Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi09g01386 ATGAGAGCTTCAATTCATGGCTTCCCCCTCTTCTCTGTACTGGTTTTCAGTACTCTTCTTGCTCTTCAGGTTGTCAATGGAGCTTTGATCAATAATTTCTATAGGAGAAGCTGCCCCCAAGCTGAGAGAATCGTTCAAGACGTCACCTTTCGTCTCGTCCGATCGAATCCCCGTCTCGGCGCTCAGCTCCTCAGAGTTCAATTCCACGACTGTTTCGTTCGGGGATGTGATGCATCAGTTCTGTTAGATACTGTTGGAACAAACCAATCAGAGAAGGATGCAAGGCCAAACCTATCCCTATTAGGGTTTGATGCCATTGACCAAATCAAGTTCGAGGTTGAGAAAGCTTGTAGTGGAGTCGTTTCCTGTGCTGATATTCTTGCTCTTGCTGCACGCGACGCTGTTTCCTTTCCATTAAAAAATCGGCCTCTCTGGCCAGTCTTAACCGGAAGAAGAGACGGAACGATTTCACGATTATCAGACGTTACTGGTAATATCCCGTCGCCGTTCTCCGATTTCGCCACTCTTAAGCAACTCTTCGAGAAGAAAGGCCTAACCGTGAACGATCTAGTGATTTTATCAGGTGGTCACACAATTGGAGTAGCTCATTGTGGCACTTTCTCAAGGAGGCTTTATAACTTCACTGGCCAAGGAGATGCAGATCCTTCATTAGATCCAAAATATGCAGATTTCCTTAGAACAAAATGTCCAAATCCAGCTAACTCTAACATTACAGTTGAAATGGATCCAAGGAGTTCTCGATCATTTGACAGTAACTATTTCAAAATTCTCACACAAAAGAAGGGTTTGTTTCAATCCGACGCCGCGCTTCTCACCGACGTTTCGTCGTCTCGAATCGTCAAACAGTTGCAGAATCCAAGGGCTTTCTCTTCTAGCTTTGCTAATTCCATGTTGAAGATGGCAGCTATTGAAGTCCTCACTGGACCTAATAATGGTGAAATTAGGAAACGATGTCGTTTTGTTAATTAA 990 44.24 MRASIHGFPLFSVLVFSTLLALQVVNGALINNFYRRSCPQAERIVQDVTFRLVRSNPRLGAQLLRVQFHDCFVRGCDASVLLDTVGTNQSEKDARPNLSLLGFDAIDQIKFEVEKACSGVVSCADILALAARDAVSFPLKNRPLWPVLTGRRDGTISRLSDVTGNIPSPFSDFATLKQLFEKKGLTVNDLVILSGGHTIGVAHCGTFSRRLYNFTGQGDADPSLDPKYADFLRTKCPNPANSNITVEMDPRSSRSFDSNYFKILTQKKGLFQSDAALLTDVSSSRIVKQLQNPRAFSSSFANSMLKMAAIEVLTGPNNGEIRKRCRFVN 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 21880522 21883549 - Lsi09G013860.1 Lsi09g01386 670999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi09g01386 329 Gene3D Peroxidase, domain 2 167 307 - -
Lsi09g01386 329 Gene3D - 32 329 - -
Lsi09g01386 329 PANTHER PEROXIDASE 11 328 - -
Lsi09g01386 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Lsi09g01386 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi09g01386 329 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi09g01386 329 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi09g01386 329 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi09g01386 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi09g01386 329 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi09g01386 329 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi09g01386 329 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi09g01386 329 Pfam Peroxidase 47 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lsi09g01386 329 ProSiteProfiles Plant heme peroxidase family profile. 28 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lsi09g01386 329 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Lsi09g01386 329 PANTHER PEROXIDASE 25-RELATED 11 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi09g01386 329 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lsi09g01386 329 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lsi09g01386 329 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lsi09g01386 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lsi09g01386 329 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lsi09g01386 329 SUPERFAMILY Heme-dependent peroxidases 30 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lsi09g01386 329 CDD secretory_peroxidase 32 328 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi04g00579 Lsi-Chr4:5295693 Lsi09g01386 Lsi-Chr9:21880522 8.82E-80 dispersed
Lsi09g01386 Lsi-Chr9:21880522 Lsi10g00150 Lsi-Chr10:2437499 4.79E-106 dispersed
Lsi09g01386 Lsi-Chr9:21880522 Lsi11g01469 Lsi-Chr11:23252468 1.30E-103 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi09g01386 K00430 - csv:101215642 567.385