Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi10g00170 | ATGGATTCTCTCTACGCTTTCCTTCTTTTCCTTCTTGCTTTCCTTTTTCTGCAACTCAGAACCCGCCGGAGAAATCTGCCGCCGAGCCCACCGTCAGTTCCGATTATTGGTCATCTCCACCTCCTACAACGCCCAATCCACCGGAGCTTCCAAAACATCGCCGCCAAATACGGACCCATTTTCACTCTGCGATTCGGATCTCGCCTTGCCCTGCTAGTCTCTTCACTTCAAATAGCCCAAGAATGCTTCACCAAAAACGACCTCATCTTTGCCAACCGCCCGCGTTTGCTCATCGGAAAATACATCGGCTACGACAACACCACCATGGCTACCGCCCCTTATGGCGAACACTGGCGGAACCTCCGCCGCCTCGCCGCCGTGGAGATCTTCTCTCCGACGCGCCTCAAAGCGTCTCTAGGCATCCGGAAGGATGAAATCCGACGATTGTTGGTCAAACTCCATTCGGAATCGTTCGCTAAGGTGGAGTTGAGATCGATGTTTTCGGAACTGAGTTTCAACATCGTGATGAGGATCGTGGCCGGAAAACGGTACTACGGCGATGAGGTTTCCGATGAGGCGGAGGCCAGGGAATTCAGAGAGCTTATGGAAGAGATTTCGCGTCATGGGGGCACTTCGCAATGGGTGGATTTCATGCCGATTTTGAAATGGATTGGGTTTGATGGATATGAGAAGAGTTTGGCCAAATCGGGGAAAAGGACCGATCAATTCGTGCAGGAATTGGTTGAAGAACAACGGAACAAAAAAGTATTGGCAAGAGAAGAACAGAGTTCTCTGCTTCATCGGCTTCTGGAATTGCAGCTCTCTAAACCCGAATACTACACCGATCAGACCATCAAAGGGTTCGTTCTGGTTAAGATATTAGCCAAAGCCAAAGCTGAGATAGACACCAAGATCGGTCAAGATCGACCCATTGAGGAAACAGATATCGCCAACCTCAACTACCTTCAAGCCATTATTTCTGAAACCTTTCGATTGCACCCTCCAGCCCCAATGCTCCTCACACACTATTCCTCCGAAGACTGCACCGTTGCAGGCTACGATATTCCACGTGGCACGATGTTGTTGGTCAATGCTTGGGCAATTCACAGAGACCCGAAGCTGTGGGACGACCCGACGAGCTTCCGACCGGAGAGATTCTTGGGGGAAGGGAATGAGTTGCAGGCCAACAAACTGATTCCTTTTGGAGTTGGAAGGAGGGCTTGTCCTGGGGAAATTATGGGTTTACGTATTATAGGATTGACTTTGGGTCTATTGATTCAGTGTTATGAGTGGAAAAAGGTTGGATATGAAAACGTAGATATGACTGAAGGTGGAGGTATCACCATTCTCAAAGTGAAGCCTTTGGAAACCATGTGTAAAGCTCGACCAATCATGGATAAAGTTTTTTCAAATGGTTTGGACTAA | 1425 | 48.84 | MDSLYAFLLFLLAFLFLQLRTRRRNLPPSPPSVPIIGHLHLLQRPIHRSFQNIAAKYGPIFTLRFGSRLALLVSSLQIAQECFTKNDLIFANRPRLLIGKYIGYDNTTMATAPYGEHWRNLRRLAAVEIFSPTRLKASLGIRKDEIRRLLVKLHSESFAKVELRSMFSELSFNIVMRIVAGKRYYGDEVSDEAEAREFRELMEEISRHGGTSQWVDFMPILKWIGFDGYEKSLAKSGKRTDQFVQELVEEQRNKKVLAREEQSSLLHRLLELQLSKPEYYTDQTIKGFVLVKILAKAKAEIDTKIGQDRPIEETDIANLNYLQAIISETFRLHPPAPMLLTHYSSEDCTVAGYDIPRGTMLLVNAWAIHRDPKLWDDPTSFRPERFLGEGNELQANKLIPFGVGRRACPGEIMGLRIIGLTLGLLIQCYEWKKVGYENVDMTEGGGITILKVKPLETMCKARPIMDKVFSNGLD | 474 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2764165 | 2767702 | + | Lsi10G001700.1 | Lsi10g00170 | 671727 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi10g00170 | 474 | Pfam | Cytochrome P450 | 27 | 291 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00170 | 474 | Pfam | Cytochrome P450 | 293 | 445 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00170 | 474 | PANTHER | CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED | 6 | 295 | - | - | |
Lsi10g00170 | 474 | Gene3D | Cytochrome P450 | 294 | 462 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00170 | 474 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 292 | 467 | - | - | |
Lsi10g00170 | 474 | Gene3D | Cytochrome P450 | 19 | 293 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00170 | 474 | PRINTS | E-class P450 group I signature | 398 | 408 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00170 | 474 | PRINTS | E-class P450 group I signature | 408 | 431 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00170 | 474 | PRINTS | E-class P450 group I signature | 170 | 188 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00170 | 474 | PRINTS | E-class P450 group I signature | 78 | 99 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00170 | 474 | PRINTS | E-class P450 group I signature | 364 | 388 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00170 | 474 | PRINTS | E-class P450 group I signature | 323 | 341 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00170 | 474 | PRINTS | E-class P450 group I signature | 54 | 73 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00170 | 474 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 6 | 295 | - | - | |
Lsi10g00170 | 474 | PANTHER | CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED | 292 | 467 | - | - | |
Lsi10g00170 | 474 | SUPERFAMILY | Cytochrome P450 | 27 | 462 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00170 | 474 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 401 | 410 | IPR017972 | GO:0005506|GO:0016705 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi10g00170 | Lsi-Chr10:2764165 | Lsi04g01511 | Lsi-Chr4:22748193 | 4.56E-156 | dispersed | |
Lsi10g00177 | Lsi-Chr10:2874047 | Lsi10g00170 | Lsi-Chr10:2764165 | 4.64E-51 | dispersed | |
Lsi10g00170 | Lsi-Chr10:2764165 | Lsi10g00172 | Lsi-Chr10:2780304 | 1.58E-110 | proximal | |
Lsi10g00169 | Lsi-Chr10:2729368 | Lsi10g00170 | Lsi-Chr10:2764165 | 3.40E-156 | tandem | |
Lsi10g00170 | Lsi-Chr10:2764165 | Lsi10g00171 | Lsi-Chr10:2778155 | 8.97E-152 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi10g00170 | K13260 | - | csv:101210967 | 757.288 |