Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi09g01152 | ATGCCAAGTAATAGAAAATCGAACCATTTTGATGTTCTCACTAGTTGTACTATGGTTGGTCGTTCAGCCCAGAATGCGATCGACAAGCGTTCAGTTGTTTTGGCAGTTTACAATGTAACCGAGTTCTTGGAAGACCATCCTGGTGGCGACGAGGTGTTGTTGTCCGGCACTGGTAAGGATGCAACTGATGATTTTGAAGATGTGGGTCATAGTGAAAGTGCAAGAGAAATGATGAGCAAATACTACGTTGGAGAGATCGACATCTCGACGATCCCAGAACAGACGACATACACAACTCCAAAGCAGCCTCATTACAATCAGGATAAGACGACCGAGTTCATAATCAAGCTCCTCCAGTTCTTGGTTCCTCTCGCAATCTTGGGTTTGGCAGTCGGTATCCGCTTTTACACCAAATCAACCTGA | 423 | 45.15 | MPSNRKSNHFDVLTSCTMVGRSAQNAIDKRSVVLAVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPEQTTYTTPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRFYTKST | 140 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 18461940 | 18465693 | + | Lsi09G011520.1 | Lsi09g01152 | 670765 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi09g01152 | 140 | PRINTS | Cytochrome B5 signature | 46 | 60 | IPR001199 | - | |
Lsi09g01152 | 140 | PRINTS | Cytochrome B5 signature | 61 | 68 | IPR001199 | - | |
Lsi09g01152 | 140 | PRINTS | Cytochrome B5 signature | 74 | 86 | IPR001199 | - | |
Lsi09g01152 | 140 | PRINTS | Cytochrome B5 signature | 36 | 46 | IPR001199 | - | |
Lsi09g01152 | 140 | PANTHER | BNAC04G43300D PROTEIN | 34 | 138 | - | - | |
Lsi09g01152 | 140 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 35 | 86 | IPR001199 | - | |
Lsi09g01152 | 140 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 36 | 87 | IPR001199 | - | |
Lsi09g01152 | 140 | SMART | Cyt_b5_2 | 27 | 87 | IPR001199 | - | |
Lsi09g01152 | 140 | PANTHER | CYTOCHROME B5 | 34 | 138 | - | - | |
Lsi09g01152 | 140 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 42 | 49 | IPR018506 | GO:0020037 | |
Lsi09g01152 | 140 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 36 | 97 | IPR036400 | - | |
Lsi09g01152 | 140 | Gene3D | - | 11 | 89 | IPR036400 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi09g00003 | Lsi-Chr9:27466 | Lsi09g01152 | Lsi-Chr9:18461940 | 1.07E-50 | dispersed | |
Lsi09g01152 | Lsi-Chr9:18461940 | Lsi09g01656 | Lsi-Chr9:24931374 | 3.66E-20 | dispersed | |
Lsi05g01833 | Lsi-Chr5:25617233 | Lsi09g01152 | Lsi-Chr9:18461940 | 3.59E-63 | wgd | |
Lsi05g01118 | Lsi-Chr5:18960560 | Lsi09g01152 | Lsi-Chr9:18461940 | 1.04E-53 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi09g01152 | K23490 | - | csv:101213506 | 201.83 |