Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi09g01657 | ATGTCGTTGAGTAGCGAAATTGAAAGCCTGTGGGTTTTTGCTTTGGCTTCGAAATGCTCATCTCTGACCAAAGAAAACATCCTTTGCTCTGTATTTCTTCTTCTCTTAATTTGGGTTCTACTTTCCATTTTCTATTGGGCCCATCCTGGCGGCCCAGCTTGGGGCCGCCGCCACCGCCGCCGCAATTCCTCCTCCGCCACTATCCCTGGGCCAAGAGGCCTCCCCGTCATCGGCAGTATGAGGTTGATGACGGGTTTGGCCCACCAAAAAATAGCTGCTATGGCCAAATCCCTAGGAGCTACTCGTCTGATGGCTTTCTCACTCGCCAACACTCGCGTGATTGTCACATGCCACCCAGACATAGCCAAAGACATCCTAAACAGTTCCGTCTTTGCTGACCGTCCGATCAAAGAATCAGCTTACTCTTTGATGTTCAATCGTGCCATTGGATTTGCTCCTTATGGACTTTATTGGCGAACCCTCCGACGAATTGCTTCACACCATCTCTTCTGCCCAAAACAAATCAAATCCTCCGAGTCACAACGCCGTCAAATCGCTTCCCAAATGGTCAAAATCTTGTCATCCACTGCCGCCACGTCATCCTCTCTTCACATTCGTCAAACTCTTAAAACCGCCTCTTTGAATAGCATGATGGGTTCGGTTTTCGGCCGGTTTTACAATCTCTCCGACTCCAATCCTGAAGTTCAACTCCTCCAAAGCCTTGTCGATGAAGGCTACGATTTATTAGGCCTTCTCAACTGGTCCGACCATCTTCCCTTTTTGGCTGATTTCGACCCACAAAAAATCCGGTTCAGATGCTCCCGGTTGGTCCCGCAAGTGAACCGCTTCGTAACCCGGATCATCAACCAACACCGCGAAAAATCAGACCAAGAAATCATGGATTTCGTCGATGTTCTTCTCTCTCTTCAACAAAACGACAACCTCTCTGACTCCGATATCATCTCCGTTCTTTGGGAAATGATATTTAGAGGAACGGACACCGTGGCGGTTTTGATCGAGTGGATTCTAGCGAGGATGGTGGTTCATAAGGACGAGCAAGAAAAGGTACAAGAAGAATTAGATAAAGTGGTTGGAAGATCACGTGCCGTCATGGAATCCGACATTCCGTCGTTGGTTTATTTAACGGCGGTGGTTAAAGAAGTTCTAAGGTTGCATCCACCCGGCCCACTTCTGTCTTGGGCTCGTATTGCTATTACTGATACAATCGTCGATGGTCATCACGTGCCTCGTGGGACCACTGCGATGGTTAACATGTGGTCGATAGCGCGGGACCCACAGATCTGGTCGGACCCACTTGAATTTATGCCTGAGAGGTTTGTGTCCGCTGGTGCTGATGTGGAGTTTTCGATTATGGGTTCGGATCTCCGACTCGCTCCATTCGGGTCGGGTCGAAGGACTTGTCCTGGAAAGGCACTTGCTTGGACAACTGTCACTTTTTGGGTGGCTACACTATTACATGAGTTTAAATGGTTGCCTTCTCCTGATCAAAACGACGTCGTCGACTTCTCTGAGGTTCTTAAGCTCTCTTGTGAGATGGCTAATCCACTCACAGTTACACTATGCCCAAGGCGTATTTAA | 1599 | 48.66 | MSLSSEIESLWVFALASKCSSLTKENILCSVFLLLLIWVLLSIFYWAHPGGPAWGRRHRRRNSSSATIPGPRGLPVIGSMRLMTGLAHQKIAAMAKSLGATRLMAFSLANTRVIVTCHPDIAKDILNSSVFADRPIKESAYSLMFNRAIGFAPYGLYWRTLRRIASHHLFCPKQIKSSESQRRQIASQMVKILSSTAATSSSLHIRQTLKTASLNSMMGSVFGRFYNLSDSNPEVQLLQSLVDEGYDLLGLLNWSDHLPFLADFDPQKIRFRCSRLVPQVNRFVTRIINQHREKSDQEIMDFVDVLLSLQQNDNLSDSDIISVLWEMIFRGTDTVAVLIEWILARMVVHKDEQEKVQEELDKVVGRSRAVMESDIPSLVYLTAVVKEVLRLHPPGPLLSWARIAITDTIVDGHHVPRGTTAMVNMWSIARDPQIWSDPLEFMPERFVSAGADVEFSIMGSDLRLAPFGSGRRTCPGKALAWTTVTFWVATLLHEFKWLPSPDQNDVVDFSEVLKLSCEMANPLTVTLCPRRI | 532 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 24994503 | 24996477 | + | Lsi09G016570.1 | Lsi09g01657 | 671270 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi09g01657 | 532 | Gene3D | Cytochrome P450 | 54 | 526 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01657 | 532 | SUPERFAMILY | Cytochrome P450 | 68 | 530 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01657 | 532 | PRINTS | E-class P450 group I signature | 474 | 497 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01657 | 532 | PRINTS | E-class P450 group I signature | 319 | 336 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01657 | 532 | PRINTS | E-class P450 group I signature | 424 | 448 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01657 | 532 | PRINTS | E-class P450 group I signature | 212 | 230 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01657 | 532 | PRINTS | E-class P450 group I signature | 339 | 365 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01657 | 532 | PRINTS | E-class P450 group I signature | 382 | 400 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01657 | 532 | PRINTS | E-class P450 group I signature | 464 | 474 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01657 | 532 | PANTHER | CYTOCHROME P450 78A7-RELATED | 4 | 531 | - | - | |
Lsi09g01657 | 532 | PANTHER | CYTOCHROME P450 78A6 | 4 | 531 | - | - | |
Lsi09g01657 | 532 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 467 | 476 | IPR017972 | GO:0005506|GO:0016705 | |
Lsi09g01657 | 532 | Pfam | Cytochrome P450 | 69 | 505 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01657 | 532 | PRINTS | P450 superfamily signature | 465 | 474 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01657 | 532 | PRINTS | P450 superfamily signature | 474 | 485 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01657 | 532 | PRINTS | P450 superfamily signature | 330 | 347 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01657 | 532 | PRINTS | P450 superfamily signature | 383 | 394 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi02g00131 | Lsi-Chr2:1069273 | Lsi09g01657 | Lsi-Chr9:24994503 | 6.66E-169 | dispersed | |
Lsi04g00679 | Lsi-Chr4:6214116 | Lsi09g01657 | Lsi-Chr9:24994503 | 2.80E-143 | dispersed | |
Lsi09g01657 | Lsi-Chr9:24994503 | Lsi10g00681 | Lsi-Chr10:9538744 | 9.14E-156 | dispersed | |
Lsi09g01657 | Lsi-Chr9:24994503 | Lsi08g00903 | Lsi-Chr8:17391370 | 2.32E-180 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi09g01657 | K20619 | - | csv:101216159 | 920.998 |