Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi09g01574 ATGTCTAAAGAAGAAGGCCCACAAGCTAACAGAAGGACAACCCGGTCCTCTTCAGTGGCTGTTCTAAGGGCTTCTGGTGAAATAAAGAAGAAATGTGATCCACATATTCCAACTCTTAAAGATCTTGTTTTTGGAGAAGATACCATCAGTAAAGAAGATCTCCTGTCTAGTTTTCCTGGACGTCATACTCAAATTCTTGAACTCCTTAACCTCTTAGGTCCCCTGAATTCTCCCATGCTTCCCCTCTTTGTTTATGGTGGCACGTCATCGGGAAAAACCAGTGTCATTCTACAAATATTTCGTCATCTCAACCGTCCTTTTGTCTACTCAAGCTGTCGTACTTGTTATAGTTTGCGAACTCTATTTGAGTCTATTTTGAATCAGTTATTACTTCATCAAAAAGATGCAGACAATGGATATTTGAGTGCAAAACGATGTGAAAAACCATCAGATTTTGTTAACTTTCTTCGTGAAGCCTTAGTTAAAGTTGTAAAAACTCTCCAGGGGAACCCAGGAAAGTTAGGCACCAAGAAGTTGACAGGACAAGGGCATGGACATATGATCTACCTGATTTTTGACAACTTGGAACTTGTTAGAGACTGGGACAAGAGTTCAAGCATATTGCCTTTTCTGTTTAATCTCCATGAAGTTTTAAACATGAATGAGGTTGGATTTCTCTTCATCAGTAATACTTCTCCTGACACATACTATTCAAATATGGGTTACTTGGAGCCCATCCCTGTTTATTTCTCTGAGTACACAGAAGATGATCTTCGTAAAATTTTTATGAGGAATCAAACCAATCAAGAGATGTATTCTTCCTTTCTGAGTGTTGTATTGGGGCCATTCTATAGAATTACTAGACAAGTGAATGAGCTATCCATAACGTTTTCATCATTGTATAAAACATACTGTGAAGCTTCAGATGATCTGAACAATGTTCCCAATGAGTCCAGCAAGAGGACACGTTTCAGTCATTTTCAGCCACATATTGCCCCTGCTTTGAATCAGATATTTAAAATTTCATCTCTGCCTTCTGAGGTTAATAATTTGAAGGAAGCAAAGAGAAAAGGTGGTAGTAAGAAGTTTGGTGGGGGCGACTCTTCTGAGCACTTGGATTTTCACATGTCTACTTCTGCAAAATATCTTCTTCTTTCAGCCTTCCTTGCTTCAAGAAACCCAGCTACACTTGATGCATCACTGTTTGATTCAACTGGGGGCTCTAGTAGTCGAAAAAAGAAGAAGAGGCCATCTGAAAAATCAATCGAGCAGAAGGAAATTTCAGAACAGGAGTTGCTTATGAAAGGACCTGGAACTTTTCCGTTGGAGAGATTGCTTGCAATATTTCAGTGCATTACGTCTGTCGCAGAAATCTCACTTGAAGATGAGCAAGGAAATGTTTTAATGGAAAGTCAAAATGAGGATAGTGAACTCATGTCTGATGTTCTCCTGCAACTTTCCAGCCTCTGCAATGCAAATTTTGTGGTTAAAGGAGGAAGTTGCCCACTAGAAGGTTCAACTCGATATCGCTCTACAGTGTCTGAAGATATGGCTTTGAAGGTGGCAAGGAGTATTAAGTTCCCCCTGTCCAAGTACATGTACAGAAGATAA 1611 39.6 MSKEEGPQANRRTTRSSSVAVLRASGEIKKKCDPHIPTLKDLVFGEDTISKEDLLSSFPGRHTQILELLNLLGPLNSPMLPLFVYGGTSSGKTSVILQIFRHLNRPFVYSSCRTCYSLRTLFESILNQLLLHQKDADNGYLSAKRCEKPSDFVNFLREALVKVVKTLQGNPGKLGTKKLTGQGHGHMIYLIFDNLELVRDWDKSSSILPFLFNLHEVLNMNEVGFLFISNTSPDTYYSNMGYLEPIPVYFSEYTEDDLRKIFMRNQTNQEMYSSFLSVVLGPFYRITRQVNELSITFSSLYKTYCEASDDLNNVPNESSKRTRFSHFQPHIAPALNQIFKISSLPSEVNNLKEAKRKGGSKKFGGGDSSEHLDFHMSTSAKYLLLSAFLASRNPATLDASLFDSTGGSSSRKKKKRPSEKSIEQKEISEQELLMKGPGTFPLERLLAIFQCITSVAEISLEDEQGNVLMESQNEDSELMSDVLLQLSSLCNANFVVKGGSCPLEGSTRYRSTVSEDMALKVARSIKFPLSKYMYRR 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 23872411 23878473 - Lsi09G015740.1 Lsi09g01574 671187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi09g01574 536 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 248 533 IPR020796 GO:0000808|GO:0005634|GO:0006260
Lsi09g01574 536 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 265 IPR027417 -
Lsi09g01574 536 MobiDBLite consensus disorder prediction 400 428 - -
Lsi09g01574 536 Gene3D - 58 238 IPR027417 -
Lsi09g01574 536 Pfam AAA ATPase domain 58 217 IPR041664 -
Lsi09g01574 536 MobiDBLite consensus disorder prediction 408 428 - -
Lsi09g01574 536 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 51 535 IPR020796 GO:0000808|GO:0005634|GO:0006260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi09g01574 K02607 - csv:101223023 938.332