Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi10g01181 ATGAGGGCGTTGCAATTGCAGCTTAGAATTGACGCAAATCTTGTAAAGCCATTTTGTCATCTCTGCCCTGCTTCATCTCTGAATCCCTCGCCATTGCTTGTTTTTCAACCTATAAAATACCCCCATCTTCAGAAATTCAAGCCTTCTCGAAGTTCCCGTCGAACCCATTTCTCAACGCCATCGACATCTTTCACCGTAGCTTCTTCCATGGCTGATTCTTCTCTTTCCAGAAGCTCAGAAACAGAGACAAAACCTTTCTCTGTGCTTTTCGTTTGCTTGGGCAACATCTGTAGAAGCCCAGCTGCTGAAGGAGTATTCAGAAACTTGGTGACGAAGAAGGGTTTCGATTCCAAATTCTTTATCGATTCTGCTGGCACCATTGGTTATCATGAGGGTAATGAGGCCGACCCAAGAATGAGGGCAGCCTCTAAACGACGTGGGATAGCAATAACATCCATCTCGAGGCCAATCCTGCCATCTGATTTTGTAAATTTTGATCTTATTCTTGCCATGGACAAGCAAAACAGAGAGGATATTTTGGGGGCTTTCGAACGGTGGAGAACAAAGAATGGCCTTCCTCCTGATTCACATAAAAAGGTCAAATTAATGTGCTCGTATTGTAAAAAGCACGACGAAACGGAAGTACCGGATCCTTATTACGGTGGCCAACAAGGTTTTGAGAAGGTCCTGGACTTGCTTGAAGATGCCTGTGAATCGCTGTTGGAAAGCATCTTGGCAGAAAACAAACACATCTCAGATTAA 762 44.23 MRALQLQLRIDANLVKPFCHLCPASSLNPSPLLVFQPIKYPHLQKFKPSRSSRRTHFSTPSTSFTVASSMADSSLSRSSETETKPFSVLFVCLGNICRSPAAEGVFRNLVTKKGFDSKFFIDSAGTIGYHEGNEADPRMRAASKRRGIAITSISRPILPSDFVNFDLILAMDKQNREDILGAFERWRTKNGLPPDSHKKVKLMCSYCKKHDETEVPDPYYGGQQGFEKVLDLLEDACESLLESILAENKHISD 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 16088583 16091324 + Lsi10G011810.1 Lsi10g01181 672738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi10g01181 253 SMART LMWPc_2 86 243 IPR023485 -
Lsi10g01181 253 SUPERFAMILY Phosphotyrosine protein phosphatases I 84 244 IPR036196 -
Lsi10g01181 253 PRINTS LMW phosphotyrosine protein phosphatase signature 131 147 IPR017867 GO:0004725|GO:0006470
Lsi10g01181 253 PRINTS LMW phosphotyrosine protein phosphatase signature 215 230 IPR017867 GO:0004725|GO:0006470
Lsi10g01181 253 PRINTS LMW phosphotyrosine protein phosphatase signature 88 105 IPR017867 GO:0004725|GO:0006470
Lsi10g01181 253 Pfam Low molecular weight phosphotyrosine protein phosphatase 88 241 IPR023485 -
Lsi10g01181 253 CDD LMWPTP 87 242 - -
Lsi10g01181 253 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 46 249 - -
Lsi10g01181 253 Gene3D - 69 249 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi10g01181 K25307 - csv:101207515 462.996