Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi10g00311 | ATGCCTCCCAACACTCCCATTATCCTCTCTTTTCTCTTCCTAATTCTTCCCTTTTTCTTCCTTTCATCTTTTTCTGATCCTAATTATAATTATGACAATCAAAAGAATGTTTATGCTGAGCTTAGACCCGACTTTTACGACGAGTCGTGTCCCCGTTTGCCAATGATAATTCGGTATCATGTTTGGGCTGCTGTCCAAAATGACTCTAGAATTGCTGCATCGTTGTTGCGGTTGAATTTCCACGACTGCATTGTAGACGGATGTGATGCATCGGTGCTGCTTGACGATACGAAAGATATGAAAGGTGAGAAAAAAGCTCCGGGCAATGTGAATTCGCTTCGAGGATTTGAAGTGATTGATGGTATAAAAGCAGATGTAGAAACATATTGCCCACAGACAGTTTCTTGTGCTGATATTGTGAATCTTGCAGCTAGAGAAGCTGTGTATCTGGTTGGAGGACCATTTTGGCACCTTCCGCTAGGACGTAAGGATGGGTTAACTGCAAGCACAAAATCAGTTCTGGCACAGCTCCCATCTCCCAAAGCCTCTCTAGAGAACAACACCGCCAAGTTCATCTCAAAAGGCCTCGACTTAAAGGATCTCGTCGTACTTTCAGGAGCCCACACCATCGGTTTTGCCCGCTGCGTCACATTCAAAGGCCGTCTCTTCAACTACAAAGGCTCCGGTAACCCAGATCCTGACATTAACTCCGCAATGCTCTCCGATCTGCGGTCCATGTGCCCCAACAGGAACGACGGCACCAACGCCAATTTGGCGCCGCTGGATGTGGCCAGTTACGACAGATTCGACAACGAGTACTATACGAATTTGATTAGCAATGTTGGGCTTTTGGAGTCCGATCAGGGTCTGATGGCAGACCCCCAGACGGCGCGGATGGTCAGAGATTACAGTTTTGATCCGAATTTGTTCTTTGATGACTTTGCGGAGTCGATGTTTAGGATGAGCTTGGTTGGGGTTATGACCGGTCACGAAGGGCAGATTCGAAAGGAGTGTGGAGCTGTTAATAATGATGATGGCTACTGA | 1044 | 46.74 | MPPNTPIILSFLFLILPFFFLSSFSDPNYNYDNQKNVYAELRPDFYDESCPRLPMIIRYHVWAAVQNDSRIAASLLRLNFHDCIVDGCDASVLLDDTKDMKGEKKAPGNVNSLRGFEVIDGIKADVETYCPQTVSCADIVNLAAREAVYLVGGPFWHLPLGRKDGLTASTKSVLAQLPSPKASLENNTAKFISKGLDLKDLVVLSGAHTIGFARCVTFKGRLFNYKGSGNPDPDINSAMLSDLRSMCPNRNDGTNANLAPLDVASYDRFDNEYYTNLISNVGLLESDQGLMADPQTARMVRDYSFDPNLFFDDFAESMFRMSLVGVMTGHEGQIRKECGAVNNDDGY | 347 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4965744 | 4969326 | - | Lsi10G003110.1 | Lsi10g00311 | 671868 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi10g00311 | 347 | PANTHER | PEROXIDASE 10 | 31 | 341 | - | - | |
Lsi10g00311 | 347 | ProSiteProfiles | Plant heme peroxidase family profile. | 40 | 342 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi10g00311 | 347 | Pfam | Peroxidase | 59 | 304 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi10g00311 | 347 | PANTHER | PEROXIDASE 72-RELATED | 31 | 341 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi10g00311 | 347 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 200 | 210 | IPR019793 | - | |
Lsi10g00311 | 347 | PRINTS | Haem peroxidase superfamily signature | 152 | 164 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi10g00311 | 347 | PRINTS | Haem peroxidase superfamily signature | 134 | 151 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi10g00311 | 347 | PRINTS | Haem peroxidase superfamily signature | 200 | 215 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi10g00311 | 347 | PRINTS | Haem peroxidase superfamily signature | 72 | 86 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi10g00311 | 347 | PRINTS | Haem peroxidase superfamily signature | 262 | 277 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi10g00311 | 347 | ProSitePatterns | Peroxidases active site signature. | 72 | 83 | IPR019794 | GO:0004601 | |
Lsi10g00311 | 347 | Gene3D | Peroxidase, domain 2 | 178 | 321 | - | - | |
Lsi10g00311 | 347 | Gene3D | - | 44 | 342 | - | - | |
Lsi10g00311 | 347 | PRINTS | Plant peroxidase signature | 133 | 143 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi10g00311 | 347 | PRINTS | Plant peroxidase signature | 114 | 127 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi10g00311 | 347 | PRINTS | Plant peroxidase signature | 199 | 211 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi10g00311 | 347 | PRINTS | Plant peroxidase signature | 316 | 329 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi10g00311 | 347 | PRINTS | Plant peroxidase signature | 50 | 69 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi10g00311 | 347 | PRINTS | Plant peroxidase signature | 276 | 293 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi10g00311 | 347 | PRINTS | Plant peroxidase signature | 74 | 94 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi10g00311 | 347 | PRINTS | Plant peroxidase signature | 152 | 167 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi10g00311 | 347 | PRINTS | Plant peroxidase signature | 260 | 275 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi10g00311 | 347 | CDD | secretory_peroxidase | 40 | 341 | IPR033905 | GO:0004601|GO:0042744 | |
Lsi10g00311 | 347 | SUPERFAMILY | Heme-dependent peroxidases | 41 | 342 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi10g00311 | Lsi-Chr10:4965744 | Lsi01g00641 | Lsi-Chr1:5166953 | 4.19E-96 | dispersed | |
Lsi11g01605 | Lsi-Chr11:24387031 | Lsi10g00311 | Lsi-Chr10:4965744 | 3.88E-70 | dispersed | |
Lsi04g00579 | Lsi-Chr4:5295693 | Lsi10g00311 | Lsi-Chr10:4965744 | 2.29E-79 | transposed | |
Lsi01g00995 | Lsi-Chr1:8224675 | Lsi10g00311 | Lsi-Chr10:4965744 | 2.70E-131 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi10g00311 | K00430 | - | csv:101209504 | 604.749 |