Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi10g01555 ATGTATCGAGTAAGAAAAATTCCATCGTTGGTTGATCTTTGTGTTAACAAAGCTATAGATAATCTAAGGTTCCTTGGGGATGTTGGTGAAACTGATATACATCTTCTAGACCGTATTTTGCCACATTGCACAGTTGACCAATTAATGCATGTGGAGAAGAGTTCAGAAGGAAGAGATCTGACTCCAATAACTGATAAATTGTGGAAAAAATTCTATGAAAGACAGTTTGGTAAAGAAAGTACTACTACTGTAATTGAGAGGATGCGGCAAAAAAGAGTGGCATTTAGATGGATTCAATTGTATGAGGCGAAGATGAAGGACATTGAAAAGAATGAGAGCAAAGCTGCAGATCGAATAAAACAAAGCTACCAAAAGGAAAATGCCCGAATTGGATATGGCTACAATGTGGCAAACACTAAGAACAAGATACTGAAGAAGGCAAAGATAGAAGTGCTTCAGAGTCAAGAGATGAAAAATATAAAAGCCTGGCGGAGAAATGCGGTGCAGAAGAGTTCCGATATTTCCACAAAGAAGCCAATGTTTTCTGGAAGGGAATCCGCTTCAACTTCAAATACTTCCAGTCATATGACCAGAAGATGGTAG 603 38.31 MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMKDIEKNESKAADRIKQSYQKENARIGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISTKKPMFSGRESASTSNTSSHMTRRW 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19979210 19982959 - Lsi10G015550.1 Lsi10g01555 673112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi10g01555 200 PANTHER OS08G0169600 PROTEIN 132 197 - -
Lsi10g01555 200 PANTHER OS08G0169600 PROTEIN 3 129 - -
Lsi10g01555 200 MobiDBLite consensus disorder prediction 168 200 - -
Lsi10g01555 200 Pfam RNA polymerase II transcription factor SIII (Elongin) subunit A 25 128 IPR010684 GO:0005634|GO:0006368|GO:0070449
Lsi10g01555 200 Coils Coil 98 118 - -
Lsi10g01555 200 Gene3D - 21 127 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Lsi10g01555 Lsi11g01637 CCT
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi10g01555 K15077 - csv:101220364 368.622