Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi10g01181 | ATGAGGGCGTTGCAATTGCAGCTTAGAATTGACGCAAATCTTGTAAAGCCATTTTGTCATCTCTGCCCTGCTTCATCTCTGAATCCCTCGCCATTGCTTGTTTTTCAACCTATAAAATACCCCCATCTTCAGAAATTCAAGCCTTCTCGAAGTTCCCGTCGAACCCATTTCTCAACGCCATCGACATCTTTCACCGTAGCTTCTTCCATGGCTGATTCTTCTCTTTCCAGAAGCTCAGAAACAGAGACAAAACCTTTCTCTGTGCTTTTCGTTTGCTTGGGCAACATCTGTAGAAGCCCAGCTGCTGAAGGAGTATTCAGAAACTTGGTGACGAAGAAGGGTTTCGATTCCAAATTCTTTATCGATTCTGCTGGCACCATTGGTTATCATGAGGGTAATGAGGCCGACCCAAGAATGAGGGCAGCCTCTAAACGACGTGGGATAGCAATAACATCCATCTCGAGGCCAATCCTGCCATCTGATTTTGTAAATTTTGATCTTATTCTTGCCATGGACAAGCAAAACAGAGAGGATATTTTGGGGGCTTTCGAACGGTGGAGAACAAAGAATGGCCTTCCTCCTGATTCACATAAAAAGGTCAAATTAATGTGCTCGTATTGTAAAAAGCACGACGAAACGGAAGTACCGGATCCTTATTACGGTGGCCAACAAGGTTTTGAGAAGGTCCTGGACTTGCTTGAAGATGCCTGTGAATCGCTGTTGGAAAGCATCTTGGCAGAAAACAAACACATCTCAGATTAA | 762 | 44.23 | MRALQLQLRIDANLVKPFCHLCPASSLNPSPLLVFQPIKYPHLQKFKPSRSSRRTHFSTPSTSFTVASSMADSSLSRSSETETKPFSVLFVCLGNICRSPAAEGVFRNLVTKKGFDSKFFIDSAGTIGYHEGNEADPRMRAASKRRGIAITSISRPILPSDFVNFDLILAMDKQNREDILGAFERWRTKNGLPPDSHKKVKLMCSYCKKHDETEVPDPYYGGQQGFEKVLDLLEDACESLLESILAENKHISD | 253 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 16088583 | 16091324 | + | Lsi10G011810.1 | Lsi10g01181 | 672738 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi10g01181 | 253 | SMART | LMWPc_2 | 86 | 243 | IPR023485 | - | |
Lsi10g01181 | 253 | SUPERFAMILY | Phosphotyrosine protein phosphatases I | 84 | 244 | IPR036196 | - | |
Lsi10g01181 | 253 | PRINTS | LMW phosphotyrosine protein phosphatase signature | 131 | 147 | IPR017867 | GO:0004725|GO:0006470 | |
Lsi10g01181 | 253 | PRINTS | LMW phosphotyrosine protein phosphatase signature | 215 | 230 | IPR017867 | GO:0004725|GO:0006470 | |
Lsi10g01181 | 253 | PRINTS | LMW phosphotyrosine protein phosphatase signature | 88 | 105 | IPR017867 | GO:0004725|GO:0006470 | |
Lsi10g01181 | 253 | Pfam | Low molecular weight phosphotyrosine protein phosphatase | 88 | 241 | IPR023485 | - | |
Lsi10g01181 | 253 | CDD | LMWPTP | 87 | 242 | - | - | |
Lsi10g01181 | 253 | PANTHER | LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED | 46 | 249 | - | - | |
Lsi10g01181 | 253 | Gene3D | - | 69 | 249 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi10g01181 | K25307 | - | csv:101207515 | 462.996 |