Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lsi09g01503 | ATGGCGTCATCTGTTCTTTCGAATTCCGATCGCGCGCGGGAGTCTTCAAGGAAGCAAAAGAAGAAGAAAAGCCATGGCAACAGAGATCATCATCAAAACCAGAATCATATTAAATGGAAATCTCAAGCCCAGCAGGAAATTTACTCGTCCAAGCTGGTACGAGCATTGAACCAAGTGAGACTCAGTCCTTCGAATGAGGCGCCGCCGCGCCGCGGCAGAGCTGTACGCGAGGCTGCCGATAGAGTCCTCGCAGTTGCCGCCAAGGGGAGAACCAGGTGGAGTCGAGCCATATTAACGAACAGGTTGAAGCTCAAGTTCAGGAAGCCGAAGAGACAGAGATCAGCATCCACCGCTGGAAATAACCGCTCAAAGAAACCCAGAGTCACCGTATTGCGGTTGAGAGGGAAATCCTTACCGGCGGTACAAAGGAAAGTAAGGTTTCTTGGACGGCTAGTTCCCGGTTGCCGGAAAGAACCGCTGCCGGTTATTCTGGAAGAAGCTACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCCATGAGTGCCCTTGCTGAGTTGCTCTCGGGCTCAACTTCTGCTGCAGGCTCTGGTTCGACCCCTCCAAGCTGA | 612 | 52.12 | MASSVLSNSDRARESSRKQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGNNRSKKPRVTVLRLRGKSLPAVQRKVRFLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSGSTSAAGSGSTPPS | 203 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 23057029 | 23057640 | + | Lsi09G015030.1 | Lsi09g01503 | 671116 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lsi09g01503 | 203 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 15 | 201 | IPR044660 | GO:0006355 | |
| Lsi09g01503 | 203 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
| Lsi09g01503 | 203 | MobiDBLite | consensus disorder prediction | 106 | 126 | - | - | |
| Lsi09g01503 | 203 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 145 | 191 | IPR036638 | GO:0046983 | |
| Lsi09g01503 | 203 | PANTHER | TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 | 15 | 201 | - | - | |
| Lsi09g01503 | 203 | CDD | bHLH_AtIBH1_like | 130 | 185 | IPR044549 | GO:0006355 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lsi06g00052 | Lsi-Chr6:402447 | Lsi09g01503 | Lsi-Chr9:23057029 | 2.74E-54 | dispersed | |
| Lsi05g01413 | Lsi-Chr5:22100118 | Lsi09g01503 | Lsi-Chr9:23057029 | 1.41E-78 | transposed | |
| Lsi08g00317 | Lsi-Chr8:8328002 | Lsi09g01503 | Lsi-Chr9:23057029 | 5.73E-07 | transposed | |
| Lsi11g00644 | Lsi-Chr11:6794007 | Lsi09g01503 | Lsi-Chr9:23057029 | 1.04E-43 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lsi09g01503 | - | - | csv:101220618 | 319.316 |