Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi10g00488 | ATGGCCGCTTTTCTCTCCATTTCTCTTTCCCCTTTCTTCTTCCTTCTTCTCTTAATCCTTATCTCTACAGTTTCAGCCGATTCTCCATTGAAGACCTTCATCTTCCGTGTCGACCGTTTCTCTAAGCCCTCTGTTTTTCCTACCCATTACCACTGGTACACTTCCGAGTTCGCCGAATCCCCCAAAATCCTCCATGTTTACGACACCGTCTTCCATGGATTCTCTGCAACTTTAACTCAAGACCAAGTCGATACCATCGGAAAACACCCTTCTGTGCTCGCTGTTTTCGAGGACCGTCGTCGTCAGCTTCACACCACCCGTTCCCCTCAATTTCTCGGCCTTCGAAACCAGCGTGGTCTATGGTCTGATTCCGATTACGGCTCCGATGTAATCATTGGAGTTTTCGATACTGGGATTTCCCCTGAACGACGAAGCTTCTCCGATGTGAATTTGGGGCCGATTCCTCGCCGGTGGAAGGGGGTTTGTGAGACTGGAACTAAGTTCACGGCCAAAAACTGTAACAGGAAGATCGTGGGTGCGAGGTTTTTCTCTAAGGGTCACGAAGCAGGGTCCAACGCTGCCGGTCCCATTATTGGGATAAACGACACGATTGAGTACAGATCTCCGAGAGACGCTGATGGCCATGGGACTCATACGGCGTCGACGGCGGCCGGACGGCACGCGTTTCAGGCTAGTTTGGAGGGTTATGCTTCTGGAATAGCAAAGGGTGTGGCCCCTAAGGCGCGTTTGGCGGTTTACAAGGTTTGTTGGAAAAACTCGGGTTGTTTTGATTCCGATATTCTCGCGGCATTTGATGTTGCGGTTAACGACGGCGTCGATGTCATTTCGATCTCAATTGGAGGCGGCGATGGCGTTTCCTCACCGTATTATCTTGACCCAATTGCAATCGGAGCGTACGGCGCCGCTTCCAGGGGTGTTTTCGTTTCGTCTTCGGCTGGGAACGATGGACCCAATGGAATGTCAGTGACGAACTTGGCCCCGTGGGTTACGACGGTTGGAGCAGGTACGATTGACCGGAATTTCCCGGCGGTGGTAACTCTGGGAAACGGACGGAAGATTTCCGGGGTATCTCTCTACGCTGGAGCGCCGTTGAACGGTACAATGTATCCATTAGTTTACCCTGGAAAATCAGGGGTGCTCTCTGTTTCGCTCTGTATGGAAAATTCACTCGACCCTAAGGCTGTGGCCGGAAAAATTGTGATCTGCGACAGGGGAAGTAGTCCCAGAGTGGCTAAGGGTTTGGTCGTGAAGAAGGCCGGCGGCGTCGGAATGATTCTAGCAAACGGAATCTCAAACGGCGAAGGACTCGTCGGCGATGCCCATCTTCTTCCCGCCTGCGCAGTCGGCTCCGACGAAGGCGATGCCATGAAAGCCTACGCATCGTCCTCTCCAAATCCCACCGCCACCATCGCCTTCCAAGGCACTATAATCGGAATCAAACCGGCGCCAGTTGTGGCTTCGTTTTCCGCAAGAGGGCCAAACGGACTAAACCCAGAAATTCTAAAACCAGACTTAATCGCACCAGGGGTTAACATTCTTGCCGCCTGGACCGACGCCGTCGGTCCAACCGGTTTGGACTTCGATACACGAAAAACAGAGTTCAACATCTTGTCCGGTACATCAATGGCGTGTCCCCATGTAAGTGGAGCCGCTGCTCTATTGAAATCAGCTCACCCAGATTGGAGTCCAGCAGCGTTAAGATCCGCCATGATGACCACCGCAAGTATCACCGACAACCGCCGGCAACCAATGACGGAAGAATCCACCGGAAAAGCTTCTACCCCTTACGATTTCGGTGCCGGACATGTAAATTTGGGGCTTGCAATGGACCCAGGTCTAGTTTACGACATTACAAACACCGATTACATAAACTTCTTATGCTCAATCGGGTACGGACCGAAGATGATTCAGGTAATAACAAGAACACCGGTGACATGTCCAGCGAAAAAACCATTACCGGAAAATCTCAATTACCCATCAATCGTAGCAGTATTTTCAAGTCTATCAAAAGGGTGGTCGACAAAGTCGTTTATCCGAACAGCGACGAACGTGGGTCCAGCAAATTCAGTGTACAGAGCCAAAATCGAAGCTCCAAAAGGGGTTACAGTGAAGGTAAAACCATCAAAACTGGTATTCTCAGCAACGGTGAAGAAACAGAGCTTCGTAGTGGCAATATCAGCCGACAATCAGAATCTGGCACTGGGCGATGTGGGCGCTGTTTTTGGTTGGCTTTCTTGGTCTGATGGAAAACATGTGGTCCGTAGCCCACTGGTAGTGACTCAATTAGAGCCTTTGTAA | 2319 | 50.88 | MAAFLSISLSPFFFLLLLILISTVSADSPLKTFIFRVDRFSKPSVFPTHYHWYTSEFAESPKILHVYDTVFHGFSATLTQDQVDTIGKHPSVLAVFEDRRRQLHTTRSPQFLGLRNQRGLWSDSDYGSDVIIGVFDTGISPERRSFSDVNLGPIPRRWKGVCETGTKFTAKNCNRKIVGARFFSKGHEAGSNAAGPIIGINDTIEYRSPRDADGHGTHTASTAAGRHAFQASLEGYASGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDVAVNDGVDVISISIGGGDGVSSPYYLDPIAIGAYGAASRGVFVSSSAGNDGPNGMSVTNLAPWVTTVGAGTIDRNFPAVVTLGNGRKISGVSLYAGAPLNGTMYPLVYPGKSGVLSVSLCMENSLDPKAVAGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACAVGSDEGDAMKAYASSSPNPTATIAFQGTIIGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTDAVGPTGLDFDTRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAALRSAMMTTASITDNRRQPMTEESTGKASTPYDFGAGHVNLGLAMDPGLVYDITNTDYINFLCSIGYGPKMIQVITRTPVTCPAKKPLPENLNYPSIVAVFSSLSKGWSTKSFIRTATNVGPANSVYRAKIEAPKGVTVKVKPSKLVFSATVKKQSFVVAISADNQNLALGDVGAVFGWLSWSDGKHVVRSPLVVTQLEPL | 772 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 7018143 | 7020461 | + | Lsi10G004880.1 | Lsi10g00488 | 672045 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi10g00488 | 772 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 21 | 766 | IPR045051 | - | |
Lsi10g00488 | 772 | SUPERFAMILY | Subtilisin-like | 103 | 620 | IPR036852 | GO:0004252|GO:0006508 | |
Lsi10g00488 | 772 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT1.7 | 21 | 766 | - | - | |
Lsi10g00488 | 772 | SUPERFAMILY | Protease propeptides/inhibitors | 57 | 100 | - | - | |
Lsi10g00488 | 772 | CDD | Peptidases_S8_3 | 102 | 582 | IPR034197 | - | |
Lsi10g00488 | 772 | Pfam | PA domain | 376 | 462 | IPR003137 | - | |
Lsi10g00488 | 772 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 21 | 104 | IPR037045 | - | |
Lsi10g00488 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 127 | 146 | IPR015500 | - | |
Lsi10g00488 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 211 | 224 | IPR015500 | - | |
Lsi10g00488 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 545 | 561 | IPR015500 | - | |
Lsi10g00488 | 772 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 102 | 616 | - | - | |
Lsi10g00488 | 772 | Pfam | Subtilase family | 127 | 590 | IPR000209 | GO:0006508|GO:0008236 | |
Lsi10g00488 | 772 | SUPERFAMILY | PA domain | 390 | 472 | IPR046450 | - | |
Lsi10g00488 | 772 | Pfam | Peptidase inhibitor I9 | 48 | 104 | IPR010259 | - | |
Lsi10g00488 | 772 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 546 | 556 | IPR023828 | - | |
Lsi10g00488 | 772 | Pfam | Fibronectin type-III domain | 662 | 766 | IPR041469 | - | |
Lsi10g00488 | 772 | Gene3D | - | 345 | 484 | - | - | |
Lsi10g00488 | 772 | Gene3D | Peptidase S8/S53 domain | 129 | 629 | IPR036852 | GO:0004252|GO:0006508 | |
Lsi10g00488 | 772 | Gene3D | - | 633 | 769 | - | - | |
Lsi10g00488 | 772 | CDD | PA_subtilisin_like | 351 | 477 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi06g00869 | Lsi-Chr6:18205003 | Lsi10g00488 | Lsi-Chr10:7018143 | 3.22E-07 | dispersed | |
Lsi08g01515 | Lsi-Chr8:23224529 | Lsi10g00488 | Lsi-Chr10:7018143 | 0 | dispersed | |
Lsi01g00203 | Lsi-Chr1:1900585 | Lsi10g00488 | Lsi-Chr10:7018143 | 1.65E-59 | transposed | |
Lsi02g01071 | Lsi-Chr2:11826376 | Lsi10g00488 | Lsi-Chr10:7018143 | 1.22E-79 | transposed | |
Lsi02g02862 | Lsi-Chr2:34835744 | Lsi10g00488 | Lsi-Chr10:7018143 | 0 | transposed | |
Lsi10g00488 | Lsi-Chr10:7018143 | Lsi04g01764 | Lsi-Chr4:24883208 | 2.21E-164 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi10g00488 | - | - | csv:101217844 | 1444.48 |