Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi09g01731 ATGGAACCCTATCGTTCTCAGAGAAAATCCTCCATCACAACCATTTCCACTACCAATCTTCCCCTCTACCGCTCTGCTCCTCCTCTTGAAGTCAGGCTTGAAGATTTCGAGCTTTATGCCATAGATCGTCTTCGAGTTCTTAAGGGGATTTCTGATGGGTTATCTCGAGGAAAGAAATCTGAAGAAATGGAGAAACTGGTTAGAGAACTGTGGAAAACCAATATGAAACATCCGCAGGCATCTGAGGTTGTGAACAAGGATATAATCTCTCACTTTGTTCTGCGCCTTGTATACTGCAGAACGGAGGACTTGAGAAAATGGTTTCTTTCTATGGAAACTATGCTTTTCCGACACCGTTTTCTTTCTGAAAGTCCTGAATCTCAGAAGCAGGTCTTTGCGGAGCTTGGTCTCTCATACAAAGCAATCAGTTATGCAGAATTTGAGGCCGCGAAGGACAAATTGGTTCAAGTTGCTCGGTTGATTGGTCAGCCTGTACCAAGCAGTGATGCTATATACTATAAGGTACCATGGGAAGAAGTTCCAGAGCTTGTGGCTGGTCGAAGAGTATTTCTTCATAAAGGATATGCATATATTGCTATTTATCAGATAGTAGAAGCCCTTTGCACGAGCTACCTGGGTCCTGACTACTCTCAGCCAAGAGAGTATGCTGATATATCAATCAAAGACCTTGACCAAATAGCTAAAAGTTCATTTCCTCTTTGCATGCGACACCTATTTGAAAAGCTGAAAGAAGATCATCATTTGAAGCATGGAGGGAGGATGCAATTAGGTCTCTTTCTCAAGGGTGTTGGTTTGAAGCTTGATGATGCCCTGGCTTTCTGGAAAGCTGAGTTCTCCCAGAGAGTTGGTGCTGAGAGGTTTGACAAAGAATATGCATACAGTATCAGGCATAATTATGGAAAAGAAGGCAAGAGAGTGGATTATTCGCCTTATTCCTGTCAAAAAATAATCTCATCGTCACCTAGTGTTGGAGATCATCATGGATGTCCCTATAGACATTTCAGTGAAGACAACTTAAGAGCAGCTCTTGGTAAAATGGGAGTAAGTAACCGGACAATGGATGATATAATGGACAAAGTGCGAAATAAACATTATCAGTTGGCATGCACCTTGACATTTGAATCGATCCATGGCTCGTCATGTGATGCTGGGATTAATCATCCAAACCAGTACTTCATTGATAGTCAAAAGGTCCTGCAATCTAAGGCTGACTGCATGATGATGCATTCTGAACTCATGGCTGCTGCCCTACTATGA 1278 42.41 MEPYRSQRKSSITTISTTNLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKSEEMEKLVRELWKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRFLSESPESQKQVFAELGLSYKAISYAEFEAAKDKLVQVARLIGQPVPSSDAIYYKVPWEEVPELVAGRRVFLHKGYAYIAIYQIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQLGLFLKGVGLKLDDALAFWKAEFSQRVGAERFDKEYAYSIRHNYGKEGKRVDYSPYSCQKIISSSPSVGDHHGCPYRHFSEDNLRAALGKMGVSNRTMDDIMDKVRNKHYQLACTLTFESIHGSSCDAGINHPNQYFIDSQKVLQSKADCMMMHSELMAAALL 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 25954803 25963435 - Lsi09G017310.1 Lsi09g01731 671344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi09g01731 425 Gene3D - 2 212 - -
Lsi09g01731 425 Pfam Eukaryotic and archaeal DNA primase, large subunit 203 399 IPR007238 GO:0006269
Lsi09g01731 425 CDD PriL_PriS_Eukaryotic 22 402 IPR016558 -
Lsi09g01731 425 PANTHER DNA PRIMASE LARGE SUBUNIT 202 411 - -
Lsi09g01731 425 PANTHER DNA PRIMASE LARGE SUBUNIT 1 204 - -
Lsi09g01731 425 PANTHER DNA PRIMASE LARGE SUBUNIT 202 411 IPR007238 GO:0006269
Lsi09g01731 425 PIRSF DNA_primase_large 199 418 IPR016558 -
Lsi09g01731 425 PIRSF DNA_primase_large 2 213 IPR016558 -
Lsi09g01731 425 PANTHER DNA PRIMASE LARGE SUBUNIT 1 204 IPR007238 GO:0006269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi09g01731 K02685 - csv:101217274 773.467