Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi11g00022 | ATGAAATGTGACCACTTAGAAATGGCAATGACTCGAGTGATCGTTGTTGTTACGTTGTCGTTGTTGCTTTTTGGTATAGTTTGTGATGCCCAACTTTCCTCTACATTTTATGATCAAACTTGTCCTACTGTACTCAATACTATCAGAACTGTTGTTAGACAAGCAGTTTCTCAAGAGCGTCGAATGGCTGCATCTCTCATTCGTCTCCATTTTCATGATTGCTTTGTTCAAGGTTGTGATGCGTCGATATTGCTTGATGACACTCCTTCCATGATTGGTGAACAAAATGCAGCTCCAAACAGAAATTCTGCAAGAGGTTATGGAGTGATACACAAGGCTAAGACGGAAGTTGAGAAGATATGTCCTGGCGTTGTATCTTGTGCAGATATTCTTTCAGTAGCTGCAAGAGATGCATCTTTTGCTGTTGGAGGTCCATCTTGGACGGTGAAACTTGGAAGACGAGATTCTACCAGTGCAAGCAAAACTCTAGCAGAAAGTGAGCTACCAGGCTTTCAAGAAAGCCTCAATAGACTTATATCCATTTTTGCAAATAAAGGTCTTAGTGCTAGAGACATGATTGCACTGTCAGGTTCTCACACCATAGGACAAGCTCAATGCTTTCTTTTTCGTAATAGGATATACAACCAAAGTAATATTGACTCAGGATTTGCTAGTACTCGTCGTAGAAATTGTCCTACAACGGGTGAAAATGGAAATTTGGCACCAATTGATTTGGTGACACCTAACTCCTTTGACAATAACTACTTCAAAAATCTTGTGCAAAAGAAGGGATTGCTTGAAACAGATCAAGTTCTCTTCAATGGAGGATCGACTGATAATATTGTCACAGAGTATAGTAGGAATCCAACTACATTCAAATCAGATTTCGCAACTGCAATGATAAAAATGGGAGACATTCAACCTCTCATTGGGGTAGAAGGGCAAATAAGAAACATATGCGCAAGATTCACATTTGAAACTCATAGAGGCTCAAGGTCTATGGACAACATCAATGGCACAAAGCTAGACCAGAGTAAGAAAGAGAGTCCAAGAGAGTGGCCAGCCAAGCAAGGGCGTTGGCTCGGCCAAAGATAA | 1095 | 40.73 | MKCDHLEMAMTRVIVVVTLSLLLFGIVCDAQLSSTFYDQTCPTVLNTIRTVVRQAVSQERRMAASLIRLHFHDCFVQGCDASILLDDTPSMIGEQNAAPNRNSARGYGVIHKAKTEVEKICPGVVSCADILSVAARDASFAVGGPSWTVKLGRRDSTSASKTLAESELPGFQESLNRLISIFANKGLSARDMIALSGSHTIGQAQCFLFRNRIYNQSNIDSGFASTRRRNCPTTGENGNLAPIDLVTPNSFDNNYFKNLVQKKGLLETDQVLFNGGSTDNIVTEYSRNPTTFKSDFATAMIKMGDIQPLIGVEGQIRNICARFTFETHRGSRSMDNINGTKLDQSKKESPREWPAKQGRWLGQR | 364 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 240308 | 243874 | + | Lsi11G000220.1 | Lsi11g00022 | 673189 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi11g00022 | 364 | PANTHER | PEROXIDASE | 11 | 322 | - | - | |
Lsi11g00022 | 364 | SUPERFAMILY | Heme-dependent peroxidases | 31 | 322 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00022 | 364 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 191 | 201 | IPR019793 | - | |
Lsi11g00022 | 364 | PRINTS | Haem peroxidase superfamily signature | 63 | 77 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00022 | 364 | PRINTS | Haem peroxidase superfamily signature | 125 | 142 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00022 | 364 | PRINTS | Haem peroxidase superfamily signature | 244 | 259 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00022 | 364 | PRINTS | Haem peroxidase superfamily signature | 143 | 155 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00022 | 364 | PRINTS | Haem peroxidase superfamily signature | 191 | 206 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00022 | 364 | Pfam | Peroxidase | 49 | 288 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00022 | 364 | Gene3D | Peroxidase, domain 2 | 169 | 303 | - | - | |
Lsi11g00022 | 364 | ProSiteProfiles | Plant heme peroxidase family profile. | 31 | 324 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00022 | 364 | MobiDBLite | consensus disorder prediction | 332 | 364 | - | - | |
Lsi11g00022 | 364 | CDD | secretory_peroxidase | 31 | 323 | IPR033905 | GO:0004601|GO:0042744 | |
Lsi11g00022 | 364 | Gene3D | - | 35 | 320 | - | - | |
Lsi11g00022 | 364 | PANTHER | PEROXIDASE 72-RELATED | 11 | 322 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00022 | 364 | PRINTS | Plant peroxidase signature | 65 | 85 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00022 | 364 | PRINTS | Plant peroxidase signature | 124 | 134 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00022 | 364 | PRINTS | Plant peroxidase signature | 143 | 158 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00022 | 364 | PRINTS | Plant peroxidase signature | 242 | 257 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00022 | 364 | PRINTS | Plant peroxidase signature | 105 | 118 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00022 | 364 | PRINTS | Plant peroxidase signature | 41 | 60 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00022 | 364 | PRINTS | Plant peroxidase signature | 298 | 311 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00022 | 364 | PRINTS | Plant peroxidase signature | 190 | 202 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00022 | 364 | PRINTS | Plant peroxidase signature | 258 | 275 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00022 | 364 | ProSitePatterns | Peroxidases active site signature. | 63 | 74 | IPR019794 | GO:0004601 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi10g01474 | Lsi-Chr10:18870058 | Lsi11g00022 | Lsi-Chr11:240308 | 1.20E-116 | dispersed | |
Lsi10g01475 | Lsi-Chr10:18880440 | Lsi11g00022 | Lsi-Chr11:240308 | 1.97E-130 | dispersed | |
Lsi11g00022 | Lsi-Chr11:240308 | Lsi11g00024 | Lsi-Chr11:252005 | 0 | dispersed | |
Lsi11g00022 | Lsi-Chr11:240308 | Lsi11g00023 | Lsi-Chr11:245729 | 1.54E-169 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi11g00022 | K00430 | - | csv:116403796 | 542.732 |