Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi09g01787 | ATGATGGATGGTTGGTTAACAGCTCTCATTGCCCTTTCCATTTGTGCAATCTTTCACTTAGTTTTGAGCTATATCTTGAATCGCAAGCAAAATCTCCCTCCTGGTCCTCTTGCTTTACCTCTTATAGGCAATCCCATATGGGTTTTCAAGCCTCTCTCTCAACTTGAAACCATCCTCCGCCATTACCATTCCAAATATGGCCCTGTTGTAACCCTTTACTTTGGTAACACTCCTTCCATTTTCATAGCTAGCCACTCTGTTTCTCATCATGCTTTGGTTCAAAACGGCGCCGTCTTCGCCGACCGTTTCCCCGTCATGGAAACTGCCAAAATCATCACTAGTAACCAACATAATATCAGCACTGCCTTCTACGGTCCAACATGGCGCATCCTCCGCCGTAACCTCACCTCCGAGCTCCTCCATCCGTCTCGGTTGAAAGCTCATTCGCTTTCTCGTAAATGGGTGTTGGATGTTCTTGTTCATCGTCTCCATCAAGCACCTGGTCCTGTAAAGCTCATTGACCATCTTCGTTATGCTATGTTTTGTTTAGCTACAACTATGTGTTTTGGGGAGAGATTTGATGAGAAATTGATTCATGAAATACAAGAATCTCAACGTGGGGTGTTGTTGAATATCAGTAAGTTCAATGATCTTAATTTTTGGCCTCCTAGATTGGGGAAGTTCTTGTTCAAGAAACGTTGGGACGAGATTCGTCAACTACGTAAACGACAAGATGATATATTATTACCTTTGATTAATAATGCAAGAAAAAACAGAACAACAACAATCAAAGATCAAGAAGCTGCAGGGAAGCCAATCCCTTATGTTGATACTCTGTTTGATTTGGAAATTGCTGACAACAATGATGAGAAGGTAAAGAGGAAATTAGTAGATGATGAACTCATAACATTATGCTCTGAGTTTATCGACGCCATTACCGATACAACGACCGCATCGTTGCAATGGATAATGGCGAATGTAGTGAAGTACACAGAAGTTCAAGAGAAAGTGTACAATGAGATAAAAGAAGTGATGGGAAATAAGAAAGATGAAGAGATAGAAGAGGAGGATTTGGGGAAGATGATATATTTGAAAGCAGTAGTAATGGAAGGACTACGGCGACATCCCCCGGGGCATTTGTTGTTGCCTCATAAAGTGATGGAGGAGAGTGTTTTGGAAGGAGGATACAAGGTGCCAAAAGGAACATCAGTGAACTTTATGGTAGCAGATATGGGTTGGGACGCGAACGTATGGCCGGAACCGATGGCGTTTAAGCCGGAGAGATTCTTGAATGATAGGTCAGAGGGAGGGGTTGAGTTGGAAGTTGATATCACAGGGAGTAAGGAAATAAAGATGATGCCATTTGGGGCTGGGAGGAGGATATGCCCAGGATATGCATTGGGGTTATTGCATTTGGAGTATTTTGTTGGGAATTTGGTGTGGAATTTCAAGTGGAAGGCTGCTGGGGAAGTTGATTTGTCTGAGAAACAAGAATCTGCTGTCAATATGAAACATTCCTTGCTTGCTTACTTGTCTCCAAGGGCTGTTTCTTAG | 1554 | 42.66 | MMDGWLTALIALSICAIFHLVLSYILNRKQNLPPGPLALPLIGNPIWVFKPLSQLETILRHYHSKYGPVVTLYFGNTPSIFIASHSVSHHALVQNGAVFADRFPVMETAKIITSNQHNISTAFYGPTWRILRRNLTSELLHPSRLKAHSLSRKWVLDVLVHRLHQAPGPVKLIDHLRYAMFCLATTMCFGERFDEKLIHEIQESQRGVLLNISKFNDLNFWPPRLGKFLFKKRWDEIRQLRKRQDDILLPLINNARKNRTTTIKDQEAAGKPIPYVDTLFDLEIADNNDEKVKRKLVDDELITLCSEFIDAITDTTTASLQWIMANVVKYTEVQEKVYNEIKEVMGNKKDEEIEEEDLGKMIYLKAVVMEGLRRHPPGHLLLPHKVMEESVLEGGYKVPKGTSVNFMVADMGWDANVWPEPMAFKPERFLNDRSEGGVELEVDITGSKEIKMMPFGAGRRICPGYALGLLHLEYFVGNLVWNFKWKAAGEVDLSEKQESAVNMKHSLLAYLSPRAVS | 517 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 26611497 | 26613050 | - | Lsi09G017870.1 | Lsi09g01787 | 671400 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi09g01787 | 517 | Pfam | Cytochrome P450 | 33 | 499 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01787 | 517 | PRINTS | E-class P450 group I signature | 87 | 108 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01787 | 517 | PRINTS | E-class P450 group I signature | 300 | 317 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01787 | 517 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01787 | 517 | PRINTS | E-class P450 group I signature | 407 | 431 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01787 | 517 | PRINTS | E-class P450 group I signature | 63 | 82 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01787 | 517 | PRINTS | E-class P450 group I signature | 179 | 197 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01787 | 517 | PRINTS | E-class P450 group I signature | 452 | 462 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01787 | 517 | PRINTS | E-class P450 group I signature | 462 | 485 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01787 | 517 | PRINTS | E-class P450 group I signature | 320 | 346 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01787 | 517 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 455 | 464 | IPR017972 | GO:0005506|GO:0016705 | |
Lsi09g01787 | 517 | PANTHER | CYTOCHROME P450 | 5 | 513 | - | - | |
Lsi09g01787 | 517 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 5 | 513 | - | - | |
Lsi09g01787 | 517 | PRINTS | P450 superfamily signature | 453 | 462 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01787 | 517 | PRINTS | P450 superfamily signature | 311 | 328 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01787 | 517 | PRINTS | P450 superfamily signature | 462 | 473 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01787 | 517 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01787 | 517 | SUPERFAMILY | Cytochrome P450 | 31 | 514 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi09g01787 | 517 | Gene3D | Cytochrome P450 | 25 | 516 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi09g01787 | Lsi-Chr9:26611497 | Lsi10g00246 | Lsi-Chr10:4084478 | 0 | dispersed | |
Lsi09g01787 | Lsi-Chr9:26611497 | Lsi08g00659 | Lsi-Chr8:14933121 | 2.43E-97 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi09g01787 | K24184 | - | csv:101204774 | 871.692 |