Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi11g00024 | ATGGGATATTTTACTATATTTCCAAATATAGCATCAATATTTGGTTTTTGTAAATACGACAAAATATTTAACTTGTTGTTGCTTTTGGGTTTAGCTTGCAATGCCCAACTTTCCTCTTCGTTTTACGACCAGACTTGTCCTACTGCACTCACCACTATTAGAACTGTTATCAGGCAAGCGGTCTCGCAAGAACGTCGTATGGCTGCATCTCTCATTCGCCTCCATTTCCACGATTGTTTTGTTCAGGGATGTGATGCGTCAATATTACTTGATGATACTCCCTCTATGATTGGCGAACAAAACGCGGCACCCAACATAAACTCCGCTAGAGGGTACGGGGTGATACACAAGGCGAAGACTGAAGTTGAAAAGAAATGTCCTGGTATCGTATCTTGTGCAGATATTCTTGTTGTAGCTGCAAGAGATGCTTCTTTTGCTGTTGGTGGTCCATCTTGGACAGTAAGGCTTGGCAGAAGAGACTCTACAACTGCAAGCAAAACTCTAGCGGAGAACGAGCTTCCACATTTCCAAGCAAGTCTTGATAGACTTATTTCCATCTTTGCAAATAAGGGACTTAGTACGAGAGATATGGTTGCACTGTCAGGTTCTCATACTATAGGACAATCTCAATGCTTTCTTTTCCGCAATAGGATATACAACCAAAGTAATATTGATGCAGGATTTGCTAGCACACGCCGTAGAAATTGTCCAACATCTAGTGGAAATGGAAATTTGGCACCACTTGATTTGGTCACACCCAATTCCTTTGACAATAATTACTTCAAAAATCTTGTTCAAAGAAAGGGTTTGCTAGAAACAGATCAAGTCCTCTTTAATGGAGGATCAACGGATAATATTGTTATAGAGTACAGTAGAGATCCAACAGCATTCAAATCTGACTTTGCAGCTGCAATGATTAAAATGGGAGACATCGAACCTCTCATTGGTTTAGAAGGACAGATAAGAAATATATGTGGTGCTGTTAACTAA | 990 | 40.1 | MGYFTIFPNIASIFGFCKYDKIFNLLLLLGLACNAQLSSSFYDQTCPTALTTIRTVIRQAVSQERRMAASLIRLHFHDCFVQGCDASILLDDTPSMIGEQNAAPNINSARGYGVIHKAKTEVEKKCPGIVSCADILVVAARDASFAVGGPSWTVRLGRRDSTTASKTLAENELPHFQASLDRLISIFANKGLSTRDMVALSGSHTIGQSQCFLFRNRIYNQSNIDAGFASTRRRNCPTSSGNGNLAPLDLVTPNSFDNNYFKNLVQRKGLLETDQVLFNGGSTDNIVIEYSRDPTAFKSDFAAAMIKMGDIEPLIGLEGQIRNICGAVN | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 252005 | 256889 | - | Lsi11G000240.1 | Lsi11g00024 | 673191 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi11g00024 | 329 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 196 | 206 | IPR019793 | - | |
Lsi11g00024 | 329 | PRINTS | Haem peroxidase superfamily signature | 148 | 160 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00024 | 329 | PRINTS | Haem peroxidase superfamily signature | 68 | 82 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00024 | 329 | PRINTS | Haem peroxidase superfamily signature | 249 | 264 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00024 | 329 | PRINTS | Haem peroxidase superfamily signature | 130 | 147 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00024 | 329 | PRINTS | Haem peroxidase superfamily signature | 196 | 211 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00024 | 329 | ProSitePatterns | Peroxidases active site signature. | 68 | 79 | IPR019794 | GO:0004601 | |
Lsi11g00024 | 329 | ProSiteProfiles | Plant heme peroxidase family profile. | 36 | 329 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00024 | 329 | Gene3D | Peroxidase, domain 2 | 174 | 308 | - | - | |
Lsi11g00024 | 329 | CDD | secretory_peroxidase | 36 | 328 | IPR033905 | GO:0004601|GO:0042744 | |
Lsi11g00024 | 329 | PRINTS | Plant peroxidase signature | 263 | 280 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00024 | 329 | PRINTS | Plant peroxidase signature | 195 | 207 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00024 | 329 | PRINTS | Plant peroxidase signature | 110 | 123 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00024 | 329 | PRINTS | Plant peroxidase signature | 70 | 90 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00024 | 329 | PRINTS | Plant peroxidase signature | 148 | 163 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00024 | 329 | PRINTS | Plant peroxidase signature | 129 | 139 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00024 | 329 | PRINTS | Plant peroxidase signature | 303 | 316 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00024 | 329 | PRINTS | Plant peroxidase signature | 46 | 65 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00024 | 329 | PRINTS | Plant peroxidase signature | 247 | 262 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00024 | 329 | PANTHER | PEROXIDASE 72-RELATED | 21 | 328 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00024 | 329 | SUPERFAMILY | Heme-dependent peroxidases | 36 | 329 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00024 | 329 | Pfam | Peroxidase | 54 | 293 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi11g00024 | 329 | Gene3D | - | 41 | 325 | - | - | |
Lsi11g00024 | 329 | PANTHER | PEROXIDASE | 21 | 328 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi11g00022 | Lsi-Chr11:240308 | Lsi11g00024 | Lsi-Chr11:252005 | 0 | dispersed | |
Lsi11g00024 | Lsi-Chr11:252005 | Lsi11g01574 | Lsi-Chr11:24075599 | 2.42E-118 | dispersed | |
Lsi11g00023 | Lsi-Chr11:245729 | Lsi11g00024 | Lsi-Chr11:252005 | 1.43E-180 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi11g00024 | K00430 | - | csv:116403994 | 563.148 |