Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi10g00726 ATGATAGAAATACTTGAAGGCTACAAGGCGATCACAGTTCCATCAGAAGAGGATAAAAGAAGCCAGAGATCCTTATATGCTCAATTAGAGGCTGTGGCTGACATGAAATTCACCTACGTTGCTACTTGCCAAAACTATGGAAATCAGAAACGGAGTGGGGATCGTCGAGCTACAGATATCCTGAATTTGATGGTTAATAATCCATCTCTTCGTGTGGCATATATTGATGAAGTTGAAGAAAGAGAAGGTGGAAAAGCACAGAAAGTTTACTATTCTGTATTGGTCAAAGCTGTTGATAATCTTGACCAGGAAATCTATCGGATTAAGCTACCTGGTTCAGCTAAGATCGGAGAAGGGAAACCTGAAAATCAAAACCATGCTATAATTTTTACGAGAGGTGAAGCACTTCAAGCAATTGACATGAATCAGGACAATTACTTGGAAGAAGCTTTCAAAATGCGAAACCTTCTAGAAGAGTTCAATGAGGACCATGGTGTTCGTCCACCTACAATTTTGGGTGTGCGTGAACATATCTTTACTGGAAGTGTTTCTTCTCTGGCTTGGTTTATGTCCAATCAAGAAACTAGCTTTGTTACTATTGGTCAGAGGGTTCTTGCAAGGCCTCTAAAGGTGAGGTTCCACTATGGTCATCCAGATGTTTTTGATCGAATCTTCCATATTACTCGTGGGGGCATGAGCAAAGCTTCTCGAGGCATCAACCTCAGTGAGGATATCTTTGCTGGCTTTAACTCAACGTTGAGACGAGGAAATGTAACCCACCATGAGTATATTCAAGTTGGGAAAGGGAGAGATGTTGGTCTTAATCAAATCTCTCTTTTTGAGGCAAAGGTAGCTTGTGGTAATGGAGAGCAAATTCTCAGCAGAGACATCTATCGTCTGGGTCATCGTTTTGACTTTTTCCGCATGTTGTCTTTCTACTTCACAACAGTAGGGTTTTACGTCAGTGCAATGATGATTGTCATTACAGTATATACTTTCTTATATGGTAGACTTTATCTGTCATTGAGTGGATTGGAGAAGTCCATAATGAAATATGCTAGATCAAAAGGAGATGATCCTTTAAAGGCGGCCATGGCTTCACAATCAGTTGTTCAGTTAGGTCTTTTAACTGCCTTGCCAATGATCATGGAAATTGGGCTTGAGAGAGGGTTTAGAACTGCAATAGGTGACTTGATAATCATGCAATTACAACTAGCATCCGTTTTCTTCACATTCTCTCTTGGCACAAAGGTGCATTATTATGGGCGCACAATCCTTCATGGTGGGGCAAAGTATAGAGCTACCGGTCGTGGTTTTGTTGTGCGACATGAGAAATACGCTGAGAACTATAGGATGTATTCAAGGAGTCACTTTGTCAAAGGACTAGAGCTTATGATATTGCTTATAGTTTACCAGATATATGGAACAGCTGCTAGTGATCCTGTAGCTTATATTCTTGTCACATCCTCAATGTGGTTCCTGGTTGTTTCCTGGTTGTTTGCCCCTTTCCTTTTCAACCCTTCAGGTTTTGAATGGCAAAAGATAGTGGATGATTGGGATGATTGGTCAAAATGGATTAACAGCAGAGGTGGTGTTGGTGTGCCTGCAAACAAAAGTTGGGAGTCCTGGTGGGACGAGGAACAAGAACACCTTCAACACACTGGATTCGTTGGACGCTTCTGGGAAATCGTACTATCTATCCGATTCTTTCTCTATCAGTATGGAATAATATATCATCTACATGTGGCTGGAAATAATAAAAGCATCACGGTGTATGGGTTATCCTGGCTTGTCATTGTTGCTGTGATGGTTATACTGAAGATTGTGTCCATGGGTAGAAAGAAATTCAGTGCAGACTTCCAGCTATTGTTCAGACTTCTCAAGTTGTTCCTATTCATTGGTTCGGTGGTCGTAGTAGCAATGCTGTTTACGCTTCTCCATCTCACAGTCGGCGACATTTTTGCAAGCATCCTAGCTTTCATGCCTACAGGCTGGGCTATTTTGCAAATAGCACAAGCTTGCAGACCTATTATGAAAGCAATAGGGATGTGGGGATCAGTTAAAGCTCTAGCCAGAGGGTACGAGTACGTGATGGGCGTTGTCATTTTCACACCTGTGGCCGTGCTCGCCTGGTTCCCATTCGTGTCGGAGTTCCAGACGAGGCTCCTCTTCAACCAAGCATTCAGCAGAGGTCTCCAAATCCAAAGGATTCTGGCTGGTGGGAAGAAGAACAAGTAA 2238 42.36 MIEILEGYKAITVPSEEDKRSQRSLYAQLEAVADMKFTYVATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREGGKAQKVYYSVLVKAVDNLDQEIYRIKLPGSAKIGEGKPENQNHAIIFTRGEALQAIDMNQDNYLEEAFKMRNLLEEFNEDHGVRPPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGMSKASRGINLSEDIFAGFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQILSRDIYRLGHRFDFFRMLSFYFTTVGFYVSAMMIVITVYTFLYGRLYLSLSGLEKSIMKYARSKGDDPLKAAMASQSVVQLGLLTALPMIMEIGLERGFRTAIGDLIIMQLQLASVFFTFSLGTKVHYYGRTILHGGAKYRATGRGFVVRHEKYAENYRMYSRSHFVKGLELMILLIVYQIYGTAASDPVAYILVTSSMWFLVVSWLFAPFLFNPSGFEWQKIVDDWDDWSKWINSRGGVGVPANKSWESWWDEEQEHLQHTGFVGRFWEIVLSIRFFLYQYGIIYHLHVAGNNKSITVYGLSWLVIVAVMVILKIVSMGRKKFSADFQLLFRLLKLFLFIGSVVVVAMLFTLLHLTVGDIFASILAFMPTGWAILQIAQACRPIMKAIGMWGSVKALARGYEYVMGVVIFTPVAVLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKNK 745
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10105574 10109247 - Lsi10G007260.1 Lsi10g00726 672283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi10g00726 745 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 4 744 - -
Lsi10g00726 745 PANTHER CALLOSE SYNTHASE 5 4 744 - -
Lsi10g00726 745 Pfam 1,3-beta-glucan synthase component 19 560 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi10g00726 Lsi-Chr10:10105574 Lsi11g01625 Lsi-Chr11:24589546 0 dispersed
Lsi10g00726 Lsi-Chr10:10105574 Lsi06g00462 Lsi-Chr6:5209926 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi10g00726 K11000 - csv:101219503 1448.34