Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi09g01869 ATGTACACGGCGGTGCTCGCGGCGGTGCTTGCGGTGGCCGTCTGGGTTTTGAAGAATGCGAACCAGTGGGTCTACGAAACCGCTCGGTTGGGTTCGAAACGGTTTGCCCTACCGCCCGGGGATCTGGGCTGGCCGTTCATTGGCAATATGTGGTCTTTTCTAAGAGCTTTCAAGTCCCCTTATCCTGATTCTTTCATGGACTCATTCCTCTCCAGGTATGGAAATACAGGAATTTACAAAGCCTTCATGTTTGGAAGTCCAAGTGTGATTGTAACTTCAGCAGAAGCATGTAAAAGAGTTTTGAATGATGATGAAGCTTTTGGGTCAGGATGGCCTCCTTCCACCATGAAACTCATTGGAGAAAACTCCTTCATTGGCATTTCATACCAAGAACACAAGCGGCTCCGCCGCATAACCGCCGCTCCGGTCAACGGTTACGACGCGTTGGCCACTTACCTTACTTACATAGAAAAGATAGTGGTTTCTTCCTTGGAGAAATGGGCTTCCATGGGAGAAATAGAGTTCTTAACACAGCTTAGAAAGCTTACCTTCAAGATCATTATGTACATATTTCTTAGCTCTGAAAGTGAGGCAATAATGGAGGCTTTGGAGAGAGAGTACACAGAGCTTAATCATGGAGTCAGAGCTATGGCCATCAATATTCCTGGTTTTGCTTACCATAAAGCACTCAAGGCACGGAGAAATCTCGTGGCAACATTTGAATCAATTGTGAGGGGGAGAAGGAAGGAAAGAGAGAGGAAGAATAAATTGAGAAGAAAGAGAAGAGATATGATGGATGCTTTGCTAGATGCAGAAGATGAAGATGGAAGAAGATTGAGTGATGAAGAAATAATTGATGTTTTGATAATGTACTTGAATGCAGGCCATGAATCTTCGGGTCATACTATGATGTGGGCAGCCATTTTCTTACAACAACATCCTCAATTTCTTCAAAAGGCCAAGGTAGTGATCGATGAAACACTACGAGTGGTAACATTCTCACTCACCGTCTTTCGAGAGGCAAAACATGATGTCAAAATTAGTGGCTATACAATTCCAAAAGGTTGGAAAGTTCTAGTTTGGTTTAGAAGTGTTCATTACGATCCCGAAACTTATCCGAATCCAAAAGAATTTAACCCGTCAAGATGGGATGTAAGAACACACATATATATAATTCAATACTCATTTTTAAGCAATTAA 1200 42.75 MYTAVLAAVLAVAVWVLKNANQWVYETARLGSKRFALPPGDLGWPFIGNMWSFLRAFKSPYPDSFMDSFLSRYGNTGIYKAFMFGSPSVIVTSAEACKRVLNDDEAFGSGWPPSTMKLIGENSFIGISYQEHKRLRRITAAPVNGYDALATYLTYIEKIVVSSLEKWASMGEIEFLTQLRKLTFKIIMYIFLSSESEAIMEALEREYTELNHGVRAMAINIPGFAYHKALKARRNLVATFESIVRGRRKERERKNKLRRKRRDMMDALLDAEDEDGRRLSDEEIIDVLIMYLNAGHESSGHTMMWAAIFLQQHPQFLQKAKVVIDETLRVVTFSLTVFREAKHDVKISGYTIPKGWKVLVWFRSVHYDPETYPNPKEFNPSRWDVRTHIYIIQYSFLSN 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 27505028 27514373 + Lsi09G018690.1 Lsi09g01869 671482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi09g01869 399 Pfam Cytochrome P450 322 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi09g01869 399 Pfam Cytochrome P450 38 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi09g01869 399 Coils Coil 247 274 - -
Lsi09g01869 399 PRINTS B-class P450 signature 339 366 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi09g01869 399 PRINTS B-class P450 signature 367 382 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi09g01869 399 PRINTS B-class P450 signature 322 333 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi09g01869 399 PRINTS B-class P450 signature 127 138 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi09g01869 399 Gene3D Cytochrome P450 27 398 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi09g01869 399 SUPERFAMILY Cytochrome P450 32 389 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi09g01869 399 PANTHER ENT-KAURENOIC ACID OXIDASE 2 323 387 - -
Lsi09g01869 399 PANTHER ENT-KAURENOIC ACID OXIDASE 2 10 321 - -
Lsi09g01869 399 PANTHER CYTOCHROME P450 26 323 387 - -
Lsi09g01869 399 PANTHER CYTOCHROME P450 26 10 321 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi07g01221 Lsi-Chr7:17797013 Lsi09g01869 Lsi-Chr9:27505028 2.74E-87 dispersed
Lsi07g01222 Lsi-Chr7:17828217 Lsi09g01869 Lsi-Chr9:27505028 7.75E-99 dispersed
Lsi09g01869 Lsi-Chr9:27505028 Lsi04g01563 Lsi-Chr4:23194296 8.70E-57 dispersed
Lsi05g01914 Lsi-Chr5:26348060 Lsi09g01869 Lsi-Chr9:27505028 1.45E-161 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi09g01869 K04123 - csv:101220640 648.662