Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi10g01061 ATGGCGTCACTGGCGCTCACTTCCTCGTATCTCCCTTCTCTCCGGTCGCGTCTTCCGAAATCTGAATCTAATGCTCAAATTCGTTGCTCATCTCTCCGTTCCAGTCTTCCCAAACCAGCCATTTTCGGTAGCGGCGTCAGAACTAGCTTCCGCATTCCGTCTTCTTTATCCAATGAAGCTAAATCAGTTAAACCAGCTCTAAATTTCGGAAGTTCTCGTGGAAATCTTGGTGGTTTTACTGTCCGAGCGTCTTCTTCCTCTGCTGCTGCTGTAGTTCCAGCTCCGGCTCCTCAGCCATGGCAAGGTGCGGCGATTAAGCCACTGATTGCTTCGATTGCTACGGGTATCATTCTGTGGTTTGTTCCGGTGCCGTCTGGCGTTTCTCGAAACGCGTGGCAATTGCTTGCGATTTTCCTCGCTACCATCGTTGGGATTATTACTCAGCCCTTGCCTCTTGGTGCGGTTGCTCTGCTGGGACTTGGCGCCTCTGTTCTGACTAAAACCCTAACCTTCTCTGCTGCCTTCTCTGCGTTTGGTGATCCCATCCCATGGCTCATCGCTCTTGCCTTCTTCTTCGCTCGAGGATTCATTAAGACCGGACTTGGTAATCGAATTGCTTATCAATTTGTTTCTCTATTCGGTAGTTCCTCGTTAGGGTTAGGGTATAGTTTAGTATTCAGTGAGGCCCTGTTGGCGCCGGCAATTCCTTCGGTGTCGGCCAGAGCAGGAGGGATATTCCTTCCACTGGTAAAATCGCTTTGTGTTGCTTGCGGTAGCAATGTCGGTGATGGGACGGAGAACCGGTTGGGAGCGTGGTTAATGCTCACTTGCTTTCAAACTTCGGTGATTTCATCATCCATGTTCTTGACGGCTATGGCTGCTAATCCTCTGAGTGCGACTCTGACGTATAACACGATTAAGCAGACGATTGGATGGACCGACTGGGCTAAAGCAGCCATTGTTCCAGGATTGATCTCCTTGATTGTGGTCCCATTGCTTTTGTATGTGATTTATCCGCCCACGGTGAAGAGCAGTCCAGACGCTCCAAAGCTTGCCAAAGAGAAATTGGAAAAGATGGGACCAATGACCAAGAATGAGATTATAATGGCTGGAACTCTGCTTCTCACGGTGGGTCTTTGGGTTTTTGGAGGGGTTCTTAATGTGGACGCTGTTACTGCTGCCATTTTGGGATTGTCTGTCCTTCTTGTGACTGGGGTTGTGACATGGAAAGAGTGCTTGGCAGAAGCTGTTGCCTGGGACACTCTAACATGGTTTGCTGCACTCATTGCAATGGCAGGGTATCTCAACAAATATGGTCTCATCTCCTGGTTCAGCCAAACCGTAGTGAAGTTTGTTGGCGGCCTAGGTCTTTCATGGCAGCTTTCGTTCGGCATTTTAGTTCTTCTCTATTTCTACTCCCACTACTTCTTTGCAAGTGGAGCTGCTCATATAGGCGCGATGTTTACAGCCTTCTTATCTGTTGCTAGTGCTTTGGGAACTCCCCCCTACTTTGGAGCAATTGTACTTTCCTTCTTATCTAATCTGATGGGTGGCCTAACTCACTACGGGATTGGGTCAGCACCTGTTTTCTATGGTGCTAACTATGTTCCTCTTGCTCAATGGTGGGGCTACGGGTTCCTCGTATCTGTCGTCAACATCATTATCTGGCTCGGCGCTGGGGGAATTTGGTGGAAGGCCATTGGTTTATGGTGA 1713 49.04 MASLALTSSYLPSLRSRLPKSESNAQIRCSSLRSSLPKPAIFGSGVRTSFRIPSSLSNEAKSVKPALNFGSSRGNLGGFTVRASSSSAAAVVPAPAPQPWQGAAIKPLIASIATGIILWFVPVPSGVSRNAWQLLAIFLATIVGIITQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTENRLGAWLMLTCFQTSVISSSMFLTAMAANPLSATLTYNTIKQTIGWTDWAKAAIVPGLISLIVVPLLLYVIYPPTVKSSPDAPKLAKEKLEKMGPMTKNEIIMAGTLLLTVGLWVFGGVLNVDAVTAAILGLSVLLVTGVVTWKECLAEAVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPYFGAIVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAQWWGYGFLVSVVNIIIWLGAGGIWWKAIGLW 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14855771 14860178 + Lsi10G010610.1 Lsi10g01061 672618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi10g01061 570 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 122 564 IPR001898 GO:0016020|GO:0022857|GO:0055085
Lsi10g01061 570 CDD ArsB_NhaD_permease 142 564 - -
Lsi10g01061 570 Pfam Sodium:sulfate symporter transmembrane region 107 570 IPR001898 GO:0016020|GO:0022857|GO:0055085
Lsi10g01061 570 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 82 570 - -
Lsi10g01061 570 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 82 570 IPR030676 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi03g00956 Lsi-Chr3:18309089 Lsi10g01061 Lsi-Chr10:14855771 3.00E-144 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi10g01061 - - bhj:120088316 981.859