Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi10g00753 | ATGACTGAAAATGTTCCGTCGCAGGCGGCAGCTTCTCCCTTGAAGCTTTACTCGTACTGGAGGAGCTCTTGTTCTTACCGTGTTCGAATTGCCCTTAACTTGAAAGGGCTTAATTTCGAGTACAAAGCTGTTGACCTACTGAAGGGAGAGCAATTCAGTCCCGAGTATGAGAAGCTCAATCCTATTGGTTATGTACCCACTCTTGTGGATGGGGATTATTTGGAGGAGAAGTACCCTCAGCATCCTCTGTTGCCTCGTGATCTTAGTAAAAGAGCTATTAATTACCAGGCTGCAAACATTGTTTCTTCTAGCATACAGCCTCTTCAAAATCTAGCTGTTCTGAAGTACATTGAGGAAAAATCTGGTCCAGCAGAGAAACTTCGTTGGGTTCAACATCACATTGAAAAAGGTTTTACAGCACTTGAAAAGCTGCTAAAAGCTCACGCTGGGAAATATGCTACTGGAGAGGAAATCTATCTGGCGGACTTGTTTTTGGCTCCTCAAATTCATGGCGCCATCAATAGATTCAGTGTTGACATGTCCAAATTTCCTCTTTTATGGAGGTTGAATGAGGAATACAATACTATAGCAGCATTTCAAGATGCAGCGCCAGCAAACCAGCCTGATGCTACTCAAAGCTCTAGTTAA | 648 | 43.21 | MTENVPSQAAASPLKLYSYWRSSCSYRVRIALNLKGLNFEYKAVDLLKGEQFSPEYEKLNPIGYVPTLVDGDYLEEKYPQHPLLPRDLSKRAINYQAANIVSSSIQPLQNLAVLKYIEEKSGPAEKLRWVQHHIEKGFTALEKLLKAHAGKYATGEEIYLADLFLAPQIHGAINRFSVDMSKFPLLWRLNEEYNTIAAFQDAAPANQPDATQSSS | 215 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 10352564 | 10356605 | - | Lsi10G007530.1 | Lsi10g00753 | 672310 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi10g00753 | 215 | PANTHER | MALEYLACETOACETATE ISOMERASE | 7 | 211 | - | - | |
Lsi10g00753 | 215 | Gene3D | Glutaredoxin | 12 | 85 | - | - | |
Lsi10g00753 | 215 | TIGRFAM | maiA: maleylacetoacetate isomerase | 15 | 210 | IPR005955 | GO:0003824|GO:0005737|GO:0009072 | |
Lsi10g00753 | 215 | SFLD | Main (cytGST) | 14 | 189 | - | - | |
Lsi10g00753 | 215 | SUPERFAMILY | GST C-terminal domain-like | 82 | 210 | IPR036282 | - | |
Lsi10g00753 | 215 | PANTHER | GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 | 7 | 211 | - | - | |
Lsi10g00753 | 215 | CDD | GST_N_Zeta | 14 | 72 | IPR034333 | - | |
Lsi10g00753 | 215 | SFLD | Glutathione Transferase (cytosolic) | 14 | 189 | IPR040079 | - | |
Lsi10g00753 | 215 | Gene3D | - | 86 | 213 | - | - | |
Lsi10g00753 | 215 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 87 | 212 | IPR010987 | - | |
Lsi10g00753 | 215 | Pfam | Glutathione S-transferase, C-terminal domain | 116 | 192 | IPR004046 | - | |
Lsi10g00753 | 215 | SUPERFAMILY | Thioredoxin-like | 11 | 86 | IPR036249 | - | |
Lsi10g00753 | 215 | Pfam | Glutathione S-transferase, N-terminal domain | 13 | 72 | IPR004045 | - | |
Lsi10g00753 | 215 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 12 | 125 | IPR004045 | - | |
Lsi10g00753 | 215 | CDD | GST_C_Zeta | 90 | 207 | IPR034330 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi05g01960 | Lsi-Chr5:26731176 | Lsi10g00753 | Lsi-Chr10:10352564 | 1.15E-48 | dispersed | |
Lsi09g00644 | Lsi-Chr9:7196823 | Lsi10g00753 | Lsi-Chr10:10352564 | 5.53E-74 | dispersed | |
Lsi10g00753 | Lsi-Chr10:10352564 | Lsi05g01792 | Lsi-Chr5:25252352 | 2.16E-09 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi10g00753 | K01800 | - | csv:101213302 | 361.688 |