Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi10g00515 ATGATTGTTCCGACGTCGGAGGCACAACTCCGACGAGATTTCTACGCTGATGTCTGTCCTAATGTCGAAAGCATAGTTCGAAATGCCGTAACGAAGAAGTTCAAACAAACATTTGTCACTGTTCCCGCCACCCTTCGTCTCTTCTTCCACGATTGCTTTGTTCAGGGATGTGATGCATCAGTGATGATTGCTTCTAGTGGAGGTAACAAGGCGGAGAAGGATCACCCTGATAATCTTTCATTAGCTGGAGATGGATTTGATACTGTCATCAAAGCCAAAGCGGCAGTTGACGCTGTGCCAGGATGTAAAAATCAAGTCTCATGTGCTGATATTCTCGTCATGGCTACTCGAGATGCTAGAGGACCTTCGTATGCAGTGGAGCTAGGAAGAAAAGATGGGCTTGTTTCAAGGGCTTCAGATGTGGAAGGAAAATTGCCTCAACCAATCTTTAATCTCAATCAACTCAATGCCATGTTTGCTGCCAATGGTCTTTCTCAAGCTGACATGATTGCTCTCTCTGTGGATCCAACGTTGAATCCGACATACGCAGCCCAGCTTCAAGACATGTGCCCCAAAGATGTGGATCCAAGGATAGCCATAAACATGGATCCAAACACCCCCACGAGGTTCGACAATATGTACTTCAAGAATCTCCAACAAGGAAAGGGCCTTTTCACTTCTGACCAAATCCTTTTCACTGATTCAAGATCTAAATCCACTGTCAATATTTGGGCCCATAGTGGACAAACCTTCTACACGGCCTTCATTAATGCCATGACCAAGTTGGGTCGAGTCGGACTTCTTTTCAAATTGAAACAAATTTTCCCTCCCCTTACCATGAGTTACTACGACCACCAACAACCGCCTGTTGGGGCTCCGCCGCCGCAAGGATTCCCTCCCAAGGACGCTTACCCTCCCCCAGGGTACCCTGTTCAGGGCTACCCTGCAGCGCAAGGCTACCCTCCGCCGCCGCCGCCGCCGGCTTATGGCCCACAGTACACTCAACCTCCTCCCAAGAATGAAACAACTGGTTGCCTTGAAGGATGGTCAGTCACCTTCCCTCTTTAA 1068 48.41 MIVPTSEAQLRRDFYADVCPNVESIVRNAVTKKFKQTFVTVPATLRLFFHDCFVQGCDASVMIASSGGNKAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPGCKNQVSCADILVMATRDARGPSYAVELGRKDGLVSRASDVEGKLPQPIFNLNQLNAMFAANGLSQADMIALSVDPTLNPTYAAQLQDMCPKDVDPRIAINMDPNTPTRFDNMYFKNLQQGKGLFTSDQILFTDSRSKSTVNIWAHSGQTFYTAFINAMTKLGRVGLLFKLKQIFPPLTMSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPPAYGPQYTQPPPKNETTGCLEGWSVTFPL 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7360540 7366493 + Lsi10G005150.1 Lsi10g00515 672072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi10g00515 355 ProSiteProfiles Plant heme peroxidase family profile. 9 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lsi10g00515 355 Gene3D - 13 146 - -
Lsi10g00515 355 Gene3D Peroxidase, domain 2 147 173 - -
Lsi10g00515 355 CDD secretory_peroxidase 9 268 IPR033905 GO:0004601|GO:0042744
Lsi10g00515 355 MobiDBLite consensus disorder prediction 288 334 - -
Lsi10g00515 355 PANTHER - 4 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi10g00515 355 Gene3D Peroxidase, domain 2 174 262 - -
Lsi10g00515 355 MobiDBLite consensus disorder prediction 286 345 - -
Lsi10g00515 355 ProSitePatterns Peroxidases active site signature. 41 52 IPR019794 GO:0004601
Lsi10g00515 355 PRINTS Plant peroxidase signature 84 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi10g00515 355 PRINTS Plant peroxidase signature 217 234 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi10g00515 355 PRINTS Plant peroxidase signature 120 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi10g00515 355 PRINTS Plant peroxidase signature 43 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi10g00515 355 PRINTS Plant peroxidase signature 257 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi10g00515 355 PRINTS Plant peroxidase signature 201 216 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi10g00515 355 PRINTS Plant peroxidase signature 19 38 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lsi10g00515 355 Pfam Peroxidase 26 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lsi10g00515 355 PRINTS Haem peroxidase superfamily signature 106 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lsi10g00515 355 PRINTS Haem peroxidase superfamily signature 168 183 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lsi10g00515 355 PRINTS Haem peroxidase superfamily signature 41 55 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lsi10g00515 355 PRINTS Haem peroxidase superfamily signature 203 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lsi10g00515 355 PANTHER PEROXIDASE 4 267 - -
Lsi10g00515 355 SUPERFAMILY Heme-dependent peroxidases 9 270 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi03g00593 Lsi-Chr3:7356349 Lsi10g00515 Lsi-Chr10:7360540 1.31E-06 dispersed
Lsi03g00594 Lsi-Chr3:7366587 Lsi10g00515 Lsi-Chr10:7360540 3.53E-08 dispersed
Lsi03g01013 Lsi-Chr3:19501714 Lsi10g00515 Lsi-Chr10:7360540 3.40E-08 dispersed
Lsi04g02192 Lsi-Chr4:28971877 Lsi10g00515 Lsi-Chr10:7360540 3.87E-118 dispersed
Lsi10g00515 Lsi-Chr10:7360540 Lsi02g00351 Lsi-Chr2:3006170 1.09E-60 dispersed
Lsi10g00515 Lsi-Chr10:7360540 Lsi02g01539 Lsi-Chr2:21230961 5.29E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi10g00515 K00430 - csv:101208254 485.723