Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi10g00018 ATGGATAAACCGAACCCAAATCAACGGCCATCATGGGATTTGCTCCATTTTACATGGGGTATGCAATACGGTTGGGTGGGAGGCATATTTATTGGCAAATGGGGACTTTATCCTCAACCGTCATCCCTTATGCGCACTACCTGTTCGATCAAAGTCCTCAGACTGCTTTTGGCTTCTGCTTCTGCTTACTTCACCTACTTCAAAGTGGGTGTTTCACTCTCTTTTTCTTTTTTTGAATCATGCAGAGAATCAAACACAACAATCTCTCCTGGAAATGAATCAAAAGAAGACAGAAAAAGCTGGCAATCTTCTTCCAAAGGGGCAATATCAACAGATGCAAACATAGCAGAAAGGGCGGCGGAGTGGGGGTTGGTGGTGGACACAAACGTGGAAGAAGGCAGTTTCAAGGCTGTGGGGAGAGCATCAGGGGAAGGAGGGGGCAGCAAAAGATCATCAGAGAAAATCAGTGGCACAGGAAGAACTTCAAGCTTTAGCAATGAAACCTCTGGAGTTTTCCCAAGGGTATCGCAAGAGTTGAAGGATGCTTTGGCTTCTTTGGAACAGACATTTGTGGTCTCTGATGCCACCAAACCAGAATGCCCCATCGTGTATGCGAGCAGTGGCTTCTTTGGTATGACTGGTTATGCTTCAGAGGAGGTCATTGGAAGGAACTGCCGTTTTCTTCAGGGACCAGAGACGGACCAGAAAGAAGTTGACAAAATTCGATATGCAGTGAAAAACGGCAAAAGCTACTGCGGGAGGCTTTTGAACTACAAGAAGAATGGCACTCCTTTCTGGAATCTTCTGACAGTCACGCCTATCAAGGATGACAGTGGCAATACTATCAAATTTATTGGAATGCAGGTAGAAGTAAGCAAGTACACAGAAGGCATAAATGATAAAGCAATACGACCGAACGGGTTGCCAAAGTCATTAATCCGCTATGATGGTAACTGGTCTTCCAAAGTTCTATGGAATGTAATGCTACCTTCACCTCTAATTTTCACTCTTGATGTTTCAGCTCGCCAGAAGGAAAAGGCAATGGTTTCCATCACAGAGGTCGTTCAGACTGTGAAGAATCCTCGATCTCATAATCGAGCTATGAGTCATGACACTACCAGAAAAAAAGAAGATTTGGAAAAGTTCAATCTTGACTATGTTCTTCCAAAGTCGGTTGAAGCTGCAAATGATACACCGGGTAGACAAACTCCTCAACAAGACCTCAGAGATGATGGGTTAGGCAAGAAACCTAGGTTATCAAGTCGAGTTTCTCTAATGGGTTTCAAAGGGAAATCTCTAAGCAGTTCAAGGAAGCTTGAAGTAACAGCCTTTGAACCAGAAATTTTGATGACCGATGAAGTAGAACGGACTGATAGTTGGGACCACGCTGAAAGAGAAAAGGATATTCGCCAAGGAATTGATTTAGCTACCACATTGGAGCGAATTGAGAAAAATTTTGTCATTACTGATCCAAGGCTTCCTGATAATCCAATTATATTTGCATCCGACAGCTTTCTTGAATTGACAGAATATACACGTGAGGAAATTTTGGGACGAAACTGTCGGTTTCTTCAAGGACCTGAAACAGATCAAGAAACTGTCTCAAAGATAAGGGATGCAATTAGGGAACAAAGAGAAATAACTGTCCAGTTGATCAACTATACCAAGACTGGCAAAAAGTTCTGGAATTTATTTCACTTGCAACCAATGCGTGATGAAACGGGAGAGCTTCAGTATTTTATTGGTGTACAACTAGATGGAAGTGGTCATGTGGAACCTTTGCAAAACCGCCTTTCTGAGACAGCAGAGCTGCAAAGTGCCAAGCTGGTTAAAGCCACTGCAGAGAATGTTGATGAGGCTGTCCGTGAACTTCCTGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTCATTCTCAACCAGTCTTCCCAAGGCCTCACAAGAAGCATAATTCTTCTTGGACTGCTATACAAAAGCTTCTAGATCCTGTAAAATTATCCGACGTGGTGAAAAAATTGGACTCCAACATTTTAAGCCAATTAAACCACTGGGTTGTGGAGACACTGGCAGTCGAGGTACGCGTAAGCTGGCCCGGACACTCACGAATATCCTACGAAACCCAATGTTTGGTAAATGAAATTGATAAGCAGCCATCATATCTATTCGGTCTATCTGGGACTTGGACGCTGCTATTTGGACTTTTCCTTTCAGCTGACAAACATATTTGCTGCAGTGTTCATCTGGTGGAACTTCTAGGTACAAGTGAACTTTATGCCTTGAAAGCAATGGAGAAATCAGCACTTTTGAATCGAAACAAGGTTCACAGAGCATGCATTGAAAGGCAAATCATTGCGCTTCTGGATCATCCTTTTCTTCCAACACTATACACTTCATTTGAGACCCCTACGCACGTATGTTTGATAACAGACTTCTGCCCTGGTGGGGAGTTATTCGCATTGCTTGATAAGCAACCAATGAAAATGTTTAAAGAGGATTCTGCAAGGTTCTATGCTGCAGAGGTCGTCATTGGCTTGGAATATCTTCACTGTCTAGGAATCATTTACCGAGATCTGAAGCCTGAAAATATTCTTCTCCAGAAGGATGGACATGTTACGCTTGCTGACTTCGATTTATCACTTGTGACATCCTGCAAGCCGCAGATTGTGAAGTATCCATTGCCTCATGGTAGAAGGAGATCTCGAAGTCAACCACCACCAGTATTTGTCGCAGAGCCAATCACACAATCAAATTCTTTTGTTGGAACCGAAGAATATATTGCTCCTGAAATTATAACAGGGGAAGGTCACAGCAGCTCTATCGATTGGTGGGCTCTTGGTATATTGTTGTATGAGATGCTTTATGGTCGCACGCCTTTCAGAGGAAAGAACAGGCAGAAGACTTTTGGTAACATCTTGCACAAAGATCTCACTTTCCCAAGTAGCATTCAGGTAAGTCTTGCAGCAAGGCAGTTGATCAATGCATTGCTACAAAGAGACCCGGCCAGACGTTTAGGATCAAGTACAGGTGCAAATGAAATCAAGCAGCACCCTTTTTTCCAATCAATTAACTGGCCACTGATCCGGTGTATGGTCCCGCCACCATTAGAATCACCTCTTCACCTTACTGGAAAAGATGGAACAACCAAGAAAGTAAACTGGGAAGATGATGGTGTGCTTAGCCCAATGGATATGGATTTTTTCTGA 3204 43.23 MDKPNPNQRPSWDLLHFTWGMQYGWVGGIFIGKWGLYPQPSSLMRTTCSIKVLRLLLASASAYFTYFKVGVSLSFSFFESCRESNTTISPGNESKEDRKSWQSSSKGAISTDANIAERAAEWGLVVDTNVEEGSFKAVGRASGEGGGSKRSSEKISGTGRTSSFSNETSGVFPRVSQELKDALASLEQTFVVSDATKPECPIVYASSGFFGMTGYASEEVIGRNCRFLQGPETDQKEVDKIRYAVKNGKSYCGRLLNYKKNGTPFWNLLTVTPIKDDSGNTIKFIGMQVEVSKYTEGINDKAIRPNGLPKSLIRYDGNWSSKVLWNVMLPSPLIFTLDVSARQKEKAMVSITEVVQTVKNPRSHNRAMSHDTTRKKEDLEKFNLDYVLPKSVEAANDTPGRQTPQQDLRDDGLGKKPRLSSRVSLMGFKGKSLSSSRKLEVTAFEPEILMTDEVERTDSWDHAEREKDIRQGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQETVSKIRDAIREQREITVQLINYTKTGKKFWNLFHLQPMRDETGELQYFIGVQLDGSGHVEPLQNRLSETAELQSAKLVKATAENVDEAVRELPDANLRPEDLWAIHSQPVFPRPHKKHNSSWTAIQKLLDPVKLSDVVKKLDSNILSQLNHWVVETLAVEVRVSWPGHSRISYETQCLVNEIDKQPSYLFGLSGTWTLLFGLFLSADKHICCSVHLVELLGTSELYALKAMEKSALLNRNKVHRACIERQIIALLDHPFLPTLYTSFETPTHVCLITDFCPGGELFALLDKQPMKMFKEDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVTLADFDLSLVTSCKPQIVKYPLPHGRRRSRSQPPPVFVAEPITQSNSFVGTEEYIAPEIITGEGHSSSIDWWALGILLYEMLYGRTPFRGKNRQKTFGNILHKDLTFPSSIQVSLAARQLINALLQRDPARRLGSSTGANEIKQHPFFQSINWPLIRCMVPPPLESPLHLTGKDGTTKKVNWEDDGVLSPMDMDFF 1067
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 296026 312832 - Lsi10G000180.1 Lsi10g00018 671575

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi10g00018 1067 MobiDBLite consensus disorder prediction 393 418 - -
Lsi10g00018 1067 Gene3D PAS domain 460 624 - -
Lsi10g00018 1067 MobiDBLite consensus disorder prediction 137 169 - -
Lsi10g00018 1067 PANTHER FLIPPASE KINASE 1-RELATED 340 662 - -
Lsi10g00018 1067 PANTHER FLIPPASE KINASE 1-RELATED 145 317 - -
Lsi10g00018 1067 PANTHER FLIPPASE KINASE 1-RELATED 744 1065 - -
Lsi10g00018 1067 SMART pas_2 177 246 IPR000014 -
Lsi10g00018 1067 SMART pas_2 473 542 IPR000014 -
Lsi10g00018 1067 Pfam Protein kinase domain 752 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lsi10g00018 1067 SMART serkin_6 736 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lsi10g00018 1067 CDD PAS 202 291 IPR000014 -
Lsi10g00018 1067 Gene3D PAS domain 189 309 - -
Lsi10g00018 1067 ProSiteProfiles PAC domain profile. 249 303 IPR000700 -
Lsi10g00018 1067 PANTHER BNAA02G07840D PROTEIN 145 317 - -
Lsi10g00018 1067 PANTHER BNAA02G07840D PROTEIN 340 662 - -
Lsi10g00018 1067 PANTHER BNAA02G07840D PROTEIN 744 1065 - -
Lsi10g00018 1067 Gene3D Phosphorylase Kinase; domain 1 745 815 - -
Lsi10g00018 1067 ProSiteProfiles Protein kinase domain profile. 721 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lsi10g00018 1067 SUPERFAMILY Protein kinase-like (PK-like) 745 1043 IPR011009 -
Lsi10g00018 1067 Gene3D Transferase(Phosphotransferase) domain 1 816 1035 - -
Lsi10g00018 1067 ProSiteProfiles PAS repeat profile. 175 248 IPR000014 -
Lsi10g00018 1067 MobiDBLite consensus disorder prediction 83 106 - -
Lsi10g00018 1067 ProSiteProfiles PAS repeat profile. 471 544 IPR000014 -
Lsi10g00018 1067 ProSiteProfiles PAC domain profile. 545 599 IPR000700 -
Lsi10g00018 1067 SUPERFAMILY PYP-like sensor domain (PAS domain) 487 586 IPR035965 -
Lsi10g00018 1067 CDD PAS 486 586 IPR000014 -
Lsi10g00018 1067 CDD STKc_phototropin_like 745 1038 - -
Lsi10g00018 1067 SMART pac_2 548 590 IPR001610 -
Lsi10g00018 1067 SMART pac_2 252 294 IPR001610 -
Lsi10g00018 1067 Pfam PAS domain 196 292 IPR000014 -
Lsi10g00018 1067 Pfam PAS domain 494 586 IPR000014 -
Lsi10g00018 1067 SUPERFAMILY PYP-like sensor domain (PAS domain) 195 292 IPR035965 -
Lsi10g00018 1067 MobiDBLite consensus disorder prediction 149 169 - -
Lsi10g00018 1067 ProSitePatterns Serine/Threonine protein kinases active-site signature. 853 865 IPR008271 GO:0004672|GO:0006468
Lsi10g00018 1067 TIGRFAM sensory_box: PAS domain S-box protein 201 292 IPR000014 -
Lsi10g00018 1067 TIGRFAM sensory_box: PAS domain S-box protein 496 586 IPR000014 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi10g00018 K20715 PHOT; phototropin [EC:2.7.11.1] - csv:101215355 1007.28
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi04g00459 Lsi-Chr4:4356328 Lsi10g00018 Lsi-Chr10:296026 5.24E-25 dispersed
Lsi10g00018 Lsi-Chr10:296026 Lsi10g01321 Lsi-Chr10:17417465 5.21E-140 dispersed
Lsi04g00123 Lsi-Chr4:1376423 Lsi10g00018 Lsi-Chr10:296026 1.90E-45 transposed
Lsi04g01097 Lsi-Chr4:13301322 Lsi10g00018 Lsi-Chr10:296026 2.85E-09 transposed
Lsi05g01496 Lsi-Chr5:22783776 Lsi10g00018 Lsi-Chr10:296026 3.64E-31 transposed
Lsi11g00764 Lsi-Chr11:8612074 Lsi10g00018 Lsi-Chr10:296026 2.22E-06 transposed
Lsi10g00018 Lsi-Chr10:296026 Lsi11g01320 Lsi-Chr11:21818657 8.84E-106 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lsi04g00123 . 1 272 AGC Kinase Gene Family AT5G04510 85.4 2.7e-138 488.4
Lsi04g00123 . 1 447 AGC Kinase Gene Family AT3G10540 76.9 1.3e-200 696.0
Lsi06g01506 . 1001 1434 AGC Kinase Gene Family AT3G08730 55.8 4.9e-136 481.5
Lsi06g01506 . 1001 1432 AGC Kinase Gene Family AT3G08720 58.2 9.7e-140 493.8
Lsi09g00549 . 1 1179 AGC Kinase Gene Family AT5G62310 62.3 0.0e+00 1342.0
Lsi09g00549 . 143 1171 AGC Kinase Gene Family AT3G17850 53.8 3.5e-296 1015.0
Lsi02g00007 . 2 531 AGC Kinase Gene Family AT3G17850 62.9 6.9e-188 655.2
Lsi02g00006 . 3 186 AGC Kinase Gene Family AT3G17850 60.3 6.1e-75 280.0
Lsi02g00005 . 13 139 AGC Kinase Gene Family AT3G17850 68.2 5.2e-42 170.6
Lsi02g00007 . 18 531 AGC Kinase Gene Family AT1G48490 61.9 6.9e-177 618.6
Lsi02g00006 . 3 186 AGC Kinase Gene Family AT1G48490 52.7 2.8e-61 234.6
Lsi02g00005 . 13 135 AGC Kinase Gene Family AT1G48490 63.7 6.9e-36 150.2
Lsi09g01229 . 1 523 AGC Kinase Gene Family AT4G14350 75.8 1.4e-241 832.4
Lsi02g02182 . 1 573 AGC Kinase Gene Family AT4G14350 65.8 5.9e-213 737.3
Lsi01g00049 . 30 588 AGC Kinase Gene Family AT4G14350 60.8 1.7e-188 656.0
Lsi04g01409 . 17 464 AGC Kinase Gene Family AT4G14350 67.7 8.4e-175 610.5
Lsi06g00299 . 30 482 AGC Kinase Gene Family AT4G14350 68.1 1.4e-174 609.8
Lsi08g01474 . 32 568 AGC Kinase Gene Family AT4G14350 54.6 1.3e-156 550.1
Lsi02g02182 . 1 529 AGC Kinase Gene Family AT1G03920 71.8 2.0e-227 785.4
Lsi09g01229 . 1 495 AGC Kinase Gene Family AT1G03920 72.9 2.3e-220 761.9
Lsi01g00049 . 1 588 AGC Kinase Gene Family AT1G03920 57.5 1.9e-190 662.5
Lsi06g00299 . 30 482 AGC Kinase Gene Family AT1G03920 68.6 1.0e-175 613.6
Lsi04g01409 . 17 464 AGC Kinase Gene Family AT1G03920 68.7 1.7e-175 612.8
Lsi08g01474 . 24 540 AGC Kinase Gene Family AT1G03920 56.0 1.5e-158 556.6
Lsi09g01229 . 1 523 AGC Kinase Gene Family AT3G23310 74.5 7.2e-230 793.5
Lsi02g02182 . 112 529 AGC Kinase Gene Family AT3G23310 81.7 1.5e-203 706.1
Lsi01g00049 . 73 588 AGC Kinase Gene Family AT3G23310 62.7 6.4e-178 620.9
Lsi06g00299 . 64 482 AGC Kinase Gene Family AT3G23310 71.0 2.9e-170 595.5
Lsi04g01409 . 51 474 AGC Kinase Gene Family AT3G23310 69.3 4.1e-169 591.7
Lsi08g01474 . 105 540 AGC Kinase Gene Family AT3G23310 61.3 7.1e-153 537.7
Lsi06g00299 . 7 512 AGC Kinase Gene Family AT2G19400 74.8 6.7e-222 766.9
Lsi04g01409 . 5 476 AGC Kinase Gene Family AT2G19400 74.2 3.8e-209 724.5
Lsi09g01229 . 39 487 AGC Kinase Gene Family AT2G19400 66.3 1.5e-176 616.3
Lsi02g02182 . 42 521 AGC Kinase Gene Family AT2G19400 61.0 1.1e-168 590.1
Lsi01g00049 . 14 451 AGC Kinase Gene Family AT2G19400 62.2 7.3e-160 560.8
Lsi08g01474 . 27 559 AGC Kinase Gene Family AT2G19400 52.6 1.4e-150 530.0
Lsi02g02182 . 1 529 AGC Kinase Gene Family AT2G20470 73.3 8.2e-220 760.0
Lsi09g01229 . 37 526 AGC Kinase Gene Family AT2G20470 74.8 6.1e-215 743.8
Lsi01g00049 . 1 599 AGC Kinase Gene Family AT2G20470 58.0 2.3e-190 662.1
Lsi06g00299 . 30 482 AGC Kinase Gene Family AT2G20470 69.4 6.6e-177 617.5
Lsi04g01409 . 17 464 AGC Kinase Gene Family AT2G20470 69.2 4.0e-174 608.2
Lsi08g01474 . 32 570 AGC Kinase Gene Family AT2G20470 52.9 4.8e-151 531.6
Lsi04g01409 . 1 501 AGC Kinase Gene Family AT4G33080 80.4 1.1e-234 809.3
Lsi06g00299 . 20 488 AGC Kinase Gene Family AT4G33080 77.3 7.6e-215 743.4
Lsi09g01229 . 43 487 AGC Kinase Gene Family AT4G33080 70.6 1.4e-184 642.9
Lsi02g02182 . 32 521 AGC Kinase Gene Family AT4G33080 63.1 2.6e-175 612.1
Lsi01g00049 . 18 452 AGC Kinase Gene Family AT4G33080 66.4 8.2e-169 590.5
Lsi08g01474 . 30 543 AGC Kinase Gene Family AT4G33080 56.5 4.0e-155 545.0
Lsi09g01229 . 94 505 AGC Kinase Gene Family AT1G30640 71.4 1.3e-176 616.3
Lsi02g02182 . 129 529 AGC Kinase Gene Family AT1G30640 71.4 5.6e-172 600.9
Lsi01g00049 . 90 590 AGC Kinase Gene Family AT1G30640 59.3 3.2e-167 585.1
Lsi04g01409 . 68 464 AGC Kinase Gene Family AT1G30640 65.6 5.5e-151 531.2
Lsi06g00299 . 81 527 AGC Kinase Gene Family AT1G30640 59.3 7.4e-148 520.8
Lsi08g01474 . 121 569 AGC Kinase Gene Family AT1G30640 56.9 3.4e-145 511.9
Lsi08g01474 . 1 576 AGC Kinase Gene Family AT5G09890 70.2 1.7e-225 778.9
Lsi09g01229 . 37 486 AGC Kinase Gene Family AT5G09890 65.8 5.2e-171 597.8
Lsi02g02182 . 38 520 AGC Kinase Gene Family AT5G09890 60.4 2.3e-166 582.4
Lsi04g01409 . 17 465 AGC Kinase Gene Family AT5G09890 63.9 6.6e-166 580.9
Lsi06g00299 . 28 488 AGC Kinase Gene Family AT5G09890 60.6 7.1e-160 560.8
Lsi01g00049 . 14 451 AGC Kinase Gene Family AT5G09890 61.0 4.0e-155 545.0
Lsi02g01169 . 144 608 AGC Kinase Gene Family AT5G55910 79.7 2.2e-206 715.3
Lsi01g00506 . 129 612 AGC Kinase Gene Family AT5G55910 72.5 5.6e-194 674.1
Lsi03g01351 . 261 760 AGC Kinase Gene Family AT5G55910 66.4 2.2e-174 609.0
Lsi05g02229 . 278 727 AGC Kinase Gene Family AT5G55910 67.3 2.7e-172 602.1
Lsi10g01180 . 470 877 AGC Kinase Gene Family AT5G55910 61.7 1.8e-147 519.6
Lsi01g01942 . 108 604 AGC Kinase Gene Family AT5G55910 57.0 2.5e-146 515.8
Lsi02g01169 . 129 608 AGC Kinase Gene Family AT4G26610 77.5 2.4e-208 721.8
Lsi01g00506 . 145 612 AGC Kinase Gene Family AT4G26610 74.4 1.3e-195 679.5
Lsi03g01351 . 257 760 AGC Kinase Gene Family AT4G26610 67.3 3.9e-179 624.8
Lsi05g02229 . 278 727 AGC Kinase Gene Family AT4G26610 69.0 6.7e-179 624.0
Lsi10g01180 . 470 877 AGC Kinase Gene Family AT4G26610 62.0 2.7e-148 522.3
Lsi01g01942 . 110 604 AGC Kinase Gene Family AT4G26610 56.0 5.2e-147 518.1
Lsi05g02229 . 68 727 AGC Kinase Gene Family AT2G44830 74.0 1.6e-272 935.6
Lsi02g01169 . 134 608 AGC Kinase Gene Family AT2G44830 65.5 2.1e-176 616.3
Lsi01g00506 . 178 612 AGC Kinase Gene Family AT2G44830 65.0 5.6e-169 591.7
Lsi03g01351 . 230 760 AGC Kinase Gene Family AT2G44830 54.2 2.1e-160 563.1
Lsi10g01180 . 470 877 AGC Kinase Gene Family AT2G44830 60.5 1.7e-141 500.4
Lsi01g01942 . 106 604 AGC Kinase Gene Family AT2G44830 54.2 5.4e-140 495.4
Lsi02g01169 . 186 608 AGC Kinase Gene Family AT5G40030 67.8 2.1e-156 549.3
Lsi01g00506 . 189 612 AGC Kinase Gene Family AT5G40030 66.6 3.0e-155 545.4
Lsi05g02229 . 307 727 AGC Kinase Gene Family AT5G40030 66.2 5.6e-154 541.2
Lsi03g01351 . 288 760 AGC Kinase Gene Family AT5G40030 59.9 7.6e-143 504.2
Lsi01g01942 . 110 604 AGC Kinase Gene Family AT5G40030 52.7 9.0e-136 480.7
Lsi10g01180 . 500 880 AGC Kinase Gene Family AT5G40030 61.9 1.7e-134 476.5
Lsi01g01942 . 109 604 AGC Kinase Gene Family AT3G12690 65.4 4.5e-179 624.8
Lsi01g00506 . 185 612 AGC Kinase Gene Family AT3G12690 62.0 1.0e-151 533.9
Lsi02g01169 . 182 573 AGC Kinase Gene Family AT3G12690 66.8 9.7e-150 527.3
Lsi05g02229 . 308 727 AGC Kinase Gene Family AT3G12690 62.6 6.3e-149 524.6
Lsi03g01351 . 287 728 AGC Kinase Gene Family AT3G12690 57.7 4.2e-137 485.3
Lsi10g01180 . 491 882 AGC Kinase Gene Family AT3G12690 60.2 1.3e-133 473.8
Lsi01g01942 . 110 604 AGC Kinase Gene Family AT1G16440 63.9 7.8e-172 600.5
Lsi02g01169 . 186 608 AGC Kinase Gene Family AT1G16440 62.5 3.5e-148 521.9
Lsi01g00506 . 189 612 AGC Kinase Gene Family AT1G16440 61.4 8.7e-147 517.3
Lsi05g02229 . 306 688 AGC Kinase Gene Family AT1G16440 65.2 7.6e-143 504.2
Lsi03g01351 . 288 729 AGC Kinase Gene Family AT1G16440 58.1 8.2e-137 484.2
Lsi10g01180 . 500 877 AGC Kinase Gene Family AT1G16440 58.7 1.4e-128 456.8
Lsi01g01942 . 110 604 AGC Kinase Gene Family AT1G79250 67.0 4.2e-182 634.8
Lsi02g01169 . 177 572 AGC Kinase Gene Family AT1G79250 68.8 6.9e-153 537.7
Lsi01g00506 . 180 575 AGC Kinase Gene Family AT1G79250 67.5 2.0e-152 536.2
Lsi05g02229 . 298 688 AGC Kinase Gene Family AT1G79250 66.9 1.2e-149 526.9
Lsi03g01351 . 274 729 AGC Kinase Gene Family AT1G79250 59.6 6.5e-143 504.6
Lsi10g01180 . 491 880 AGC Kinase Gene Family AT1G79250 57.9 3.0e-132 469.2
Lsi05g02229 . 273 727 AGC Kinase Gene Family AT5G03640 56.1 9.8e-144 508.1
Lsi01g00506 . 185 612 AGC Kinase Gene Family AT5G03640 58.5 6.4e-143 505.4
Lsi01g01942 . 110 550 AGC Kinase Gene Family AT5G03640 51.5 5.1e-124 442.6
Lsi02g01169 . 150 608 AGC Kinase Gene Family AT2G36350 57.3 2.4e-145 513.5
Lsi05g02229 . 279 727 AGC Kinase Gene Family AT2G36350 57.3 2.6e-144 510.0
Lsi01g00506 . 178 612 AGC Kinase Gene Family AT2G36350 59.2 1.9e-142 503.8
Lsi03g01351 . 255 760 AGC Kinase Gene Family AT2G36350 50.8 2.2e-130 463.8
Lsi01g01942 . 110 549 AGC Kinase Gene Family AT2G36350 51.8 2.5e-118 423.7
Lsi11g00302 . 72 491 AGC Kinase Gene Family AT2G26700 56.1 9.5e-136 480.7
Lsi07g00832 . 10 469 AGC Kinase Gene Family AT3G14370 62.1 1.3e-150 530.0
Lsi10g01180 . 522 876 AGC Kinase Gene Family AT3G44610 55.2 2.5e-108 389.4
Lsi01g00506 . 212 577 AGC Kinase Gene Family AT3G44610 54.2 4.2e-108 388.7
Lsi02g01169 . 209 582 AGC Kinase Gene Family AT3G44610 51.9 1.8e-106 383.3
Lsi05g02229 . 330 702 AGC Kinase Gene Family AT3G44610 50.6 2.8e-104 375.9
Lsi07g00832 . 2 469 AGC Kinase Gene Family AT1G53700 62.0 8.3e-163 570.5
Lsi02g01169 . 110 608 AGC Kinase Gene Family AT5G47750 84.0 1.9e-233 805.4
Lsi01g00506 . 49 612 AGC Kinase Gene Family AT5G47750 74.2 3.6e-224 774.6
Lsi05g02229 . 244 727 AGC Kinase Gene Family AT5G47750 70.1 5.7e-190 661.0
Lsi03g01351 . 222 760 AGC Kinase Gene Family AT5G47750 63.8 6.4e-181 630.9
Lsi10g01180 . 468 877 AGC Kinase Gene Family AT5G47750 62.4 2.9e-149 525.8
Lsi01g01942 . 108 604 AGC Kinase Gene Family AT5G47750 55.8 1.4e-143 506.9
Lsi03g01351 . 218 760 AGC Kinase Gene Family AT3G27580 63.2 8.7e-183 637.1
Lsi02g01169 . 165 608 AGC Kinase Gene Family AT3G27580 67.7 4.7e-168 588.2
Lsi01g00506 . 178 612 AGC Kinase Gene Family AT3G27580 66.5 7.0e-164 574.3
Lsi05g02229 . 272 727 AGC Kinase Gene Family AT3G27580 62.1 2.3e-159 559.3
Lsi01g01942 . 110 568 AGC Kinase Gene Family AT3G27580 56.8 4.3e-137 485.3
Lsi10g01180 . 485 877 AGC Kinase Gene Family AT3G27580 59.9 5.2e-135 478.4
Lsi05g02229 . 308 713 AGC Kinase Gene Family AT2G34650 50.5 3.7e-101 365.5
Lsi10g01180 . 499 876 AGC Kinase Gene Family AT2G34650 50.8 3.3e-97 352.4
Lsi02g01169 . 150 608 AGC Kinase Gene Family AT3G52890 59.3 4.1e-150 529.3
Lsi01g00506 . 178 612 AGC Kinase Gene Family AT3G52890 60.5 4.6e-149 525.8
Lsi05g02229 . 279 727 AGC Kinase Gene Family AT3G52890 58.6 3.3e-147 519.6
Lsi03g01351 . 226 760 AGC Kinase Gene Family AT3G52890 50.1 9.0e-137 485.0
Lsi01g01942 . 110 546 AGC Kinase Gene Family AT3G52890 52.0 2.4e-121 433.7
Lsi02g02126 . 6 407 AGC Kinase Gene Family AT3G25250 58.4 5.7e-123 438.0
Lsi02g02126 . 7 411 AGC Kinase Gene Family AT4G13000 58.0 2.9e-123 438.7
Lsi10g01047 . 10 399 AGC Kinase Gene Family AT1G51170 60.5 1.9e-128 456.1
Lsi10g01047 . 7 401 AGC Kinase Gene Family AT3G20830 61.9 4.6e-130 461.5
Lsi10g01321 . 12 1007 AGC Kinase Gene Family AT3G45780 68.7 0.0e+00 1318.9
Lsi10g00018 . 117 1051 AGC Kinase Gene Family AT3G45780 53.9 2.7e-272 935.3
Lsi10g00018 . 113 1067 AGC Kinase Gene Family AT5G58140 64.1 0.0e+00 1142.1
Lsi10g01321 . 115 981 AGC Kinase Gene Family AT5G58140 59.8 2.1e-287 985.3
Lsi11g01320 . 187 874 AGC Kinase Gene Family AT5G58140 51.3 5.0e-209 724.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003894 2 4 2 1 2 1 1 1 1 1 1 1 2 1 1 2 1 4 2 1 1 1 1 1 1 1 1 2 3 1 45
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83933 PF00069 Pkinase 3.70E-58 CL0016 Lsi PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi10g00018 Lsi_Chr10 FPKM 24.316914 25.528009 83.053238 82.622162 103.072716 112.954895 105.520317 179.194977 180.827469 167.594193