Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi09g01200 | ATGGCCGGTGAGGTAGCGGTGGAGGGTGCTGCGGCGGCAGCGGCGGCGGCGATAGAAGTAGCCGATTCCAATCAGCAGTACCATAAATTGGAGAGAAAATGGACCTTTTGGTTTGATAACCAGTCCAGGCCGAAGCAAGGTGCTGCTTGGGGCACTTCTCTACGCAAGGTCTATACCTTTGACACCGTCGAAGAATTTTGGTGTTTGTACGATCAGTTATTCAAGCCGAGTAAGTTGCCGGCTAATGCAGATTTTCACCTGTTCAAATCTGGAGTTGAACCGAAATGGGAAGATCCTGAGTGCGCTAATGGAGGAAAATGGACTGTCACGAGCAGTAGAAAGGCTAACCTCGATAACATGTGGCTGGAAACGTTGATGGCTTTGATTGGGGAGCAATTTGAGGAGTCTGATGAGATCTGTGGCGTAGTTGCCAGTGTGCGCCAGAGGCAGGACAAACTTGCCCTCTGGACCAAGACAGCAACAAATGAGGCTGCTCAGATGAGCATTGGTAGGAAATGGAAGGAAATTATCGACGTGACCGACAAGATTTCCTTCAGCTTTCATGAGGATTTGAGAAGGGAAAAGTCAGCAAAAGCTCGATACAGTGTTTGA | 612 | 49.02 | MAGEVAVEGAAAAAAAAIEVADSNQQYHKLERKWTFWFDNQSRPKQGAAWGTSLRKVYTFDTVEEFWCLYDQLFKPSKLPANADFHLFKSGVEPKWEDPECANGGKWTVTSSRKANLDNMWLETLMALIGEQFEESDEICGVVASVRQRQDKLALWTKTATNEAAQMSIGRKWKEIIDVTDKISFSFHEDLRREKSAKARYSV | 203 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 19231830 | 19234877 | + | Lsi09G012000.1 | Lsi09g01200 | 670813 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi09g01200 | 203 | Coils | Coil | 13 | 33 | - | - | |
Lsi09g01200 | 203 | PANTHER | BNAA08G29940D PROTEIN | 1 | 195 | - | - | |
Lsi09g01200 | 203 | Pfam | Eukaryotic initiation factor 4E | 29 | 185 | IPR001040 | GO:0003723|GO:0003743|GO:0006413 | |
Lsi09g01200 | 203 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED | 1 | 195 | IPR001040 | GO:0003723|GO:0003743|GO:0006413 | |
Lsi09g01200 | 203 | Gene3D | RNA Cap, Translation Initiation Factor Eif4e | 19 | 203 | IPR023398 | - | |
Lsi09g01200 | 203 | ProSitePatterns | Eukaryotic initiation factor 4E signature. | 84 | 107 | IPR019770 | GO:0003723|GO:0003743|GO:0005737|GO:0006413 | |
Lsi09g01200 | 203 | SUPERFAMILY | eIF4e-like | 23 | 196 | IPR023398 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi02g00851 | Lsi-Chr2:7981656 | Lsi09g01200 | Lsi-Chr9:19231830 | 2.28E-67 | dispersed | |
Lsi03g01306 | Lsi-Chr3:23884420 | Lsi09g01200 | Lsi-Chr9:19231830 | 1.86E-30 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi09g01200 | K03259 | - | csv:101208495 | 385.571 |