Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi10g00250 | ATGGAGTCTCTGCTGCGAAGCTTCATCGCCAAGTACGGCCCTGTCCTCACCCTCCGCATCGGCCTCCGCCCCACCATTTTCATCGCCGATCACTCCATTGCCCACAAGGCCCTTGTCCTTAACGGCGCTCTCTTCGCCAACCGTCCACCGCCCCTTCCAGTCAGCAATGTCATCTCTAGCAATCAACACAACATCAGCTCTGCCTCTTACGGCCCACTCTGGCGCCTCCTCCGCCGCAATCTCACTTCCCAAATCCTCCATCCTTCCCGTCTCAGGTCCTACGGTCAAGCTCGCAAGTGGGTTTTGGATATTCTTCTTAATCGCCTTAAATCTGAAACCACCCTCGTCTCTGCCATCGATCATTTTCGATACGCCATGTTGTGTTTGTTGGCGTTTATGTGTTTTGGGGATAAGCTTAACGAATCCCAAATCAACGGAATCAGGAATGTGGAGCAAGCAATGCAGTTGAATATTGGTCGCTTTAACGCTCTTAATTTCTTCCCTAAATTGACCAAGATTTTGTTAAGAAAACGTTGGGAGGAGTTTCTCCAATTAAGAAGCAACCAAGAGAAAGTCCTAATTCCTTTGATCGAAGCAAGAAGGAAGATCAATCAAAACAGAGCAAACAGAGGCGAAACTGAACAAGAATTCTTGGTTTCATACGTCGATACACTACTCGATTTGGAGCTTCCCAACGAGAAAAGAAAGCTTACTGATAGCGAAATGGTCACCATAGCCTCAGAGTTTATCAACGGAGGCACCGAGACCACATCCACAGCCTTGCAGTGGATAATGGCGAATTTAGTGAAATACCCAGAAATCCAAAACAAGCTTTTTGCAGAGATGAAAGGAGTAATGGGAGATGGAACAGGGGAAGAGGTGAAGGAAGAAGATTTGGGGAAACTTCCATATCTAAAAGCTGTGGTTTTAGAAGGATTAAGAAGACACCCACCAGCCCATTTCGTGCTGCCACACGCAGTGAAAGAAGACACAATGTTGGGAAATTATGTGATACCAAAGAATGGGACTGTAAATTTCATGGTGGCGGAAATGGGTCGGGATCCGAAAGTGTGGGAAGATCCGATGGAGTTTAAGCCGGAGAGATTCATGAAAGGCGGCGAAGGAGAAGAAGGAGGAGGTGGGTTTGATATAACAGGGAGCAAAGAGATAAAGATGATGCCATTCGGAGCAGGGAGAAGAATGTGTCCTGGATTTGGTGTAGCGATTCTTCATTTGGAATATTTTGTTGCTAATTTGAGTGGAAGGCCGTCGATGGAGACGAAGTGGATCTGTCGGAGAAGGTAG | 1305 | 46.97 | MESLLRSFIAKYGPVLTLRIGLRPTIFIADHSIAHKALVLNGALFANRPPPLPVSNVISSNQHNISSASYGPLWRLLRRNLTSQILHPSRLRSYGQARKWVLDILLNRLKSETTLVSAIDHFRYAMLCLLAFMCFGDKLNESQINGIRNVEQAMQLNIGRFNALNFFPKLTKILLRKRWEEFLQLRSNQEKVLIPLIEARRKINQNRANRGETEQEFLVSYVDTLLDLELPNEKRKLTDSEMVTIASEFINGGTETTSTALQWIMANLVKYPEIQNKLFAEMKGVMGDGTGEEVKEEDLGKLPYLKAVVLEGLRRHPPAHFVLPHAVKEDTMLGNYVIPKNGTVNFMVAEMGRDPKVWEDPMEFKPERFMKGGEGEEGGGGFDITGSKEIKMMPFGAGRRMCPGFGVAILHLEYFVANLSGRPSMETKWICRRR | 434 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4102581 | 4103885 | + | Lsi10G002500.1 | Lsi10g00250 | 671807 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi10g00250 | 434 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 3 | 419 | - | - | |
Lsi10g00250 | 434 | Coils | Coil | 196 | 216 | - | - | |
Lsi10g00250 | 434 | Pfam | Cytochrome P450 | 3 | 418 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00250 | 434 | PRINTS | E-class P450 group I signature | 402 | 425 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00250 | 434 | PRINTS | E-class P450 group I signature | 261 | 287 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00250 | 434 | PRINTS | E-class P450 group I signature | 241 | 258 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00250 | 434 | PRINTS | E-class P450 group I signature | 306 | 324 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00250 | 434 | PRINTS | E-class P450 group I signature | 392 | 402 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00250 | 434 | PRINTS | E-class P450 group I signature | 125 | 143 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00250 | 434 | PRINTS | E-class P450 group I signature | 9 | 28 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00250 | 434 | PRINTS | E-class P450 group I signature | 347 | 371 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00250 | 434 | PRINTS | E-class P450 group I signature | 33 | 54 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00250 | 434 | SUPERFAMILY | Cytochrome P450 | 5 | 419 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00250 | 434 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 395 | 404 | IPR017972 | GO:0005506|GO:0016705 | |
Lsi10g00250 | 434 | PRINTS | P450 superfamily signature | 307 | 318 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00250 | 434 | PRINTS | P450 superfamily signature | 393 | 402 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00250 | 434 | PRINTS | P450 superfamily signature | 402 | 413 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00250 | 434 | PRINTS | P450 superfamily signature | 252 | 269 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi10g00250 | 434 | PANTHER | CYTOCHROME P450 | 3 | 419 | - | - | |
Lsi10g00250 | 434 | Gene3D | Cytochrome P450 | 1 | 429 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi10g00250 | Lsi-Chr10:4102581 | Lsi10g00252 | Lsi-Chr10:4108716 | 3.59E-129 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi10g00250 | K24184 | - | csv:101205049 | 691.034 |