Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi10g00248 | ATGGAGATTTGGTTCATCGTCGTCGTCTCCCTCTGCATCTGCTCTCTTCTCACCTCCATTTTTACCCATTTCCGAACCTCCACAAAGCTTCCACCAGGCCCTCCTTCAATTCCCATCATCACTAATTTCCTATGGCTCCGCAGATCCCCTCTCCAAATTGAATCTCTTCTCCGCAGTTTCATCACAAAATACGGCCCCATCATCACTCTCCCCATCGGCACCCGCCCCGCCGTCTTCATCGCCGACCGTTCCATCGCCCACAAGGCCCTCATCCTAAATGGCGCTCTCTTCGCCGACCGTCCACCGGCTCTTCCCATCAACAAGATCGCTTCCAGCAACCAACACAACATCAACACCGCCCCTTACGGCCCACTCTGGCGCCTCCTCCGCCGCAATCTCACTTCCCAAATCCTCCATTCTTCCCGTCTCAAGTCCTACGCCCGTGCTCGCAAGTGGGTTTTGGATATCCTTCTTAATCGCTTTCTCTCTCACTCTCAATCCGGAACTCCCGTTTGCGTTGTCGATCATTTTCAGTACGCCATGTTCTGTTTGTTGGTGTTGATGTGTTTTGGGGATAAGCTTGAGGAATCCCAGATTCATGAAATTGAAGACGTGCATCGAGCTATGCTGTTGAATTTTGGGCGTTTCAGCGTCCTCAATTTCTGGCCGAAATTGACCAAGATTTTCCTCCGAAAGCGCTGGGAGACGTTTCTCGAACTCAGAAGAAAGCAAGAGAAAGTCGTCATCTCTTTGATTGAATCAAGAAGGAAAGCCAACCAAAACAGAGAAAACGGAGTCGAAAATAAAGAAGAATTCGTGGTGTCATATGTTGACACACTGCTCGATTTGGAGCTTCCCGACGAGGACAATAGAAAGCTTACTGATGAGGAGATAGTCACCATATGCTCCGAATTCCTCAATGCCGGCACCGATACAACCTCCACGGCTCTGCAATGGATAATGGCGAATTTAGTGAAAAACCCAGAAATTCAGAACAAGCTTTTCGCAGAGATGAAAGAATTAATGGGAGATGGAACAGGGGAAGAGGTGAAGGAAGAGGATTTGGGGAAACTTCCATATCTGAAAACAGTGGTTTTAGAAGGATTAAGAAGACACCCACCAGGGCATTTCGTGTTACCACACGCAGTGAAAGAAGACACGATATTGGAAAACTACGTGATACCAAAGAATGGGACAGTGAATTTCATGGTGGCGGAGATGGGTTGGGATCCAAAAGTGTGGGAAGATCCGATGGAGTTTAAGCCGGAGAGGTTCATGCAAGCCGGGGAAGGAGAAGAAGAAGGAACTGTATTTGATTTAACCGGGAGCAAAGAGATAAAAGATGATGCCGAGCAGGGAGGAGAATTTGTCCAGGATTTGGTCTGGCAATTCTTCATTTGGAGTATTTCATTGCGAATTTGGTATGGAGATTTGAATGGAAAGCGGTAA | 1449 | 47.76 | MEIWFIVVVSLCICSLLTSIFTHFRTSTKLPPGPPSIPIITNFLWLRRSPLQIESLLRSFITKYGPIITLPIGTRPAVFIADRSIAHKALILNGALFADRPPALPINKIASSNQHNINTAPYGPLWRLLRRNLTSQILHSSRLKSYARARKWVLDILLNRFLSHSQSGTPVCVVDHFQYAMFCLLVLMCFGDKLEESQIHEIEDVHRAMLLNFGRFSVLNFWPKLTKIFLRKRWETFLELRRKQEKVVISLIESRRKANQNRENGVENKEEFVVSYVDTLLDLELPDEDNRKLTDEEIVTICSEFLNAGTDTTSTALQWIMANLVKNPEIQNKLFAEMKELMGDGTGEEVKEEDLGKLPYLKTVVLEGLRRHPPGHFVLPHAVKEDTILENYVIPKNGTVNFMVAEMGWDPKVWEDPMEFKPERFMQAGEGEEEGTVFDLTGSKEIKDDAEQGGEFVQDLVWQFFIWSISLRIWYGDLNGKR | 482 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4098482 | 4099930 | - | Lsi10G002480.1 | Lsi10g00248 | 671805 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi10g00248 | 482 | Gene3D | Cytochrome P450 | 24 | 452 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00248 | 482 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00248 | 482 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00248 | 482 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00248 | 482 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00248 | 482 | PRINTS | E-class P450 group I signature | 403 | 427 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00248 | 482 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00248 | 482 | PANTHER | CYTOCHROME P450 | 4 | 447 | - | - | |
Lsi10g00248 | 482 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 4 | 447 | - | - | |
Lsi10g00248 | 482 | SUPERFAMILY | Cytochrome P450 | 31 | 429 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00248 | 482 | Pfam | Cytochrome P450 | 31 | 428 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi10g00248 | Lsi-Chr10:4098482 | Lsi10g00252 | Lsi-Chr10:4108716 | 3.28E-145 | dispersed | |
Lsi10g00247 | Lsi-Chr10:4091176 | Lsi10g00248 | Lsi-Chr10:4098482 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi10g00248 | K24184 | - | csv:101204559 | 737.258 |