Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi10g00324 ATGATGCAGGGACTTCACCACCAACAGCAGCAACTAGCAGCACTTCTCAACGTAGCTTTGCGGAAGGATGATCCTAATGCCACTACCTCGAGTTCCATTACCACTGGTGCTGCTTCCGATGAGGATGACTCTGCTAGAATTGCAGCTATCAATTCAATCCATCGTGCCATTGTTTATCCTCCCAATTCGCTTCTTGTAACTCACTCCGCCACTTTCCTCTCCCAGGGCTTCTCTCAGCTTCTATCTGATAAGTCATACCCAGTGAGACAGGCAGCAGCCATTGCATATGGAGCTCTCTGTGCCGTCTCATGTTCAATCACTGCATCACCAAATGGAAGGCAGAATAGTGTACTACTTGGGACTTTGGTTGATCGATTCATTGGTTGGGCGTTGCCATTGCTTAGCCATATCACTGCAGGTGATGCAACCACCAAGTTGGCATTGGAGGGATTGCAAGAGTTCATTAGCATTGGAGAAGCTGGTGCTGTGGAGAGATATGCTTTGCCAATCCTTAAAGCATGCCAAGTACTTCTTGAGGATGAGAGAACCCCCTTGTCTTTATTACACGGACTCTTAGGAGTTTTAACTTTGATTTCTTTGAAGTTTTCTAGATGCTTCCAACCTCATTTCCTTGATATTGTTGATCTGCTTCTAGGTTGGGCATTAGTTCCAGATCTAACCGATTCAGATAGGCACATCATTATGGACAGTTTCTTACAGTTTCAGAAGCACTGGGTGGGTAATTTGCAGTTTTCTTTGGGGTTATTGTCAAAGTTCTTGGGTGACATGGATGTATTGCTTCAAGATGGGAGTCCTGGGACGCCACAACAATTCCGTAGGTTACTTGCATTACTTTCTTGTTTTTCAACGATTCTTCGGTCTGCTGCTTCTGGGTTGTTGGAATTGAACCTTCTGGAGCAAATAAGTGAACCTCTTTCAAGAATGCTTCCCCAGTTGTTGGGATGCTTATCTATGGTTGGACGTAAATTTGGATGGTTGGAGTGGATTGAGAATTTGTGGAAGTGCTTGACTCTTTTGGCAGAAATATTACGTGAACGTTTTTCCACATTTTATCCACTTGCAATCGATATCCTATTCCAAAGTTTGGAAATGACCAGAGCTAACCATGTAATGAAAGGTCAGAAGATTATGTTTCTTCAAGTTCATGGTGTTTTGAAAACTAATCTTCAGTTAATGTCCCTTCAAAAATTTGGGCTGCTGCCATCATCTGTGCACAGAATATTGCAATTTGATGCTCCAATATCTCAGCTTAGAATGCATCCAAATCATTTGGTAACAGGTAGTTCTGCTGCCACTTATATATTCTTGCTCCAACATGGGAATAATGAAGTTGTTGAACAAACGGTGACATTATTAATTGAAGAGCTAGAAATGTTCAAGGGCTTGTTAGAAAAAGGTTTAGATAAAAGAGGTATCAATGGTATTCTTGATTCTCAATTTTATTCGAATATGGATTTGTTTGCCCTAATTAAATTTGATTTGAGAGCCTTATTGACATGTACTATCTCTAGCGGAACTATTGGTTTGATAGGCCAAGAAAAAGTTGCTTTCACATGTCTAACAAGGTCAGAAAGATTGATTTCCTTCGTTATGAAAAAACTGAATCCTTTTGACTTTCCACTACAGGCTTATGTGGAATTGCAAGCTGCTATCCTCGATACATTGGACAGGTTGACCACAATTGAATTCTTTAGCAAGTGCTCTTTGAAGAAATTGAGTAGCGAGAACCATTTTCTGGATACAGGTGAAAAAAAGATAGATGAAGCCTTTCTAAAGAAGTATTATTCAGCTATTATTATTGAGCAACTAACAAAATACAATGTGCTCTTCTCCAAAGCCCTTCATAAAGCTTCTCCACTAACAGTTAAAATAACCACCCTGGGTTGGATTCAGAGATTCTGTGAGAATGTCGTTACTATTTTTAAGAATGACCAAACATATGCTAATTTTTTTGAAGCATTTGGATATTTTGGCGTCATAGGAAACTTGATTTTCATGGTAATTGATGCTGCATCTGACAGGGAACCTAAGGTGAGATCTAATGCAGCTTCAGTATTGGAGCTGCTTCTGCAAGCAAAAATTGTTCATCCCATATACTTTTACCCCATCGCTGACATAGTCCTGGAGAAACTTGGTGATCCAGATAATGATATCAAAAACTTATTCGTGAGATTGCTTTCTCATATCTTGCCCACGGCACTTTATGCATGTGGTCAATATGACCTTGGATCATATCCTGCTTGTAGGCTCCATCTTTTGGGGTCTGATCATAAATCTAGCCTGCATTGGAAACAAGTATTTGCCTTGAAGCAGCTTCCTCAGCAAATCCATTTTCAACAACTTATTTCCATTTTGAGCTACATATCACAAAGATGGAAAGTTCCTGTTGCATCATGGACCCAGCGGCTCATCCATAGATGTGGGAGATTGAAGGACATTGATTTGAGTCAAAGGGAGGAGACAGGGAACGTAGGTGCAAATGGTTTATGGTTGGATCTCAGGCTGGATGATGATTTTCTTAATGGGAATTGCTCAGTTAATTGTGTAGCTGGAGTTTGGTGGGCCATCCATGAAGCAGCTAGATATTGTATTACTCTGCGTCTACGAACGAACCTTGGTGGGCCTACACAGACTTTCGCAGCACTAGAGCGAATGCTTTTGGACATAGCACACTTACTACAGCTTGACAATGAAAATAGTGATGGGAATTTAACAATGGTTGGGGCTTCTGGAGCCCGCTTATTGCCAATGAGGTTACTATTGGATTTTGTTGAGGCCTTAAAGAAAAATGTTTATAATGCATATGAGGGGTCTGCAGTCTTATCACCTGCTACTCGCCAAAGTTCTTTGTTTTTTCGAGCAAACAAGAAAGTCTGTGAGGAGTGGTTTTCACGTATGTGTGAGCCAATGATGAATGCTGGATTGGCACTTCAAAGCCAATATGCTGCAATCCAATATTGTACGCTGCGTTTGCAGGAGTTCAAGAATCTTGTTATGTCACATATGAAGGAAAAGTCTAATTTACAGGTCAGTGAAAACATCCACAACACAAATAAACTTACCAGAGATATCTCAAGGGTTTTGAGGCACATGACTCTGGCTCTTTGTAAAAGTCATGAAGCAGAAGCTTTGGTTGGTCTCCAGAAATGGGTTGAAATGACATTCTCTTCCCTGTTTCTGGAGGAAAACCAGAGTCTTGGCAACTTTGGTATGCTAGGACCCTTTTCATGGATTACAGGGCTAGTCTATCAGGCAAGAGGTCAATATGAAAAAGCAGCTGCTCACTTTATCCACTTATTGCAGACTGAAGAGTCACTTGCTTCTATGGGTTCTGATGGTGTACAGTTCACCATTGCTCGTATTATTGAGGGATATACAGCTATGGCTGATTGGAAATCTCTGGAATCATGGTTATTGGAGTTGCAATCTCTTCGTTCTAAACATGCTGGGAAGAGCTACTCTGGTGCTCTAACTACAGCTGGCAATGAAATAAATGCAGTCCATGCATTGGCACACTTTGATGAAGGAGATTATCAGGCATCTTGGGCATGTCTTGGTTTGACACCTAAGAGTAGCAGTGAGTTAACTCTAGATCCCAAGCTGGCTTTGCAGAGGAGTGAGCAGATGCTTTTACAGGCATTGCTTTTCCATAATGAGGGAAGGATGGAACAGGTGTCCCAAGAAATCCAGAAGGCAAGGGCAATGCTGGAGGAAACGTTGTCAGTCTTGCCTCTGGATGGCTTGGAAGAAGCAGCTGCATTTGCTACACAATTACATAGCATTTCTGCCTTTGAAGAAGGTTACAAGCTTACAGGCAGTGCAAACAAACATGAAAAGTTAAATTCAATATTGAGTGTCTATGTCCAGTCGGTGCAATCTTCTTTCTGTAGAACTAATCAAGATTGCAACCCATGGTTAAAAGTTCTTCGGGTTTATCGAGTGATCTCACCAACTTCTCCAGTCACACTTAAACTCTGTATTAATTTGTTAAGTTTGGCTCGTAAACAGGAAAACCTGATGTTGGCGAATAATTTAAACAATTATATTCACGATCATATATCAAATAGTTCCGATGAAAGGCATTGCCAATTTCTCCTCTCAAGTTTGCAGTATGAGAGAATCTTGTTAATGCAAGCTGACAACAAGTTTGAAGATGCTTTCACAAATATTTGGTCCTTTGTGCATCCTCACATCATTTCTTTCAACTCAGTTGAGTCAAACTTTGATGATGGTATTCTGAAAGCAAAAGCATGCTTAAAACTTTCTCGCTGGTTAAAACAGGATTTAGAAGCTCTGAACTTGGATAATTTTATACCTAAGCTGATTGCTGAGTTTAATGTCACAGATAAATCCTCTGGCAGAGGTGAGTTCTCCATCTGTAATGAGAATTTACACTCTGGACCAAGTATAGAACTTATCATTGAGGAGATTGTGGGTACGATGACTAAATTGTCCACTCGTCTTTGTCCTACATTTGGCAAGGCATGGATTTCTTATGCATCTTGGTGCTTTACTCAAGCTGAAAGTTCTCTCCATGCTTCATGTGGAACTGCTCTCCGCTCATGCTTGTTTTCTTCTATACTAGATCCTGAAGTTCTTTCTGAGAAATATAGATTAACTAAAGATGAAATCATAAGAGTGGAACGTCTGATTTATTTTCTTGTTCAGAAAGGTCATGCAGCAAAAAGAGTTAATGATGAGCGAAGAGAATGGAGTTCTGACACCTCAGAGGATTTGAAACTTGATGGCACCGTCAAGGCCTTGTTGCAGCAAGTAATAAATATCATTGAGGCTGCAGCTGGGTTGTCAAATACTGAAAACCCTGGGAATGAATGCCTAACTGATGTCTTTACTTCCCAGTTAAAGTTATTTTTTCAGCATGCCATTATTGACCTAGATGACACTAGCGCAGAACCCATTATTCAGGACTTGGTAGATGTTTGGAGGTCCTTGAGGAGTAGAAGAGTGTCTCTCTTTGGTCATGCTGCTCACGGCTTTATACAATATCTTTTGCATTCATCTATAAAAGCGTGTGATGGTCAGCTGATGGGCTATGACTGTCAATCAATGAAACAGAACTCTGGAAAATACACACTGAGGGCCACATTGTACGTCCTACATATTCTTCTCAATTATGGAGCCGAGTTAAAGGATTCTCTTGAACCTGCTCTATCAACAGTCCCACTCTCTCCATGGCAGGAAGTGACACCACAGTTATTTGCTCGCCTGAGTTCTCATCCTGAGAAAATTGTGAGGAAGCAGTTGGAGGGATTGGTGATGATGCTGGCTAAGCAGTCTCCGTGGTCTGTAGTATACCCAACACTTGTTGATGTAAATTCTTATGAAGAGAAGCCTTCGGAGGAGCTTCAACATATACTTGGTTCTTTGAAAGAGCATTATCCAAAATTGATTGAAGATGTTCAATTGATGATAAAAGAGCTGGAAAATGTAACTGTACTTTGGGAAGAGCTATGGCTCAGCACACTTCAAGATCTTCAGACAGATGTCATGAGACGCATAAATGTACTCAAGGAAGAAGCTGCTCGAATTGCTGCAAATGTCACCCTCAGCCAGAGTGAGAAAGACAAGATAAATTCTGCCAAGTACTCAGCCATGATGGCCCCCATTGTAGTGGCTTTGGAGCGTCGTTTGGCTTCAACATCTCGAAAACCTGAAACGCCCCATGAAACCTGGTTTCATGAAGAGTATAAAGAACAGCTGAAATCAGCTATTTTTACCTTCAAGAATCCTCCAGCCTCTGCTGCTGCACTTGTTGATGTATGGCGGCCATTTGATGATATTGCAGCATCTTTGGCATCTTATCAGAGAAAGTCATCAATTTCTTTAAAAGAAGTTGCACCTAAGTTAACTTTGTTATCATCATCTGACGTACCAATGCCTGGTTTTGAGAAGAATGTTATATATTCAGAATCTGATAGAAGCATTGGCTCTAATCTTTCAGGAACCGTTACAATTGGTTCTTTCTCAGAGCAAGTTACTATCTTGTCCACAAAGACAAAACCTAAAAAGCTTGTAATACTGGGTTCTGATGGTGAAACCTACACATATCTCTTAAAAGGTAGAGAGGATCTGCGACTTGATGCTAGAATCATGCAAATGCTGCAAGCTATCAATAGTTTTTTGTATTCGTCTCATTCAACATATGGTCAATCTCTCTCCATTCGCTATTATTCTGTAACTCCAATTAGTGGTAGAGCTGGTCTCATCCAATGGGTAAACAATGTGATGAGTGTATATACTGTATTCAAGTCATGGCAACACCGTGTCCAGGTGGCACAACTCTCAGCAGTTGGTGCTAGCAATTTGAAAAGTTCTGTTCCTCCACAGCTTCCACGTCCGAGCGATATGTTTTATGGTAAAATCATACCGGCACTCAAAGAGAAAGGCATAAGGAGAGTGATTTCACGTAGAGATTGGCCCCATGAAGTCAAACGTAAAGTTCTTTTGGATCTTATGAAGGAGGTTCCGAGACAACTTCTTTATCAAGAACTCTGGTATGCTGGAAGTGTCGCAGCAATGAGTATGGTGGGACACATCTTGGGCTTAGGCGATAGACATCTGGATAATATTCTTATGGATTTCTCTACTGGAGATGTTGTACATATTGACTATAATGTTTGTTTTGATAAAGGGCAGAAACTGAAAGTTCCAGAGATTGTTCCCTTTCGTCTCACCCAAACTATGGAAGCAGCTTTAGGACTGACAGGAATAGAAGGGACCTTCAGAGCAAACTGTGAGGCTGTGCTAGAAGTTCTGAGAAAGAACAAAGATATACTCCTAATGCTGCTAGAAGTTTTTGTGTGGGATCCTCTTGTGGAATGGACACGTGGTGATTTCCATGATGATGCCACTATAGGTGGTGAAGAAAGAAGAGGCATGGAGCTGGCTGTTAGCTTGAGTTTATTTGCATCTCGTGTGCAGGAAATTCGTGTCCCCTTGCAGGAGCATCATGATCTTTTATTGGCTGCCCTACCTGCTGCTGAGTCTTCTCTTGAGGGGTTTGCGAATGTCCTAAATCACTATGAGCTTGCCTCTACGCTCTTTTATCAAGCTGAACAAGAAAGATCAAACATAGTTTTGCGTGAAACATCAGCCAAGTCAGTTGTTGCTGATGCAACATCTAATGCAGAGAAAGTTCGTACACTATTTGAGATGCAGGCTCGAGAGCTTGCTCAAGGTAAGGCTATTGTTTCTGAGAAAGCTCAAGAGGCATCAACCTGGATTGAGCAACATGGAAGAATCCTTGATAATTTAAGGAGCAATATGATTCCAGAAGTAGACACTTGTTTGAATCTGAGAGCAGTTGGAGAAGCTTTGTCACTTATAGCTGCCGTTACGGTGGCTGGAGTTCCATTGACAGTTGTTCCTGAGCCCACACAAGTGCAATGCCATGATATAGATAGGGAGATTTCTCAGCTTATAGCTGCACTAAGCGATGGACTTTCTTCTGCTATAACTACAATTCAAGTTTATTCTGTTTCTTTGCAGAGATTTCTTCCTCTAAACTATGTAACAACTAGTGTAGTTCATGGCTGGGCTCAGGCTTTACAATTATCTAAGAATGCCCTCTCCTCCGATATTATTTCACTCGCTAGAAGACAGGCTACTGAACTTATGATGAAAGTAAACGATAATAATTTTGATTCTGTACAAGTCAGTCATGACAATATGTGTGTTCAAGTGGAGAAGTACGCTAAGGAAATTGCAAAAATTGAAGAAGAGTGTACTGAGCTCATGACCTCTATTGGTACAGAAACTGAATTGAAAGCTAAGGATCGCCTTCTATCAACTTTTATGAAATATATAGCGGCTGCTGGCCTTGTAAGGAGAGAAGCTATTCCATCTCTCCAGATGGGACGACTTACACATGATGGGAAAAAGGACATCAACATGCAGGTTGAGCTTGTGGCAGAAAAGGAGAAAAAGGAAAAGCTACTATCTAGTATTAACGTTGCTCTGGATATTTTATATTGTGAGGCAAGGGGAAAATTACTGGACATTTTTAGTGATAAGAATGATGGGATACTAGTGAATAAAACTCCATCTCATGATTTTAATGTTGTTTTCTCCAATCTAGAAGAGCAAGTGGAGAAATGTGTGCTTTTGTCAGAGTTCCATACTGAATTACTGGACTCGATTGATGATAAGGTGCTGAGCATTGAAAACAAAAATAAAAATTGGCATAGGAATCATTCTCATAGAAATTGGACTTCCACTTTTACTGTCATGTTGTCTTCTTTCAAAGATCTGATAGGGAAAATGACTGAGGCTGTTCTACCTGATATAATTAGATCTGCTATTTCGGTGAATTCAGAAGTTATGGATGCATTTGGACTGGTCTCACAAATTCGGGGTTCAATTGATACAGCTCTAGAACAGTTTCTGGAGGTTCAATTAGAGAAGTCTTCGTTAATTGAATTGGAAAAAAATTATTTTATCAATGTTGGCCTCATTACAGAGCAGCAGCTGGCTCTTGAGGAAGCTGCTGTAAAGGGCAGGGATCATCTCTCTTGGGAGGAGGCCGAGGAGCTTGCTTCAGAGGAGGAAGCTTGCAGGGCAGAACTGCATCAACTCCATCAAACATGGAACCAGAGAGATGTACGTAGCTCGTCTCTTGCAAAGAGGGAAGCTAATTTAGTACATGCATTGGCTTCATCAGAATGCCAATTTCAATCTCTTATCAGTGCTGCAGTGGAGAAGGAGGCTTTTACAAAAGGCAACACCTTATTGGCCAAATTAGTTAAACCATTCTCTGAACTGGAATCTATTGATGAACTCTGGTCTTCCTCTGGAATTTCCTTTGCATCTATCTCAAATGGGATTCCTACATTGTCAGATATGGTGAGTTCTGGGTACCCAATATCTGAATATATTTGGAGGTTTGGTGGCCTGTTGAGCAGTCATTCTTTCTTTATTTGGAAAATTTGTGTCGTGGATTCTTTCCTCGATTCATGCATACATGAAATTGCTTCAGCCGTGGATCAAAATTTTGGATTTGATCAGCTCTTTAATGTTATGAAGAAGAAACTTGAGCTTCAGCTTCAAGAATATATTTTTAGATACCTTAAAGAACGGGGTGTTCCTGCATTATTGGCTTGGCTAGATAAAGAAAGGGAACATTTAAAGCCACTGGAGGCAAGAAAAGACAATTTCCGTGAACACCATGATGAACAAATTAAAGATTTTGAATTTATTGAGAGGATCCGATACATGCTTCAGGAACATTGCAATGTACATGAAACTGCCAGAGCAGCAAGGTCTGCAGCTTCACTTATGAGAAGGCAGATGAATGATCTCAAAGAAACTCTTCAAAAGACTAGTCTGGAAATTATTCAAATGGAGTGGTTACATGACATCAGTTTGACTCCATCACAATTTAATCGGGCCACCTTGCAAAAATTTCTCTCTGTTGAGGATAGGTTATACCCTATTATTCTAGACCTTAGCCGATCTGAATTGCTGGGAAGTTTGCAATCAGCTGCTTCAAAGATAGCCAAGTCAATTGAAGGCCTAGAAGCTTGTGAGCGAGGCTCTCTTACAGCTGAAGCACAGCTGGAGAGAGCAATGGGGTGGGCTTGTGGTGGCCCAAATACTGGTCCGGTGATAAATACTTCTAAAGCTTCAGGGATTCCTCCTCAATTCCATGACCATATCTTGAGGCGGAGGCAGTTGTTATGGGAAACTAGAGAAAAGGTATCAGATATTATTAAGATTTGCATGTCTATATTGGAATTTGAAGCATCAAGAGATGGCATGCTTCAATTTCCAGGGGATCATGCTTTTAGTACAGACGGCGATAGCAGGGCATGGCAGCAAGCTTACTTGAACGCAATAACAAGACTGGATGTTTCTTATCACTCCTTTGCCCGTGAGCAAGCTTTTCTCTTTTATGTTGATGTTGTCTCATTGCACTATTCAAGCCCTTTTGGTACTGAACAAGAATGGAAGCTTGCAGAAAGAAGCATGGAGGCTGCCTCAAACGAATTATACTCTGCAACCAATAGTCTTCGCATTGCCTCTCTTAAAGTGAAGTCTGCTTCAGGTGATTTACAAAGCACTCTTCTCAGTATGAGAGATTGTGCATATGAATCAAGTGTTGCACTCTCAGCATTTGGTAGTGTCTCAAGGAACCACACTGCTTTGACCTCTGAGTGTGGTTCCATGCTTGAAGAGGTACTAGCAATAACAGAAGATCTGCACGATGTTCATAATTTGGGAAAGGAGGCTGCTGTAATTCACCGTCGACTTATTGAAGACATTGCAAAGGCAAATTCAGTCCTCCTTCCCCTTGAGGCAATGTTGTCCAAGGATGTTGCTGCCATGATTGATGCTATGGCAAGAGAAAGAGAGATCAAGATGGAAATATCACCTATACATGGACAAGCTATATATCAGTCCTATTGTTTGAGAATTAGGGAGGCCTGTCAGATGTTCAAGCCTTTGGTTCCTTCTCTTACATTGTCTGTGAAGGGTCTGTATTCCATGTTTACCAAGCTTGCACGAACCGCAAGTCTCCATGCTGGAAATCTTCATAAAGCTCTTGAAGGACTAGGAGAAAGCCAGGAAATAAAGTCAGAGGGAATTCACATAACTAGGTCTCAGTTCAATAGTGAAGTGGATGCAGTTGACTTCGAAAAGGAGAGAGAGAGCCTCTCCTTGTCTGATAGTGGGAGTAGCAGAGATATCCCTGATATTACCAGACTTTCTTTGCAAGATAAAGAATGGTTATCTCCACCTGGTAGTTTCTGCAGCAGCAGCTCTGGGTCTGGCATCACCACTGGTAGCTTTCCAGATAGCTCCAATGACCTAACAGAGGATATGGGTCCAAATTATAATGGTTCTAGTAACAGAGAAGCTATAGTTTATCCAAAAATTACCTCATTTTCTCAAACTGACATTGGAAAAATTTTACGTTTAGAGGAGTCAGAATCAAAATCCACAGATGGCAGCGAAACCTGTTTTAGGAAGTTATCAACCCATGAGTTGAATGGGGGAATACAAATTGTTGCAACACCAGCTGACGAATCTATTGAAGTTCCTGCTATTGCATCATATTCATTGACTGAGAATGTTGAAAAGCTGGGGGAGGAAAGTGGTGTAACCTCATCAGATAAGAGATTAGAAGATGAAAATCAAGAGGCTCCCCCAGCTCAGAAGGCTGCTTGGAGTCGTGCAAGCAGGGGTAAGAGATTTTTCAATCATCAACTGTATGAGATAAGATATTACTTGTCAGGCAGTGTCAGTAATGAAAGAGGATTGAACCCTCCTTCAGAAGTCTTGAAAGGCTTCATAGTTCAATTTCCAGAGAATAAACCCCTTAATTCAAAAAGCAAGAGTAGAAATGCATATGCAATGTCTGTTTTACGGCGTGTTGAGATGAAACTCAATGGACTAGACCATGTTGATAACAGAGAACTTAGCATTACTGAGCAAGTGGATTATCTACTTAAGCAAGCAACGAGTGTAGACAATCTGTGCAACATGTATGAAGGATCCTTCTTCCCATTTCCATCTTTGAGCTGTGCATGTGAACCATCGAGGAAGCTTCCGAAGAGTGTTGAACATTCTTCACGTTCCAATATGCTGCCCCACGCAAGGCAGAGGGCAGGTAATATGGGATACCACAGGGGCTTCGAAGTTATTTGA 11688 41.05 MMQGLHHQQQQLAALLNVALRKDDPNATTSSSITTGAASDEDDSARIAAINSIHRAIVYPPNSLLVTHSATFLSQGFSQLLSDKSYPVRQAAAIAYGALCAVSCSITASPNGRQNSVLLGTLVDRFIGWALPLLSHITAGDATTKLALEGLQEFISIGEAGAVERYALPILKACQVLLEDERTPLSLLHGLLGVLTLISLKFSRCFQPHFLDIVDLLLGWALVPDLTDSDRHIIMDSFLQFQKHWVGNLQFSLGLLSKFLGDMDVLLQDGSPGTPQQFRRLLALLSCFSTILRSAASGLLELNLLEQISEPLSRMLPQLLGCLSMVGRKFGWLEWIENLWKCLTLLAEILRERFSTFYPLAIDILFQSLEMTRANHVMKGQKIMFLQVHGVLKTNLQLMSLQKFGLLPSSVHRILQFDAPISQLRMHPNHLVTGSSAATYIFLLQHGNNEVVEQTVTLLIEELEMFKGLLEKGLDKRGINGILDSQFYSNMDLFALIKFDLRALLTCTISSGTIGLIGQEKVAFTCLTRSERLISFVMKKLNPFDFPLQAYVELQAAILDTLDRLTTIEFFSKCSLKKLSSENHFLDTGEKKIDEAFLKKYYSAIIIEQLTKYNVLFSKALHKASPLTVKITTLGWIQRFCENVVTIFKNDQTYANFFEAFGYFGVIGNLIFMVIDAASDREPKVRSNAASVLELLLQAKIVHPIYFYPIADIVLEKLGDPDNDIKNLFVRLLSHILPTALYACGQYDLGSYPACRLHLLGSDHKSSLHWKQVFALKQLPQQIHFQQLISILSYISQRWKVPVASWTQRLIHRCGRLKDIDLSQREETGNVGANGLWLDLRLDDDFLNGNCSVNCVAGVWWAIHEAARYCITLRLRTNLGGPTQTFAALERMLLDIAHLLQLDNENSDGNLTMVGASGARLLPMRLLLDFVEALKKNVYNAYEGSAVLSPATRQSSLFFRANKKVCEEWFSRMCEPMMNAGLALQSQYAAIQYCTLRLQEFKNLVMSHMKEKSNLQVSENIHNTNKLTRDISRVLRHMTLALCKSHEAEALVGLQKWVEMTFSSLFLEENQSLGNFGMLGPFSWITGLVYQARGQYEKAAAHFIHLLQTEESLASMGSDGVQFTIARIIEGYTAMADWKSLESWLLELQSLRSKHAGKSYSGALTTAGNEINAVHALAHFDEGDYQASWACLGLTPKSSSELTLDPKLALQRSEQMLLQALLFHNEGRMEQVSQEIQKARAMLEETLSVLPLDGLEEAAAFATQLHSISAFEEGYKLTGSANKHEKLNSILSVYVQSVQSSFCRTNQDCNPWLKVLRVYRVISPTSPVTLKLCINLLSLARKQENLMLANNLNNYIHDHISNSSDERHCQFLLSSLQYERILLMQADNKFEDAFTNIWSFVHPHIISFNSVESNFDDGILKAKACLKLSRWLKQDLEALNLDNFIPKLIAEFNVTDKSSGRGEFSICNENLHSGPSIELIIEEIVGTMTKLSTRLCPTFGKAWISYASWCFTQAESSLHASCGTALRSCLFSSILDPEVLSEKYRLTKDEIIRVERLIYFLVQKGHAAKRVNDERREWSSDTSEDLKLDGTVKALLQQVINIIEAAAGLSNTENPGNECLTDVFTSQLKLFFQHAIIDLDDTSAEPIIQDLVDVWRSLRSRRVSLFGHAAHGFIQYLLHSSIKACDGQLMGYDCQSMKQNSGKYTLRATLYVLHILLNYGAELKDSLEPALSTVPLSPWQEVTPQLFARLSSHPEKIVRKQLEGLVMMLAKQSPWSVVYPTLVDVNSYEEKPSEELQHILGSLKEHYPKLIEDVQLMIKELENVTVLWEELWLSTLQDLQTDVMRRINVLKEEAARIAANVTLSQSEKDKINSAKYSAMMAPIVVALERRLASTSRKPETPHETWFHEEYKEQLKSAIFTFKNPPASAAALVDVWRPFDDIAASLASYQRKSSISLKEVAPKLTLLSSSDVPMPGFEKNVIYSESDRSIGSNLSGTVTIGSFSEQVTILSTKTKPKKLVILGSDGETYTYLLKGREDLRLDARIMQMLQAINSFLYSSHSTYGQSLSIRYYSVTPISGRAGLIQWVNNVMSVYTVFKSWQHRVQVAQLSAVGASNLKSSVPPQLPRPSDMFYGKIIPALKEKGIRRVISRRDWPHEVKRKVLLDLMKEVPRQLLYQELWYAGSVAAMSMVGHILGLGDRHLDNILMDFSTGDVVHIDYNVCFDKGQKLKVPEIVPFRLTQTMEAALGLTGIEGTFRANCEAVLEVLRKNKDILLMLLEVFVWDPLVEWTRGDFHDDATIGGEERRGMELAVSLSLFASRVQEIRVPLQEHHDLLLAALPAAESSLEGFANVLNHYELASTLFYQAEQERSNIVLRETSAKSVVADATSNAEKVRTLFEMQARELAQGKAIVSEKAQEASTWIEQHGRILDNLRSNMIPEVDTCLNLRAVGEALSLIAAVTVAGVPLTVVPEPTQVQCHDIDREISQLIAALSDGLSSAITTIQVYSVSLQRFLPLNYVTTSVVHGWAQALQLSKNALSSDIISLARRQATELMMKVNDNNFDSVQVSHDNMCVQVEKYAKEIAKIEEECTELMTSIGTETELKAKDRLLSTFMKYIAAAGLVRREAIPSLQMGRLTHDGKKDINMQVELVAEKEKKEKLLSSINVALDILYCEARGKLLDIFSDKNDGILVNKTPSHDFNVVFSNLEEQVEKCVLLSEFHTELLDSIDDKVLSIENKNKNWHRNHSHRNWTSTFTVMLSSFKDLIGKMTEAVLPDIIRSAISVNSEVMDAFGLVSQIRGSIDTALEQFLEVQLEKSSLIELEKNYFINVGLITEQQLALEEAAVKGRDHLSWEEAEELASEEEACRAELHQLHQTWNQRDVRSSSLAKREANLVHALASSECQFQSLISAAVEKEAFTKGNTLLAKLVKPFSELESIDELWSSSGISFASISNGIPTLSDMVSSGYPISEYIWRFGGLLSSHSFFIWKICVVDSFLDSCIHEIASAVDQNFGFDQLFNVMKKKLELQLQEYIFRYLKERGVPALLAWLDKEREHLKPLEARKDNFREHHDEQIKDFEFIERIRYMLQEHCNVHETARAARSAASLMRRQMNDLKETLQKTSLEIIQMEWLHDISLTPSQFNRATLQKFLSVEDRLYPIILDLSRSELLGSLQSAASKIAKSIEGLEACERGSLTAEAQLERAMGWACGGPNTGPVINTSKASGIPPQFHDHILRRRQLLWETREKVSDIIKICMSILEFEASRDGMLQFPGDHAFSTDGDSRAWQQAYLNAITRLDVSYHSFAREQAFLFYVDVVSLHYSSPFGTEQEWKLAERSMEAASNELYSATNSLRIASLKVKSASGDLQSTLLSMRDCAYESSVALSAFGSVSRNHTALTSECGSMLEEVLAITEDLHDVHNLGKEAAVIHRRLIEDIAKANSVLLPLEAMLSKDVAAMIDAMAREREIKMEISPIHGQAIYQSYCLRIREACQMFKPLVPSLTLSVKGLYSMFTKLARTASLHAGNLHKALEGLGESQEIKSEGIHITRSQFNSEVDAVDFEKERESLSLSDSGSSRDIPDITRLSLQDKEWLSPPGSFCSSSSGSGITTGSFPDSSNDLTEDMGPNYNGSSNREAIVYPKITSFSQTDIGKILRLEESESKSTDGSETCFRKLSTHELNGGIQIVATPADESIEVPAIASYSLTENVEKLGEESGVTSSDKRLEDENQEAPPAQKAAWSRASRGKRFFNHQLYEIRYYLSGSVSNERGLNPPSEVLKGFIVQFPENKPLNSKSKSRNAYAMSVLRRVEMKLNGLDHVDNRELSITEQVDYLLKQATSVDNLCNMYEGSFFPFPSLSCACEPSRKLPKSVEHSSRSNMLPHARQRAGNMGYHRGFEVI 3895
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5191047 5214720 + Lsi10G003240.1 Lsi10g00324 671881

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi10g00324 3895 PANTHER OS03G0738200 PROTEIN 54 3845 - -
Lsi10g00324 3895 Gene3D - 1942 2086 - -
Lsi10g00324 3895 SMART Rapamycin_bind_3 1820 1941 - -
Lsi10g00324 3895 MobiDBLite consensus disorder prediction 3708 3736 - -
Lsi10g00324 3895 SMART FATC_2 3818 3848 IPR003152 GO:0005515
Lsi10g00324 3895 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 2183 2203 IPR018936 GO:0016301
Lsi10g00324 3895 PANTHER ATAXIA TELANGIECTASIA MUTATED ATM -RELATED 54 3845 - -
Lsi10g00324 3895 SUPERFAMILY ARM repeat 36 800 IPR016024 -
Lsi10g00324 3895 Pfam Phosphatidylinositol 3- and 4-kinase 2028 2289 IPR000403 -
Lsi10g00324 3895 Coils Coil 3103 3123 - -
Lsi10g00324 3895 SMART pi3k_hr1_6 2029 2351 IPR000403 -
Lsi10g00324 3895 SUPERFAMILY Protein kinase-like (PK-like) 1966 2292 IPR011009 -
Lsi10g00324 3895 Coils Coil 1229 1249 - -
Lsi10g00324 3895 Coils Coil 2568 2595 - -
Lsi10g00324 3895 MobiDBLite consensus disorder prediction 3712 3727 - -
Lsi10g00324 3895 ProSiteProfiles FATC domain profile. 3818 3848 IPR003152 GO:0005515
Lsi10g00324 3895 CDD PIKKc_SMG1 1999 2290 IPR039414 GO:0000184|GO:0004674
Lsi10g00324 3895 Pfam Serine/threonine-protein kinase smg-1 616 1184 IPR031559 GO:0000184|GO:0004674|GO:0016310
Lsi10g00324 3895 Pfam FATC domain 3820 3845 IPR003152 GO:0005515
Lsi10g00324 3895 Gene3D - 2166 2312 IPR036940 GO:0016301
Lsi10g00324 3895 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 2002 2328 IPR000403 -
Lsi10g00324 3895 MobiDBLite consensus disorder prediction 3595 3624 - -
Lsi10g00324 3895 ProSiteProfiles FAT domain profile. 1163 1787 IPR014009 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi10g00324 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] - csv:101222679 6804.54
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi03g00601 Lsi-Chr3:7471777 Lsi10g00324 Lsi-Chr10:5191047 7.48E-46 dispersed
Lsi10g00324 Lsi-Chr10:5191047 Lsi11g01223 Lsi-Chr11:20816695 3.43E-45 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g525 . . . . . . . . . . . Cma20g00881 . Car20g00759 . . . . . . . . . . . . . . . . . . . . . Lsi10g00324 . Chy11g00422 . . . . . . . . . . . Cmo20g00889 . . . . . . Bhi10g02063 . . . Hepe08g1050 . . Cla09g01732 Cam09g1827 Cec09g1887 Cco09g1980 . . Cre01g0682 . Csa02g01213 . Cme11g00489
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011498 0 3 0 0 0 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 2 1 1 1 1 1 30
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi10g00324 Lsi_Chr10 FPKM 31.977598 33.396641 9.792857 9.169366 3.735667 4.212522 3.861181 30.386997 27.452621 27.378204