTKSFPGNIAEASHSRSNPAIDSYKGVPLPYVKSEGAGTLKKRLDARKLPISTVKPPQEKPVPNERNARDDSSEESGGEDDIIVRIDSPSVLSFHQVP 710
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8368155 8377075 + Lsi09G007280.1 Lsi09g00728 670341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi09g00728 710 MobiDBLite consensus disorder prediction 656 697 - -
Lsi09g00728 710 MobiDBLite consensus disorder prediction 674 694 - -
Lsi09g00728 710 ProSiteProfiles cAMP/cGMP binding motif profile. 272 375 IPR000595 -
Lsi09g00728 710 Gene3D Jelly Rolls 259 390 IPR014710 -
Lsi09g00728 710 PANTHER SODIUM/HYDROGEN EXCHANGER 1 463 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lsi09g00728 710 PANTHER - 1 463 - -
Lsi09g00728 710 Pfam Cyclic nucleotide-binding domain 295 378 IPR000595 -
Lsi09g00728 710 MobiDBLite consensus disorder prediction 549 590 - -
Lsi09g00728 710 CDD CAP_ED 272 381 IPR000595 -
Lsi09g00728 710 SUPERFAMILY cAMP-binding domain-like 259 386 IPR018490 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi09g00728 - - bhj:120067857 1249.96