Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lsi09g00815 | ATGACTGAATCATTAGGTCAGATGGAGAATAATAATGTTATGGCATCTGTGCACGCCACAGTTTTTAAGGAATCAGAGGATCTTGAGGGGAAAAGCAGCAAAATTGAGGGATATGACTTCAATCAAGGACTAAGTTACTCCAACCTTATAAGGTCCATGATCTCCACTGGATTTCAAGCCTCCAATTTGGGAGATGCCATAGAAGTCGTCAATAAAATGTTAGACTGGAGGCTTGCTGATGAGAATTTAACAGAAGATTGCTCTGAGGAGGAGAAGGATCCAATCTTTAGGGAGTCGACGAGGTGCAAAGTGTTTCTTGGTTTCACTTCCAATCTTATTTCTTCGGGCGTTAGAGACACAATTCGTTACCTTGTTGAACACCATATGGTTGATGTGATTGTCACTACAACTGGTGGTATTGAAGAAGATCTTATAAAATGTCTTGCTCCCACATATAAAGGTGACTTTTCTCTTCCTGGAGCAGTTCTTCGATCAAAAGGGTTGAATCGCATTGGTAATTTGTTGGTTCCTAATGCTAACTACTGCAAATTTGAGGATTGGATAATCCCAATTTTGGATCAGATGTTGAAGGAACAACTTGAAGAGAATGTACTATGGACACCGTCCAAGGTAACCCGACGCTTGGGAAGAGAAATAAATGATGAGAGTTCATATCTTTATTGGGCCTATAAGAATCTTAAAATTTTAAAGACGCAGCTCTGGTTGAGAAACCTACATAGTTTACTTATGATGTCAAGATCTTTATTAGGTCCAGACAGCCACAATTTGGACCACGAAGTTGTAGAAGTTTTGCAATTTAAAACAGATGCATTTGATATTATGCAGAACAATATTCCAGTCTTCTGCCCAGGATTAACAGATGGGTCATTGGGAGACATGTTGTACTTCCACTCTTTTCGTAATCCTGGCTTGATCATTGACGTCGTTCAAGACTATGCTGTCTTCATTAACACCGCTCAAGAGTTCGATGGAAGTGACTCTGGAGCTCGCCCAGATGAGGCTGTCTCTTGGGGCAAAATTCGAGGTTCGGCCAAGACTGTCAAGGTACATTGCGACGCCACAATCGCTTTCCCATTGCTCGTTGCAGAAACATTTGCCTCAAGAAGAGAAAAGGAAAAGGAGATCTCGTTCACCAAAAGCTACAAATCACAAATCACACCATCATTGCTTGACAGTTGCACATTGATCTCGTTCAGGGGTTCGAATCTATTGCCCCAAAAATCCACCGAATTCCAATTTCAGCCCGAAATAGGCGAAGAAAGAAGAAAGGGCCAAAGAAGAGAGAAAGAGCTGAAGAACATCTCAACTTCGGCTTCCACCGGCGACAACCCTCTTTTTCCCCATTTCATTCTTCCATATTCACTGATTATGCCAGACGTGCAAGCCCTTGTGAATGATTTCGTTATCAAGCTTAAGAGGCGTAAAATTGAGGGCTCCTTGGCCACCGCGAAGCATACGGCTGAATTGCTTCGGTCTGTCATTTCACAGCAGCGAATACCCTACACGAATCAGGCGGCTGCTTTGATTGATGCTGTGAAAGCTGTTGGCGAGCAGCTGATTGCTGCGAATCCTGTTGGTAGATATATTAATTTTTTTTATTATAGCTTAAAACCCCAGTCTGTCTGTTTGGGATTTTACCCTTTACAAAATTCAACTTATTTCCATGGCTGCTTCTTATTTAGGCTGAAAATGAGTCAGCTTGCTGTGGGCAATATTGTGAGGCGGGTTTTGCACATTATTAGAGAGGAGGATCTCTCACTCACCACAGCTTCTATTGCTGGGTTGAGCTTATCGGCAGTTAGTGATGATGAAGATGACATTGAAAAAGATGATCGCCCGGTCCTCTCAGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACTTTGCGGCCACCTTCCTTGCAAACTCTTCTTGAGGATGTTCCTAATCAAACATCGGTTCATCAAACTTCATCATCTGGAGCTGCTGATAAAAGTTCAAGGAGTCGGAAGCTCAAGCATGATGTAATTGAAGCTGTTAATGAGCTTATTCAGGATATTGCAACTTGTCATGAACAGATTGCTGAGCAAGCAGTGGAGCACATTCATCAGAACGAGGTAATATTAACTTTGGGGAGTTCCAGAACAGTATTGGAATTTCTTTGTGCTGCTAAGGAGAAGAAAAGGTCCTTCCGGGTGTTTGTTGCTGAGGGTGCTCCAAGTGGGATGGACATTACAACTGATGAGATGGTGTCATCTTCAAATCTGTTCTGCAAGGTAATAGTTGGAGCTCATGCTGTCATGGCAAATGGTGGTGTCATGGCACCAGTCGGATTGAATATGGTGGCTCTTGCAGCTAAAAGGCATGCTGTTCCTTTTGTCGTGCTAGCTGGAAGTCACAAGGTGCTGTTCCTTTTCACGAAATTTTCTTCTATTATAATTCTACCCAAAATTTTATGCCCTTTGTATCCTCACAATCCCGAAGTTCTACTCAATGAACTGAGGTCCCCATCAGAGCTACTGGACTTTGGTGAATTTTCAGATTGCATGGACTTTGGAACTAACTCTGGTTCTCCTCTTCTCCATGTAGTCAACCCTACATTTGACTATGTGCCACCATCACTTGTTAGTTTATTTATTACTGACACAGGTGGCCATAACTCATCATACATGTATCGGCTTATTGCTGATTACTATTCAGCCGATGATTTGAAGTATAAAACTGTTCTCTTGAGGATGGCATCTGGAAGTCCTTATTTTGATGATTTGCGGAGCAAACCAGAGGTTATTGATCCTCCCCAGAATGAAGATATGATGGACATCAGGGAAACTGTGGACGATCCAGTTCAAAATGAACTTAAACCGAACGTCGCTGTTTCCAGCAGCGTTCGTGAGCTTTTGGAATGCCCAGTGTGTTTGAATGCAATGTACCCTCCAATACATCAGTGTTCAAATGGCCACACACTGTGCTCTGGTTGTAAGCCTCGGGTGCACAATCGTTGCCCTACGTGTAGGCATGAACTTGGCAATATTAGATGCCTTGCGTTGGAGAAGGTGGCTGCATCTCTAGAACTTCCGTGTAAATATCATACCTATGGTTGCATTGGCATATATCCATATTACAGCAAGGTCAAACATGAATCCCAATGTGTTTATAGACCTTATAGCTGTCCATATGCTGGATCCGAATGTTCAGTTGTCGGTGATATTCCCTATTTGGTGACCCACCTGAAAGACGATCATAAAGTAGACATGCACAGTGGAAGCACATTCAACCATCGTTATGTAAAATCAAACCCACAAGAAGTTGAAAATGCAACGTGGATGCTAACGGTAATTTTCCTCACAACCACGCTGCCCACTCTGTTCCTTGCCCTCTTAGGCAGGCAAATCTCATTGGCATTTCTTATGCACATTGTGAGCATTAGAATCATTTGCTTTGGTCAGTACTTTTGCCTGCATTTCGAAGCTTTCCAGCTTGGGATGGCTCCAGTATACATAGCTTTTTTACGGTTCATGGGCGACGATAATGATGCAAAGAACTACAGCTATAGTCTTGAGGTGGGTGGCAATGGGAGGAAGATGGTATGGCAAGGGGTGCCCAGAAGCATCAGGGACAGCCATCGAAAAGTTCGGGACAGTTTCGATGGGCTCATTATCCAACGCAACATGGCTCTCTTTTTCTCCGGAGGGGACCGGAAGGAACTAAAGCTTAGGGTGACTGACCTGGAAGTAGGTTAA | 3738 | 43.29 | MTESLGQMENNNVMASVHATVFKESEDLEGKSSKIEGYDFNQGLSYSNLIRSMISTGFQASNLGDAIEVVNKMLDWRLADENLTEDCSEEEKDPIFRESTRCKVFLGFTSNLISSGVRDTIRYLVEHHMVDVIVTTTGGIEEDLIKCLAPTYKGDFSLPGAVLRSKGLNRIGNLLVPNANYCKFEDWIIPILDQMLKEQLEENVLWTPSKVTRRLGREINDESSYLYWAYKNLKILKTQLWLRNLHSLLMMSRSLLGPDSHNLDHEVVEVLQFKTDAFDIMQNNIPVFCPGLTDGSLGDMLYFHSFRNPGLIIDVVQDYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRREKEKEISFTKSYKSQITPSLLDSCTLISFRGSNLLPQKSTEFQFQPEIGEERRKGQRREKELKNISTSASTGDNPLFPHFILPYSLIMPDVQALVNDFVIKLKRRKIEGSLATAKHTAELLRSVISQQRIPYTNQAAALIDAVKAVGEQLIAANPVGRYINFFYYSLKPQSVCLGFYPLQNSTYFHGCFLFRLKMSQLAVGNIVRRVLHIIREEDLSLTTASIAGLSLSAVSDDEDDIEKDDRPVLSAAAVAAAARSTLRPPSLQTLLEDVPNQTSVHQTSSSGAADKSSRSRKLKHDVIEAVNELIQDIATCHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSFRVFVAEGAPSGMDITTDEMVSSSNLFCKVIVGAHAVMANGGVMAPVGLNMVALAAKRHAVPFVVLAGSHKVLFLFTKFSSIIILPKILCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDFGTNSGSPLLHVVNPTFDYVPPSLVSLFITDTGGHNSSYMYRLIADYYSADDLKYKTVLLRMASGSPYFDDLRSKPEVIDPPQNEDMMDIRETVDDPVQNELKPNVAVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYHTYGCIGIYPYYSKVKHESQCVYRPYSCPYAGSECSVVGDIPYLVTHLKDDHKVDMHSGSTFNHRYVKSNPQEVENATWMLTVIFLTTTLPTLFLALLGRQISLAFLMHIVSIRIICFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNDAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTDLEVG | 1245 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 9337291 | 9366264 | + | Lsi09G008150.1 | Lsi09g00815 | 670428 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lsi09g00815 | 1245 | Gene3D | Deoxyhypusine synthase | 16 | 233 | IPR036982 | GO:0008612 | |
| Lsi09g00815 | 1245 | MobiDBLite | consensus disorder prediction | 646 | 669 | - | - | |
| Lsi09g00815 | 1245 | MobiDBLite | consensus disorder prediction | 646 | 664 | - | - | |
| Lsi09g00815 | 1245 | SUPERFAMILY | TRAF domain-like | 1021 | 1111 | - | - | |
| Lsi09g00815 | 1245 | Pfam | Seven in absentia protein family | 1010 | 1240 | IPR018121 | GO:0005737|GO:0006511|GO:0007275 | |
| Lsi09g00815 | 1245 | ProSiteProfiles | Zinc finger SIAH-type profile. | 1021 | 1081 | IPR013010 | GO:0008270 | |
| Lsi09g00815 | 1245 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE DIS1 | 1143 | 1241 | - | - | |
| Lsi09g00815 | 1245 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE DIS1 | 918 | 1112 | - | - | |
| Lsi09g00815 | 1245 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1021 | 1076 | IPR013083 | - | |
| Lsi09g00815 | 1245 | Gene3D | Deoxyhypusine synthase | 279 | 317 | IPR036982 | GO:0008612 | |
| Lsi09g00815 | 1245 | Gene3D | Deoxyhypusine synthase | 318 | 384 | IPR036982 | GO:0008612 | |
| Lsi09g00815 | 1245 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 466 | 902 | IPR037171 | - | |
| Lsi09g00815 | 1245 | ProSiteProfiles | Zinc finger RING-type profile. | 968 | 1004 | IPR001841 | - | |
| Lsi09g00815 | 1245 | SUPERFAMILY | DHS-like NAD/FAD-binding domain | 16 | 232 | IPR029035 | - | |
| Lsi09g00815 | 1245 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 931 | 1020 | IPR013083 | - | |
| Lsi09g00815 | 1245 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE SIAH | 918 | 1112 | - | - | |
| Lsi09g00815 | 1245 | SUPERFAMILY | RING/U-box | 962 | 1009 | - | - | |
| Lsi09g00815 | 1245 | Pfam | Deoxyhypusine synthase | 49 | 318 | IPR002773 | GO:0008612 | |
| Lsi09g00815 | 1245 | CDD | RING-HC_SIAHs | 966 | 1004 | - | - | |
| Lsi09g00815 | 1245 | Gene3D | - | 689 | 897 | IPR042529 | - | |
| Lsi09g00815 | 1245 | Pfam | Initiation factor 2 subunit family | 660 | 885 | IPR000649 | GO:0044237 | |
| Lsi09g00815 | 1245 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE SIAH | 1143 | 1241 | - | - | |
| Lsi09g00815 | 1245 | SUPERFAMILY | TRAF domain-like | 1144 | 1240 | - | - | |
| Lsi09g00815 | 1245 | Gene3D | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 1124 | 1240 | IPR008974 | GO:0005515 | |
| Lsi09g00815 | 1245 | SUPERFAMILY | DHS-like NAD/FAD-binding domain | 281 | 376 | IPR029035 | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lsi09g00815 | K03754 | EIF2B2; translation initiation factor eIF-2B subunit beta | - | csv:101220366 | 630.172 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lsi04g00034 | Lsi-Chr4:495319 | Lsi09g00815 | Lsi-Chr9:9337291 | 0 | dispersed | |
| Lsi06g00347 | Lsi-Chr6:3810851 | Lsi09g00815 | Lsi-Chr9:9337291 | 2.27E-07 | dispersed | |
| Lsi06g01356 | Lsi-Chr6:24139308 | Lsi09g00815 | Lsi-Chr9:9337291 | 3.11E-07 | dispersed | |
| Lsi06g01357 | Lsi-Chr6:24147933 | Lsi09g00815 | Lsi-Chr9:9337291 | 4.79E-08 | dispersed | |
| Lsi09g00815 | Lsi-Chr9:9337291 | Lsi09g01813 | Lsi-Chr9:26927415 | 2.71E-144 | dispersed |
Syn-Families
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Lsi11g00931 | . | 82 | 598 | C3H Transcription Factor Family | AT2G31510 | 72.6 | 2.1e-225 | 778.5 | |
| Lsi08g00360 | . | 86 | 512 | C3H Transcription Factor Family | AT2G31510 | 79.9 | 7.3e-215 | 743.4 | |
| Lsi11g00931 | . | 51 | 572 | C3H Transcription Factor Family | AT2G31770 | 53.1 | 9.4e-163 | 570.5 | |
| Lsi08g00360 | . | 17 | 505 | C3H Transcription Factor Family | AT2G31770 | 53.8 | 2.1e-154 | 542.7 | |
| Lsi11g00931 | . | 65 | 557 | C3H Transcription Factor Family | AT2G31760 | 54.7 | 1.2e-162 | 570.1 | |
| Lsi08g00360 | . | 74 | 512 | C3H Transcription Factor Family | AT2G31760 | 57.8 | 7.6e-154 | 540.8 | |
| Lsi01g01180 | . | 8 | 170 | C3H Transcription Factor Family | AT5G06490 | 53.6 | 6.9e-47 | 184.1 | |
| Lsi01g01180 | . | 8 | 170 | C3H Transcription Factor Family | AT5G06490 | 53.6 | 6.9e-47 | 184.1 | |
| Lsi03g00188 | . | 81 | 300 | C3H Transcription Factor Family | AT3G02290 | 62.7 | 1.3e-73 | 273.1 | |
| Lsi06g00932 | . | 2 | 324 | C3H Transcription Factor Family | AT1G11020 | 70.4 | 6.2e-130 | 460.7 | |
| Lsi07g00675 | . | 62 | 221 | C3H Transcription Factor Family | AT1G50440 | 75.6 | 3.8e-68 | 255.0 | |
| Lsi01g01995 | . | 2 | 324 | C3H Transcription Factor Family | AT5G08750 | 59.2 | 7.6e-100 | 360.9 | |
| Lsi03g00937 | . | 1 | 482 | C3H Transcription Factor Family | AT3G16090 | 63.4 | 2.8e-161 | 565.5 | |
| Lsi03g00188 | . | 77 | 300 | C3H Transcription Factor Family | AT5G38895 | 56.0 | 3.4e-70 | 262.3 | |
| Lsi08g01421 | . | 16 | 227 | C3H Transcription Factor Family | AT1G19310 | 67.0 | 1.8e-78 | 289.3 | |
| Lsi01g01051 | . | 16 | 225 | C3H Transcription Factor Family | AT1G19310 | 61.2 | 1.3e-70 | 263.1 | |
| Lsi01g00729 | . | 9 | 315 | C3H Transcription Factor Family | AT2G22120 | 66.8 | 3.4e-116 | 415.2 | |
| Lsi08g00926 | . | 33 | 165 | C3H Transcription Factor Family | AT5G07040 | 61.8 | 9.9e-44 | 173.3 | |
| Lsi06g01347 | . | 1 | 403 | C3H Transcription Factor Family | AT1G18470 | 71.2 | 4.8e-170 | 594.3 | |
| Lsi11g00931 | . | 51 | 572 | C3H Transcription Factor Family | AT2G31770 | 53.1 | 9.4e-163 | 570.5 | |
| Lsi08g00360 | . | 17 | 505 | C3H Transcription Factor Family | AT2G31770 | 53.8 | 2.1e-154 | 542.7 | |
| Lsi11g00931 | . | 65 | 557 | C3H Transcription Factor Family | AT2G31760 | 54.7 | 1.2e-162 | 570.1 | |
| Lsi08g00360 | . | 74 | 512 | C3H Transcription Factor Family | AT2G31760 | 57.8 | 7.6e-154 | 540.8 | |
| Lsi02g01811 | . | 43 | 278 | C3H Transcription Factor Family | AT5G55970 | 67.4 | 1.7e-95 | 346.3 | |
| Lsi01g01995 | . | 2 | 324 | C3H Transcription Factor Family | AT5G63780 | 55.6 | 1.4e-96 | 350.1 | |
| Lsi03g01745 | . | 1 | 427 | C3H Transcription Factor Family | AT3G58030 | 51.9 | 6.8e-103 | 371.3 | |
| Lsi02g01811 | . | 36 | 345 | C3H Transcription Factor Family | AT4G26580 | 61.5 | 2.1e-112 | 402.5 | |
| Lsi01g01637 | . | 11 | 446 | C3H Transcription Factor Family | AT5G01960 | 66.4 | 1.4e-148 | 523.1 | |
| Lsi11g01333 | . | 69 | 210 | C3H Transcription Factor Family | AT2G04240 | 56.5 | 5.4e-37 | 151.0 | |
| Lsi10g01089 | . | 1 | 242 | C3H Transcription Factor Family | AT5G19430 | 51.8 | 1.3e-61 | 233.4 | |
| Lsi07g00769 | . | 130 | 585 | C3H Transcription Factor Family | AT5G45290 | 52.3 | 4.2e-102 | 369.0 | |
| Lsi10g01089 | . | 40 | 242 | C3H Transcription Factor Family | AT5G12310 | 56.4 | 1.5e-57 | 219.9 | |
| Lsi06g01233 | CCT | 138 | 430 | C3H Transcription Factor Family | AT5G05810 | 54.1 | 5.6e-75 | 278.5 | |
| Lsi03g00338 | . | 53 | 219 | C3H Transcription Factor Family | AT5G05830 | 64.7 | 3.7e-59 | 224.9 | |
| Lsi03g02162 | CCT,ECH | 70 | 231 | C3H Transcription Factor Family | AT5G05830 | 61.7 | 4.2e-55 | 211.5 | |
| Lsi01g01511 | CCT,ECH | 36 | 166 | C3H Transcription Factor Family | AT5G05830 | 58.8 | 6.5e-40 | 161.0 | |
| Lsi06g00828 | CCT | 70 | 457 | C3H Transcription Factor Family | AT4G28890 | 51.6 | 1.6e-96 | 350.1 | |
| Lsi03g00188 | . | 81 | 300 | C3H Transcription Factor Family | AT5G15790 | 59.7 | 7.3e-72 | 267.3 | |
| Lsi03g00367 | . | 40 | 311 | C3H Transcription Factor Family | AT3G55530 | 79.9 | 6.3e-115 | 410.6 | |
| Lsi02g02317 | . | 1 | 273 | C3H Transcription Factor Family | AT1G63900 | 76.3 | 3.1e-117 | 418.3 | |
| Lsi05g01907 | . | 10 | 393 | C3H Transcription Factor Family | AT2G44580 | 53.3 | 1.0e-118 | 423.7 | |
| Lsi08g01421 | . | 25 | 150 | C3H Transcription Factor Family | AT1G74990 | 59.1 | 5.7e-40 | 160.6 | |
| Lsi04g01367 | . | 404 | 677 | C3H Transcription Factor Family | AT5G20910 | 63.9 | 1.7e-95 | 346.3 | |
| Lsi03g00937 | . | 119 | 475 | C3H Transcription Factor Family | AT1G65040 | 57.4 | 3.5e-101 | 365.2 | |
| Lsi01g01051 | . | 17 | 227 | C3H Transcription Factor Family | AT2G23780 | 61.6 | 2.2e-73 | 272.3 | |
| Lsi08g01421 | . | 6 | 229 | C3H Transcription Factor Family | AT2G23780 | 56.5 | 8.2e-68 | 253.8 | |
| Lsi03g01619 | CCT | 1 | 317 | C3H Transcription Factor Family | AT3G10810 | 53.9 | 1.6e-79 | 293.9 | |
| Lsi01g01756 | CCT | 46 | 283 | C3H Transcription Factor Family | AT3G10810 | 60.7 | 1.0e-67 | 254.6 | |
| Lsi09g00235 | . | 1 | 170 | C3H Transcription Factor Family | AT1G63840 | 59.0 | 5.8e-47 | 184.1 | |
| Lsi09g01587 | . | 1 | 152 | C3H Transcription Factor Family | AT1G63840 | 50.9 | 4.1e-40 | 161.4 | |
| Lsi09g00690 | . | 17 | 353 | C3H Transcription Factor Family | AT1G68070 | 65.1 | 1.1e-119 | 426.8 | |
| Lsi07g01384 | . | 47 | 376 | C3H Transcription Factor Family | AT1G68070 | 50.5 | 1.7e-85 | 313.2 | |
| Lsi04g01830 | . | 4 | 182 | C3H Transcription Factor Family | AT1G76410 | 55.2 | 2.2e-50 | 195.7 | |
| Lsi07g01038 | . | 54 | 212 | C3H Transcription Factor Family | AT1G76410 | 55.7 | 8.0e-45 | 177.2 | |
| Lsi07g01038 | . | 54 | 203 | C3H Transcription Factor Family | AT2G17450 | 56.9 | 1.1e-38 | 156.8 | |
| Lsi11g00931 | . | 82 | 598 | C3H Transcription Factor Family | AT2G31510 | 72.6 | 2.1e-225 | 778.5 | |
| Lsi08g00360 | . | 86 | 512 | C3H Transcription Factor Family | AT2G31510 | 79.9 | 7.3e-215 | 743.4 | |
| Lsi01g01180 | . | 7 | 169 | C3H Transcription Factor Family | AT2G35910 | 61.2 | 5.5e-53 | 204.5 | |
| Lsi03g01806 | . | 15 | 161 | C3H Transcription Factor Family | AT2G35910 | 54.2 | 4.3e-42 | 168.3 | |
| Lsi05g00102 | . | 61 | 318 | C3H Transcription Factor Family | AT2G41980 | 81.0 | 8.6e-129 | 456.8 | |
| Lsi05g00103 | . | 564 | 821 | C3H Transcription Factor Family | AT2G41980 | 80.2 | 3.3e-128 | 454.9 | |
| Lsi10g00990 | . | 27 | 323 | C3H Transcription Factor Family | AT2G41980 | 71.9 | 2.1e-127 | 452.2 | |
| Lsi09g01813 | . | 43 | 301 | C3H Transcription Factor Family | AT2G41980 | 75.7 | 1.8e-123 | 439.1 | |
| Lsi09g00815 | . | 959 | 1240 | C3H Transcription Factor Family | AT2G41980 | 69.9 | 3.2e-115 | 411.8 | |
| Lsi04g00034 | . | 106 | 343 | C3H Transcription Factor Family | AT2G41980 | 78.6 | 9.2e-115 | 410.2 | |
| Lsi01g01940 | . | 50 | 236 | C3H Transcription Factor Family | AT2G41980 | 85.0 | 2.4e-94 | 342.4 | |
| Lsi05g01456 | . | 123 | 397 | C3H Transcription Factor Family | AT3G06140 | 62.7 | 7.3e-95 | 344.4 | |
| Lsi03g02030 | . | 33 | 329 | C3H Transcription Factor Family | AT3G09770 | 59.4 | 1.2e-86 | 317.0 | |
| Lsi05g00445 | . | 123 | 613 | C3H Transcription Factor Family | AT3G26730 | 52.9 | 3.5e-144 | 509.2 | |
| Lsi02g00365 | . | 342 | 633 | C3H Transcription Factor Family | AT3G47990 | 70.2 | 6.5e-121 | 430.6 | |
| Lsi04g01830 | . | 4 | 183 | C3H Transcription Factor Family | AT1G20823 | 55.6 | 3.9e-50 | 194.9 | |
| Lsi07g01038 | . | 54 | 235 | C3H Transcription Factor Family | AT1G20823 | 51.3 | 1.5e-46 | 183.0 | |
| Lsi10g00332 | . | 4 | 395 | C3H Transcription Factor Family | AT3G18930 | 53.8 | 3.2e-86 | 315.8 | |
| Lsi07g01081 | . | 20 | 235 | C3H Transcription Factor Family | AT5G66070 | 74.5 | 4.0e-75 | 278.1 | |
| Lsi03g02071 | . | 41 | 310 | C3H Transcription Factor Family | AT5G02750 | 53.4 | 3.0e-67 | 252.3 | |
| Lsi06g01347 | . | 5 | 406 | C3H Transcription Factor Family | AT1G73950 | 64.4 | 6.5e-146 | 514.2 | |
| Lsi09g00690 | . | 15 | 251 | C3H Transcription Factor Family | AT2G01735 | 60.4 | 1.3e-74 | 276.6 | |
| Lsi07g01384 | . | 60 | 269 | C3H Transcription Factor Family | AT2G01735 | 52.8 | 2.7e-51 | 199.1 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0000123 | 7 | 13 | 5 | 5 | 9 | 4 | 10 | 5 | 6 | 5 | 4 | 3 | 7 | 6 | 6 | 10 | 5 | 13 | 9 | 4 | 6 | 6 | 7 | 7 | 7 | 5 | 6 | 22 | 16 | 5 | 223 |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lsi09g00815 | Lsi_Chr09 | FPKM | 11.705772 | 14.652708 | 4.948206 | 4.933158 | 23.318697 | 21.156853 | 23.306314 | 4.936631 | 4.143259 | 4.237104 |