Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi10g01083 ATGGCGAAGAAAAATTTCCCCATCTTGTTTCATTTCATCTTTTCTCTTTTAGCCGCCATTTTCATCTCTGTTTATGGATCAGAAAGAAAAGTTCATATTGTGTATATGGGGTCACTCAAAAACAGAGCAATGGCAAAATCAACCCACCATTTGAATCTTCTTCAATCGGTAATTGGAAGTTCTAATGAAACAGAGAGTTCTTATATTCGTAGTTATGGAAGGAGCTTCAATGGCTTTGCTGCAAAACTTACTGACACTGAAACAGAGCAACTCGCCGCCATGGAAGGAGTAGTCTCTGTTTTCGAAAGCAAACTACTCAAAACCCAAACAACTAGATCATGGAACTATTTGGGATTGAATAAAAAATCTAAAAGAAATCTCCCCGGTGAAAGTGACGTCATAATTGGGTCAATCGACACCGGAATTTGGCCAGAATCTGAGAGCTTCAACGACGAGGGATTAGGCCCGCCGCCGCTGCGGTGGAGAGGGGTGTGTGCCGGCGGAGAGAATTTCACGTGCAACAACAAGGTCATTGGAGCTCGTTTTTACACCGGCGACGTGTCGGCCAGGGACACGGTCGGCCACGGAACTCACACTGCGTCAACGGCGGCCGGAAAATCGGTGAAGACGGGCGGATTTTATGGAATTGGCGGAGGAATTGCTAGAGGAGCAGTTCCTTCATCAAGAATCGCGGTTTACAAAGTGTGCAATCCGAGTTGCTCGGAAGTGGATATCTTGGCGGCGTTTGACGACGCCATTGCCGACGGTGTTGATGTAATCACAATTTCAATCGGCGGGCTCGGTGCAATTGCTTTTGAAATTGACTCCATTGCAATTGGGTCTTTTCACGCCATGGCCAGAGGGATCCTGACCGTCCATGCCGCCGGAAATGATGGCCCGGTGGATGGAACGGTGACAAGTGTAGCTCCGTGGCTGTTTACCGTCGCCGCCACCACTACCGACCGAACCATTGTTGTCCTTGGCAATGGAAAGACAGTTATTGGCAATTCAGTGAATTCCTTCTTATCCAATAACAATAAGAGCATTCCATTGATTTATGGAACTAATGCTTCAAAAATTTGTTCCACAAATCTTTCACAAATTTGTGCTAAAGGTTGTTTGGATCCTAAGTTAGTGAAGGACAAAATTGTCCAATGTATGTCTTTTAAAGGACTTTATGAAGTTCTTAAAGTTGGAGCTAAAGGAGCACTGGTTCTTAATGATAACATTGATAATGTTTCTATTGTTGTTCCATTGGCTTCAACTGCTTTAAATGAGATGAATTTTAAGGATGTTACAAATTACATTAATTCTTCGATTAATCCTAAAGTGAGGATTCTCAAAAGTGTAGCCATTAAAAATGTTAATGCTCCAATCATAGCTCAATTCTCTAGTCGTGGACCAAATCTTTTGATGCCAGAGATCTTAAAGCCCGACATTGCAGCTCCTGGTGTTGAAATTCTTGCAGCATTTTCTCCAGTTGTTTCTCCTTCCGATGATCTTGGAGACAAAAGATCTGTGGATTTCACAATTATGTCTGGAACTTCCATGTCTTGTCCTCATGTTGCTGGTTTGGTTGCTTATGTTAAGAGTTTTCATTGCGATTGGTCGCCGTCGGCGATTAAATCCGCCATCATGACGACGGCTAAACAAATCATTAGTACTGATCATAATCATACTAAGGAGTTTCTTTATGGTTCAGGCCAAATCAAACCAAGAAAAGCCATCAAACCTGGACTTGTTTATGAAACTTTGGAGGAAGATTATTTGAATTTTCTTTGTGGGAGTGGGTTTGATTCAAAGATAATTAAGGTTATTTCAGGAAATAATAATAGTTGTTCAAGAAATATGAGAAGATTTCCACCTCAAGATCTTAATTACCCTGCAATGGTGATTCAAGTCTTGACAATGAAACCTTTTGTGGTTAAGTTTAAGAGGGAGGTGACTAATGTTGGGATTGCAAACTCTACTTACAGGTCAAAATTGTTGAAATTTTCTCGAGTTTATGTTGGTAAGTCAAATGAAAAGTTTAAAGTCAATGTTAAGCCTCGAGAGTTATCTTTTGAAGCATTGAATGAGAAGAGGAGCTTTATTGTGACGGTGGTTGGAGGGGCAATCTTTTCAGATACAGTGTTTTCTACATCATTGGTTTGGAGTGATGGGATTCATAAAGTTAGAAGTCCGATTATTGTGAGAATTACATCAAATCCTACTCGTATCTCAAATTAA 2229 41.14 MAKKNFPILFHFIFSLLAAIFISVYGSERKVHIVYMGSLKNRAMAKSTHHLNLLQSVIGSSNETESSYIRSYGRSFNGFAAKLTDTETEQLAAMEGVVSVFESKLLKTQTTRSWNYLGLNKKSKRNLPGESDVIIGSIDTGIWPESESFNDEGLGPPPLRWRGVCAGGENFTCNNKVIGARFYTGDVSARDTVGHGTHTASTAAGKSVKTGGFYGIGGGIARGAVPSSRIAVYKVCNPSCSEVDILAAFDDAIADGVDVITISIGGLGAIAFEIDSIAIGSFHAMARGILTVHAAGNDGPVDGTVTSVAPWLFTVAATTTDRTIVVLGNGKTVIGNSVNSFLSNNNKSIPLIYGTNASKICSTNLSQICAKGCLDPKLVKDKIVQCMSFKGLYEVLKVGAKGALVLNDNIDNVSIVVPLASTALNEMNFKDVTNYINSSINPKVRILKSVAIKNVNAPIIAQFSSRGPNLLMPEILKPDIAAPGVEILAAFSPVVSPSDDLGDKRSVDFTIMSGTSMSCPHVAGLVAYVKSFHCDWSPSAIKSAIMTTAKQIISTDHNHTKEFLYGSGQIKPRKAIKPGLVYETLEEDYLNFLCGSGFDSKIIKVISGNNNSCSRNMRRFPPQDLNYPAMVIQVLTMKPFVVKFKREVTNVGIANSTYRSKLLKFSRVYVGKSNEKFKVNVKPRELSFEALNEKRSFIVTVVGGAIFSDTVFSTSLVWSDGIHKVRSPIIVRITSNPTRISN 742
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15100733 15103879 - Lsi10G010830.1 Lsi10g01083 672640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi10g01083 742 CDD Peptidases_S8_3 106 549 IPR034197 -
Lsi10g01083 742 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Lsi10g01083 742 PRINTS Subtilisin serine protease family (S8) signature 513 529 IPR015500 -
Lsi10g01083 742 PRINTS Subtilisin serine protease family (S8) signature 191 204 IPR015500 -
Lsi10g01083 742 Gene3D Peptidase S8/S53 domain 132 589 IPR036852 GO:0004252|GO:0006508
Lsi10g01083 742 ProSitePatterns Serine proteases, subtilase family, serine active site. 514 524 IPR023828 -
Lsi10g01083 742 Pfam Peptidase inhibitor I9 31 108 IPR010259 -
Lsi10g01083 742 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 734 IPR045051 -
Lsi10g01083 742 SUPERFAMILY Subtilisin-like 109 580 IPR036852 GO:0004252|GO:0006508
Lsi10g01083 742 CDD PA_subtilisin_like 325 446 - -
Lsi10g01083 742 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 31 734 - -
Lsi10g01083 742 Pfam Fibronectin type-III domain 624 731 IPR041469 -
Lsi10g01083 742 Pfam Subtilase family 131 566 IPR000209 GO:0006508|GO:0008236
Lsi10g01083 742 Gene3D - 593 734 - -
Lsi10g01083 742 Gene3D - 321 453 - -
Lsi10g01083 742 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 108 IPR037045 -
Lsi10g01083 742 ProSiteProfiles Serine proteases, subtilase domain profile. 113 576 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi09g00086 Lsi-Chr9:764376 Lsi10g01083 Lsi-Chr10:15100733 3.21E-143 dispersed
Lsi10g01083 Lsi-Chr10:15100733 Lsi07g01431 Lsi-Chr7:20842733 2.32E-168 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi10g01083 - - cmax:111490708 993.03