Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi11g00240 ATGGCCGACGCCACCGTGCCGGAAACCGACTCCGGTGCCACCAATTCCTCGTCCTCGTCTTCCTCCTCGACGTCATGTTCGATCTCCTCCCCATCGAAACAAGGCGGTGGCCGAACCTCGAAGCGCGGTAGAGAAAGTAGCAACAATAGTAATCATCCAAGTTACCGCGGCGTCCGAATGAGGGCGTGGGGCAAATGGGTGTCGGAAATTCGAGAGCCAAAGAAAAAGAGTCGGATCTGGCTCGGCACCTTCGCCACACCCGACATGGCGGCACGTGCTCACGACGTAGCCGCCCTTACTATCAAAGGCAATTCCGCCATCCTCAATTTCCCTGAACTCGCTGCCTCATTGCCTCGCCCCGCCTCTTCGTCCCCTCGTGACGTTCAATCCGCCGCCGCCCTTGCCGCTTCAATGCAACTTCCTGACGTTGTCTCACCTCCACCACCGCCACCACCACCACCCTCGTCGCCTCCGTTTTCGTCGTCGTCCGAGTTGGACGAGTCGACGCCGGAGGAATTGAGTGAAATTGTGGTGTTGCCGAGTTTGGGAACGGGGTATGAGGAATCGGCCGAGTCGGTGACTGAGTTCGTGTTTGACGAGTGGCAATATAACTATGGGCCATGGGATCAACAAAATCAAAGCTCAAAAGAAGAAGAAGAAGAAGCTTATGAGTACTTTATAGATCAAATGGCAATGGCGGAAAGAGAGTGTGTGATTCCCACTGCATTATTTCAACCTTTACCTTTCTCGTGGTAA 756 54.5 MADATVPETDSGATNSSSSSSSSTSCSISSPSKQGGGRTSKRGRESSNNSNHPSYRGVRMRAWGKWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASLPRPASSSPRDVQSAAALAASMQLPDVVSPPPPPPPPPSSPPFSSSSELDESTPEELSEIVVLPSLGTGYEESAESVTEFVFDEWQYNYGPWDQQNQSSKEEEEEAYEYFIDQMAMAERECVIPTALFQPLPFSW 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2429121 2429876 - Lsi11G002400.1 Lsi11g00240 673407

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi11g00240 251 MobiDBLite consensus disorder prediction 142 159 - -
Lsi11g00240 251 CDD AP2 53 113 IPR001471 GO:0003700|GO:0006355
Lsi11g00240 251 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 234 - -
Lsi11g00240 251 SMART rav1_2 54 117 IPR001471 GO:0003700|GO:0006355
Lsi11g00240 251 MobiDBLite consensus disorder prediction 140 176 - -
Lsi11g00240 251 SUPERFAMILY DNA-binding domain 54 112 IPR016177 GO:0003677
Lsi11g00240 251 Gene3D AP2/ERF domain 54 112 IPR036955 GO:0003700|GO:0006355
Lsi11g00240 251 MobiDBLite consensus disorder prediction 8 55 - -
Lsi11g00240 251 ProSiteProfiles AP2/ERF domain profile. 54 111 IPR001471 GO:0003700|GO:0006355
Lsi11g00240 251 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 14 234 - -
Lsi11g00240 251 Coils Coil 216 236 - -
Lsi11g00240 251 MobiDBLite consensus disorder prediction 1 58 - -
Lsi11g00240 251 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Lsi11g00240 251 PRINTS Ethylene responsive element binding protein signature 77 93 IPR001471 GO:0003700|GO:0006355
Lsi11g00240 251 Pfam AP2 domain 53 103 IPR001471 GO:0003700|GO:0006355
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi11g00240 K09286 EREBP; EREBP-like factor - csv:101212945 363.229
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi01g00965 Lsi-Chr1:7834851 Lsi11g00240 Lsi-Chr11:2429121 1.40E-25 dispersed
Lsi08g00071 Lsi-Chr8:1519264 Lsi11g00240 Lsi-Chr11:2429121 2.90E-30 dispersed
Lsi08g00077 Lsi-Chr8:1652979 Lsi11g00240 Lsi-Chr11:2429121 2.25E-35 dispersed
Lsi08g01086 Lsi-Chr8:19470778 Lsi11g00240 Lsi-Chr11:2429121 2.02E-51 dispersed
Lsi09g00596 Lsi-Chr9:6458757 Lsi11g00240 Lsi-Chr11:2429121 3.56E-34 dispersed
Lsi09g01688 Lsi-Chr9:25348235 Lsi11g00240 Lsi-Chr11:2429121 7.50E-41 dispersed
Lsi07g01282 Lsi-Chr7:18716823 Lsi11g00240 Lsi-Chr11:2429121 1.44E-48 transposed
Lsi08g00181 Lsi-Chr8:3908631 Lsi11g00240 Lsi-Chr11:2429121 5.77E-31 transposed
Lsi05g02189 Lsi-Chr5:28515186 Lsi11g00240 Lsi-Chr11:2429121 1.75E-41 transposed
Lsi11g00240 Lsi-Chr11:2429121 Lsi06g00816 Lsi-Chr6:17232586 1.28E-68 wgd
Lsi11g00240 Lsi-Chr11:2429121 Lsi07g00520 Lsi-Chr7:5483691 1.68E-44 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lsi06g01180 . 135 320 AP2-EREBP Transcription Factor Family AT1G72570 86.0 1.8e-92 336.7
Lsi10g01048 . 183 368 AP2-EREBP Transcription Factor Family AT1G72570 81.0 2.2e-87 319.7
Lsi05g00782 . 239 421 AP2-EREBP Transcription Factor Family AT1G72570 78.0 1.6e-82 303.5
Lsi02g02647 . 36 211 AP2-EREBP Transcription Factor Family AT1G72570 66.5 3.1e-65 246.1
Lsi08g01547 CCT 252 460 AP2-EREBP Transcription Factor Family AT1G72570 52.1 1.9e-54 210.3
Lsi11g00935 . 294 459 AP2-EREBP Transcription Factor Family AT1G72570 58.3 1.8e-52 203.8
Lsi04g00187 . 215 370 AP2-EREBP Transcription Factor Family AT1G72570 59.9 1.7e-47 187.2
Lsi06g01084 CCT 17 168 AP2-EREBP Transcription Factor Family AT1G72570 63.2 4.7e-45 179.1
Lsi10g01313 . 154 310 AP2-EREBP Transcription Factor Family AT1G72570 53.6 2.0e-43 173.7
Lsi07g00616 . 4 100 AP2-EREBP Transcription Factor Family AT1G72570 87.6 4.4e-43 172.6
Lsi01g00966 CCT 141 298 AP2-EREBP Transcription Factor Family AT1G72570 52.7 1.7e-42 170.6
Lsi10g00523 CCT 139 296 AP2-EREBP Transcription Factor Family AT1G72570 50.9 1.4e-41 167.5
Lsi03g02059 . 157 313 AP2-EREBP Transcription Factor Family AT1G72570 51.2 2.4e-41 166.8
Lsi03g01559 . 130 261 AP2-EREBP Transcription Factor Family AT1G72570 56.8 5.5e-38 155.6
Lsi10g01048 . 129 380 AP2-EREBP Transcription Factor Family AT5G17430 71.8 1.4e-99 360.5
Lsi06g01180 . 135 324 AP2-EREBP Transcription Factor Family AT5G17430 87.4 5.6e-96 348.6
Lsi05g00782 . 230 459 AP2-EREBP Transcription Factor Family AT5G17430 73.5 3.4e-93 339.3
Lsi02g02647 . 28 211 AP2-EREBP Transcription Factor Family AT5G17430 64.2 2.1e-66 250.4
Lsi08g01547 CCT 299 487 AP2-EREBP Transcription Factor Family AT5G17430 52.2 7.2e-51 198.7
Lsi04g00187 . 215 343 AP2-EREBP Transcription Factor Family AT5G17430 67.4 1.1e-46 184.9
Lsi06g01084 CCT 21 168 AP2-EREBP Transcription Factor Family AT5G17430 64.2 7.0e-46 182.2
Lsi07g00615 . 195 303 AP2-EREBP Transcription Factor Family AT5G17430 75.4 1.4e-43 174.5
Lsi01g00966 CCT 132 297 AP2-EREBP Transcription Factor Family AT5G17430 50.8 1.4e-41 167.9
Lsi03g01559 . 130 277 AP2-EREBP Transcription Factor Family AT5G17430 53.4 6.3e-39 159.1
Lsi07g00616 . 3 99 AP2-EREBP Transcription Factor Family AT5G17430 81.4 3.5e-37 153.3
Lsi06g01180 . 82 396 AP2-EREBP Transcription Factor Family AT5G57390 65.5 7.0e-108 387.9
Lsi10g01048 . 182 372 AP2-EREBP Transcription Factor Family AT5G57390 88.1 1.9e-97 353.2
Lsi05g00782 . 187 426 AP2-EREBP Transcription Factor Family AT5G57390 70.7 4.0e-95 345.5
Lsi02g02647 . 46 211 AP2-EREBP Transcription Factor Family AT5G57390 70.4 1.3e-66 250.8
Lsi11g00935 . 297 470 AP2-EREBP Transcription Factor Family AT5G57390 59.9 6.7e-58 221.9
Lsi04g00187 . 215 343 AP2-EREBP Transcription Factor Family AT5G57390 69.0 4.3e-49 192.6
Lsi06g01084 CCT 14 168 AP2-EREBP Transcription Factor Family AT5G57390 61.9 7.7e-46 181.8
Lsi07g00615 . 184 303 AP2-EREBP Transcription Factor Family AT5G57390 70.9 1.7e-45 180.6
Lsi10g00523 CCT 130 296 AP2-EREBP Transcription Factor Family AT5G57390 50.6 3.9e-42 169.5
Lsi03g01559 . 130 261 AP2-EREBP Transcription Factor Family AT5G57390 58.3 2.4e-39 160.2
Lsi07g00616 . 3 117 AP2-EREBP Transcription Factor Family AT5G57390 73.9 9.1e-39 158.3
Lsi05g00782 . 113 527 AP2-EREBP Transcription Factor Family AT5G10510 60.5 5.6e-139 491.5
Lsi06g01180 . 135 340 AP2-EREBP Transcription Factor Family AT5G10510 81.1 6.9e-97 351.7
Lsi10g01048 . 178 390 AP2-EREBP Transcription Factor Family AT5G10510 79.3 3.8e-95 345.9
Lsi02g02647 . 42 211 AP2-EREBP Transcription Factor Family AT5G10510 65.9 2.9e-63 240.0
Lsi11g00935 . 298 462 AP2-EREBP Transcription Factor Family AT5G10510 62.1 1.8e-57 220.7
Lsi04g00187 . 215 343 AP2-EREBP Transcription Factor Family AT5G10510 64.3 6.2e-45 179.1
Lsi06g01084 CCT 14 168 AP2-EREBP Transcription Factor Family AT5G10510 58.1 1.7e-42 171.0
Lsi10g01313 . 154 310 AP2-EREBP Transcription Factor Family AT5G10510 53.0 2.2e-42 170.6
Lsi01g00966 CCT 141 300 AP2-EREBP Transcription Factor Family AT5G10510 52.6 1.9e-41 167.5
Lsi07g00615 . 201 303 AP2-EREBP Transcription Factor Family AT5G10510 72.2 3.0e-39 160.2
Lsi03g01559 . 130 261 AP2-EREBP Transcription Factor Family AT5G10510 54.5 2.3e-36 150.6
Lsi05g00782 . 113 527 AP2-EREBP Transcription Factor Family AT5G65510 58.3 8.0e-120 427.6
Lsi06g01180 . 136 332 AP2-EREBP Transcription Factor Family AT5G65510 81.7 4.7e-96 348.6
Lsi10g01048 . 185 386 AP2-EREBP Transcription Factor Family AT5G65510 78.5 2.2e-93 339.7
Lsi02g02647 . 46 211 AP2-EREBP Transcription Factor Family AT5G65510 68.0 2.1e-64 243.4
Lsi11g00935 . 299 460 AP2-EREBP Transcription Factor Family AT5G65510 58.5 1.0e-53 208.0
Lsi08g01547 CCT 300 463 AP2-EREBP Transcription Factor Family AT5G65510 52.3 6.9e-47 185.3
Lsi04g00187 . 215 343 AP2-EREBP Transcription Factor Family AT5G65510 66.7 2.6e-46 183.3
Lsi06g01084 CCT 14 168 AP2-EREBP Transcription Factor Family AT5G65510 58.7 2.7e-43 173.3
Lsi10g01313 . 154 310 AP2-EREBP Transcription Factor Family AT5G65510 54.2 7.9e-43 171.8
Lsi01g00966 CCT 141 300 AP2-EREBP Transcription Factor Family AT5G65510 53.2 1.8e-42 170.6
Lsi03g02059 . 157 316 AP2-EREBP Transcription Factor Family AT5G65510 52.6 6.7e-42 168.7
Lsi07g00615 . 202 303 AP2-EREBP Transcription Factor Family AT5G65510 72.0 5.3e-39 159.1
Lsi03g01559 . 130 261 AP2-EREBP Transcription Factor Family AT5G65510 56.1 5.0e-37 152.5
Lsi07g00616 . 3 118 AP2-EREBP Transcription Factor Family AT5G65510 68.1 1.4e-36 151.0
Lsi06g01180 . 135 325 AP2-EREBP Transcription Factor Family AT4G37750 83.8 4.0e-92 335.9
Lsi10g01048 . 181 377 AP2-EREBP Transcription Factor Family AT4G37750 78.0 3.9e-87 319.3
Lsi05g00782 . 239 430 AP2-EREBP Transcription Factor Family AT4G37750 75.4 2.9e-82 303.1
Lsi02g02647 . 24 211 AP2-EREBP Transcription Factor Family AT4G37750 64.4 1.3e-63 241.1
Lsi11g00935 . 291 460 AP2-EREBP Transcription Factor Family AT4G37750 58.1 1.3e-53 208.0
Lsi04g00187 . 215 354 AP2-EREBP Transcription Factor Family AT4G37750 63.1 5.1e-47 186.0
Lsi06g01084 CCT 34 168 AP2-EREBP Transcription Factor Family AT4G37750 65.2 1.5e-43 174.5
Lsi01g00966 CCT 141 298 AP2-EREBP Transcription Factor Family AT4G37750 53.3 7.6e-43 172.2
Lsi07g00615 . 196 303 AP2-EREBP Transcription Factor Family AT4G37750 75.2 1.7e-42 171.0
Lsi10g00523 CCT 139 296 AP2-EREBP Transcription Factor Family AT4G37750 51.5 6.5e-42 169.1
Lsi07g00616 . 3 94 AP2-EREBP Transcription Factor Family AT4G37750 85.9 1.2e-40 164.9
Lsi03g01559 . 130 277 AP2-EREBP Transcription Factor Family AT4G37750 52.0 3.7e-37 153.3
Lsi10g00523 CCT 1 491 AP2-EREBP Transcription Factor Family AT4G36920 50.6 1.5e-110 396.7
Lsi01g00966 CCT 64 302 AP2-EREBP Transcription Factor Family AT4G36920 75.1 2.5e-102 369.4
Lsi10g01313 . 73 333 AP2-EREBP Transcription Factor Family AT4G36920 65.3 4.8e-93 338.6
Lsi03g02059 . 104 335 AP2-EREBP Transcription Factor Family AT4G36920 69.2 7.7e-91 331.3
Lsi01g01365 . 4 151 AP2-EREBP Transcription Factor Family AT4G36920 69.1 9.8e-54 208.0
Lsi06g01180 . 144 320 AP2-EREBP Transcription Factor Family AT4G36920 53.1 2.0e-43 173.7
Lsi02g02647 . 41 211 AP2-EREBP Transcription Factor Family AT4G36920 53.2 4.3e-41 166.0
Lsi10g01048 . 193 369 AP2-EREBP Transcription Factor Family AT4G36920 50.3 1.2e-40 164.5
Lsi05g00782 . 248 421 AP2-EREBP Transcription Factor Family AT4G36920 51.7 2.1e-40 163.7
Lsi07g01273 . 10 248 AP2-EREBP Transcription Factor Family AT4G17500 59.7 1.8e-69 259.6
Lsi09g00458 . 1 247 AP2-EREBP Transcription Factor Family AT4G17500 55.9 2.2e-67 252.7
Lsi09g00458 . 41 214 AP2-EREBP Transcription Factor Family AT2G44840 54.5 2.0e-42 169.5
Lsi07g01273 . 39 225 AP2-EREBP Transcription Factor Family AT2G44840 50.3 1.6e-39 159.8
Lsi05g01725 . 70 221 AP2-EREBP Transcription Factor Family AT2G31230 51.6 8.0e-37 151.0
Lsi07g01273 . 2 220 AP2-EREBP Transcription Factor Family AT5G47220 57.0 4.2e-54 208.4
Lsi04g02049 . 18 195 AP2-EREBP Transcription Factor Family AT3G15210 50.7 3.5e-39 158.7
Lsi05g01266 . 1 211 AP2-EREBP Transcription Factor Family AT4G25490 60.5 4.8e-62 234.6
Lsi09g00596 . 5 214 AP2-EREBP Transcription Factor Family AT4G25490 57.3 3.0e-56 215.3
Lsi09g00310 . 46 229 AP2-EREBP Transcription Factor Family AT4G25490 54.6 1.0e-48 190.3
Lsi05g01266 . 1 211 AP2-EREBP Transcription Factor Family AT4G25470 58.6 3.5e-60 228.4
Lsi09g00596 . 28 214 AP2-EREBP Transcription Factor Family AT4G25470 60.3 1.4e-53 206.5
Lsi09g00310 . 46 229 AP2-EREBP Transcription Factor Family AT4G25470 54.9 1.3e-49 193.4
Lsi05g01266 . 1 211 AP2-EREBP Transcription Factor Family AT4G25480 61.7 7.1e-61 230.7
Lsi09g00596 . 28 214 AP2-EREBP Transcription Factor Family AT4G25480 61.7 4.4e-55 211.5
Lsi09g00310 . 46 229 AP2-EREBP Transcription Factor Family AT4G25480 59.4 3.5e-52 201.8
Lsi03g00291 CCT 5 229 AP2-EREBP Transcription Factor Family AT5G05410 52.7 6.2e-47 184.9
Lsi01g01580 . 2 143 AP2-EREBP Transcription Factor Family AT5G05410 57.7 1.2e-37 154.1
Lsi03g00291 CCT 19 194 AP2-EREBP Transcription Factor Family AT3G11020 53.9 1.0e-42 171.0
Lsi01g01580 . 1 143 AP2-EREBP Transcription Factor Family AT3G11020 57.4 6.4e-37 151.8
Lsi05g01725 . 37 223 AP2-EREBP Transcription Factor Family AT3G23240 60.1 4.2e-53 204.9
Lsi09g01239 . 1 232 AP2-EREBP Transcription Factor Family AT3G23240 53.6 4.3e-50 194.9
Lsi02g02215 CCT 96 226 AP2-EREBP Transcription Factor Family AT3G23240 66.2 8.2e-41 164.1
Lsi05g01011 CCT 82 221 AP2-EREBP Transcription Factor Family AT3G23240 62.7 1.8e-40 162.9
Lsi01g00965 CCT 9 162 AP2-EREBP Transcription Factor Family AT4G36900 57.0 1.2e-43 173.3
Lsi07g01282 . 29 192 AP2-EREBP Transcription Factor Family AT4G16750 56.5 1.3e-39 159.8
Lsi10g00883 . 166 334 AP2-EREBP Transcription Factor Family AT2G20880 51.6 4.6e-43 172.2
Lsi03g00291 CCT 23 142 AP2-EREBP Transcription Factor Family AT2G40350 70.2 4.3e-42 167.9
Lsi08g00417 . 17 207 AP2-EREBP Transcription Factor Family AT1G44830 50.5 9.1e-37 150.6
Lsi04g01710 CCT 15 172 AP2-EREBP Transcription Factor Family AT1G75490 55.2 2.8e-43 172.2
Lsi08g01358 CCT 15 219 AP2-EREBP Transcription Factor Family AT1G75490 50.7 2.3e-37 152.5
Lsi05g01266 . 4 211 AP2-EREBP Transcription Factor Family AT5G51990 57.9 1.6e-60 229.6
Lsi09g00596 . 3 214 AP2-EREBP Transcription Factor Family AT5G51990 55.8 7.1e-56 214.2
Lsi09g00310 . 46 229 AP2-EREBP Transcription Factor Family AT5G51990 55.4 1.7e-49 193.0
Lsi09g00309 . 5 173 AP2-EREBP Transcription Factor Family AT1G12630 58.8 1.0e-42 170.2
Lsi07g01412 . 2 168 AP2-EREBP Transcription Factor Family AT1G12630 56.7 2.2e-37 152.5
Lsi03g01929 CCT,ECH 6 180 AP2-EREBP Transcription Factor Family AT2G36450 63.9 2.6e-48 188.7
Lsi08g00953 . 86 253 AP2-EREBP Transcription Factor Family AT4G39780 56.5 8.9e-45 177.6
Lsi08g00417 . 21 206 AP2-EREBP Transcription Factor Family AT1G21910 50.5 6.9e-38 154.5
Lsi05g00571 . 1 216 AP2-EREBP Transcription Factor Family AT1G50640 53.0 5.7e-53 204.5
Lsi11g01667 CCT,ECH 1 212 AP2-EREBP Transcription Factor Family AT1G50640 50.9 6.3e-44 174.5
Lsi05g00571 . 1 216 AP2-EREBP Transcription Factor Family AT3G20310 55.5 1.3e-55 213.4
Lsi04g02091 . 26 207 AP2-EREBP Transcription Factor Family AT5G25190 61.5 3.4e-56 214.9
Lsi08g01234 . 1 171 AP2-EREBP Transcription Factor Family AT5G25190 63.2 1.4e-54 209.5
Lsi02g02675 CCT 33 225 AP2-EREBP Transcription Factor Family AT5G25190 54.4 1.7e-47 186.0
Lsi07g00438 CCT 1 164 AP2-EREBP Transcription Factor Family AT5G25190 53.7 2.3e-41 165.6
Lsi06g01687 . 571 723 AP2-EREBP Transcription Factor Family AT5G61890 59.4 2.7e-40 162.5
Lsi03g01559 . 1 483 AP2-EREBP Transcription Factor Family AT2G41710 53.9 7.8e-126 447.6
Lsi06g01180 . 140 271 AP2-EREBP Transcription Factor Family AT2G41710 63.6 3.0e-45 179.9
Lsi05g00782 . 244 372 AP2-EREBP Transcription Factor Family AT2G41710 61.4 3.5e-41 166.4
Lsi10g01048 . 189 317 AP2-EREBP Transcription Factor Family AT2G41710 58.3 2.9e-40 163.3
Lsi02g02647 . 153 358 AP2-EREBP Transcription Factor Family AT1G16060 50.5 7.4e-38 154.1
Lsi02g02647 . 84 348 AP2-EREBP Transcription Factor Family AT1G79700 56.2 3.7e-68 255.0
Lsi06g01084 CCT 33 310 AP2-EREBP Transcription Factor Family AT1G79700 52.5 1.1e-62 236.9
Lsi04g00187 . 217 344 AP2-EREBP Transcription Factor Family AT1G79700 79.7 8.1e-55 210.7
Lsi10g01048 . 230 357 AP2-EREBP Transcription Factor Family AT1G79700 68.8 1.9e-48 189.5
Lsi06g01180 . 183 311 AP2-EREBP Transcription Factor Family AT1G79700 68.2 1.9e-48 189.5
Lsi05g00782 . 285 412 AP2-EREBP Transcription Factor Family AT1G79700 70.3 4.8e-47 184.9
Lsi01g00869 . 457 617 AP2-EREBP Transcription Factor Family AT1G79700 54.7 3.0e-41 165.6
Lsi03g01559 . 1 483 AP2-EREBP Transcription Factor Family AT2G41710 53.9 7.8e-126 447.6
Lsi06g01180 . 140 271 AP2-EREBP Transcription Factor Family AT2G41710 63.6 3.0e-45 179.9
Lsi05g00782 . 244 372 AP2-EREBP Transcription Factor Family AT2G41710 61.4 3.5e-41 166.4
Lsi10g01048 . 189 317 AP2-EREBP Transcription Factor Family AT2G41710 58.3 2.9e-40 163.3
Lsi05g00782 . 113 527 AP2-EREBP Transcription Factor Family AT5G65510 58.3 8.0e-120 427.6
Lsi06g01180 . 136 332 AP2-EREBP Transcription Factor Family AT5G65510 81.7 4.7e-96 348.6
Lsi10g01048 . 185 386 AP2-EREBP Transcription Factor Family AT5G65510 78.5 2.2e-93 339.7
Lsi02g02647 . 46 211 AP2-EREBP Transcription Factor Family AT5G65510 68.0 2.1e-64 243.4
Lsi11g00935 . 299 460 AP2-EREBP Transcription Factor Family AT5G65510 58.5 1.0e-53 208.0
Lsi08g01547 CCT 300 463 AP2-EREBP Transcription Factor Family AT5G65510 52.3 6.9e-47 185.3
Lsi04g00187 . 215 343 AP2-EREBP Transcription Factor Family AT5G65510 66.7 2.6e-46 183.3
Lsi06g01084 CCT 14 168 AP2-EREBP Transcription Factor Family AT5G65510 58.7 2.7e-43 173.3
Lsi10g01313 . 154 310 AP2-EREBP Transcription Factor Family AT5G65510 54.2 7.9e-43 171.8
Lsi01g00966 CCT 141 300 AP2-EREBP Transcription Factor Family AT5G65510 53.2 1.8e-42 170.6
Lsi03g02059 . 157 316 AP2-EREBP Transcription Factor Family AT5G65510 52.6 6.7e-42 168.7
Lsi07g00615 . 202 303 AP2-EREBP Transcription Factor Family AT5G65510 72.0 5.3e-39 159.1
Lsi03g01559 . 130 261 AP2-EREBP Transcription Factor Family AT5G65510 56.1 5.0e-37 152.5
Lsi07g00616 . 3 118 AP2-EREBP Transcription Factor Family AT5G65510 68.1 1.4e-36 151.0
Lsi05g02189 . 47 224 AP2-EREBP Transcription Factor Family AT2G44940 53.0 1.2e-42 170.6
Lsi01g00965 CCT 7 164 AP2-EREBP Transcription Factor Family AT2G23340 63.1 3.2e-43 171.8
Lsi06g00359 . 21 209 AP2-EREBP Transcription Factor Family AT1G19210 51.6 8.8e-44 173.7
Lsi11g01541 . 166 353 AP2-EREBP Transcription Factor Family AT4G28140 50.8 8.4e-41 164.5
Lsi06g01687 . 571 720 AP2-EREBP Transcription Factor Family AT5G07310 56.0 2.3e-37 152.9
Lsi09g00192 . 12 175 AP2-EREBP Transcription Factor Family AT4G27950 53.4 1.2e-38 157.5
Lsi01g00965 CCT 1 166 AP2-EREBP Transcription Factor Family AT5G67190 56.5 5.5e-46 181.0
Lsi04g01534 . 23 152 AP2-EREBP Transcription Factor Family AT5G67190 51.8 8.5e-39 157.1
Lsi07g01282 . 39 198 AP2-EREBP Transcription Factor Family AT3G60490 52.0 1.3e-37 153.7
Lsi09g00310 . 41 229 AP2-EREBP Transcription Factor Family AT1G63030 52.9 4.0e-49 191.4
Lsi05g01266 . 27 211 AP2-EREBP Transcription Factor Family AT1G63030 54.3 1.2e-48 189.9
Lsi09g00596 . 23 214 AP2-EREBP Transcription Factor Family AT1G63030 52.1 1.7e-47 186.0
Lsi06g00816 . 37 211 AP2-EREBP Transcription Factor Family AT5G11590 67.4 1.0e-52 203.8
Lsi04g02331 . 36 200 AP2-EREBP Transcription Factor Family AT5G11590 60.2 3.8e-52 201.8
Lsi08g01086 . 42 199 AP2-EREBP Transcription Factor Family AT5G11590 66.5 3.0e-49 192.2
Lsi11g00240 . 40 215 AP2-EREBP Transcription Factor Family AT5G11590 59.8 2.1e-42 169.5
Lsi07g00520 . 9 175 AP2-EREBP Transcription Factor Family AT5G11590 54.5 4.0e-41 165.2
Lsi02g02820 . 23 154 AP2-EREBP Transcription Factor Family AT5G11590 56.9 4.4e-40 161.8
Lsi08g00077 . 4 150 AP2-EREBP Transcription Factor Family AT1G33760 62.7 4.6e-45 177.9
Lsi08g00071 . 16 183 AP2-EREBP Transcription Factor Family AT1G33760 55.6 9.1e-41 163.7
Lsi04g02331 . 36 206 AP2-EREBP Transcription Factor Family AT4G32800 50.8 4.7e-44 174.9
Lsi08g01086 . 43 221 AP2-EREBP Transcription Factor Family AT4G32800 51.0 5.8e-42 167.9
Lsi06g00816 . 47 211 AP2-EREBP Transcription Factor Family AT4G32800 55.9 2.4e-40 162.5
Lsi02g02820 . 21 133 AP2-EREBP Transcription Factor Family AT4G32800 66.4 9.5e-37 150.6
Lsi07g00520 . 30 169 AP2-EREBP Transcription Factor Family AT4G32800 51.4 9.5e-37 150.6
Lsi06g00816 . 56 212 AP2-EREBP Transcription Factor Family AT1G77200 65.9 2.2e-42 169.5
Lsi04g02331 . 23 193 AP2-EREBP Transcription Factor Family AT1G77200 53.3 2.0e-40 162.9
Lsi11g00240 . 53 208 AP2-EREBP Transcription Factor Family AT1G77200 59.2 3.5e-40 162.2
Lsi08g01086 . 43 191 AP2-EREBP Transcription Factor Family AT1G77200 58.5 3.9e-39 158.7
Lsi08g00071 . 15 184 AP2-EREBP Transcription Factor Family AT1G71450 61.0 9.6e-51 196.8
Lsi08g00077 . 5 154 AP2-EREBP Transcription Factor Family AT1G71450 53.1 4.6e-37 151.4
Lsi09g00596 . 22 214 AP2-EREBP Transcription Factor Family AT1G12610 52.7 3.4e-44 175.3
Lsi10g01048 . 4 599 AP2-EREBP Transcription Factor Family AT3G20840 56.3 7.7e-155 544.3
Lsi06g01180 . 135 332 AP2-EREBP Transcription Factor Family AT3G20840 85.4 3.5e-99 359.4
Lsi05g00782 . 113 440 AP2-EREBP Transcription Factor Family AT3G20840 59.3 2.1e-96 350.1
Lsi02g02647 . 42 211 AP2-EREBP Transcription Factor Family AT3G20840 65.9 9.6e-65 245.0
Lsi11g00935 . 295 463 AP2-EREBP Transcription Factor Family AT3G20840 64.5 2.6e-62 236.9
Lsi08g01547 CCT 299 466 AP2-EREBP Transcription Factor Family AT3G20840 53.5 1.5e-49 194.5
Lsi04g00187 . 215 354 AP2-EREBP Transcription Factor Family AT3G20840 62.1 1.4e-47 188.0
Lsi06g01084 CCT 14 168 AP2-EREBP Transcription Factor Family AT3G20840 58.7 1.9e-44 177.6
Lsi10g01313 . 154 310 AP2-EREBP Transcription Factor Family AT3G20840 52.4 1.0e-42 171.8
Lsi01g00966 CCT 141 298 AP2-EREBP Transcription Factor Family AT3G20840 52.1 1.1e-41 168.3
Lsi03g01559 . 130 261 AP2-EREBP Transcription Factor Family AT3G20840 56.1 5.3e-39 159.5
Lsi07g00616 . 3 94 AP2-EREBP Transcription Factor Family AT3G20840 86.0 3.4e-38 156.8
Lsi10g01048 . 4 599 AP2-EREBP Transcription Factor Family AT1G51190 57.2 5.2e-164 574.7
Lsi06g01180 . 135 332 AP2-EREBP Transcription Factor Family AT1G51190 86.9 3.1e-100 362.8
Lsi05g00782 . 113 494 AP2-EREBP Transcription Factor Family AT1G51190 53.6 8.8e-95 344.7
Lsi02g02647 . 46 211 AP2-EREBP Transcription Factor Family AT1G51190 68.6 8.6e-66 248.4
Lsi11g00935 . 293 463 AP2-EREBP Transcription Factor Family AT1G51190 64.4 2.6e-62 236.9
Lsi04g00187 . 215 343 AP2-EREBP Transcription Factor Family AT1G51190 66.7 6.2e-48 189.1
Lsi06g01084 CCT 14 176 AP2-EREBP Transcription Factor Family AT1G51190 59.1 5.8e-46 182.6
Lsi07g00615 . 195 303 AP2-EREBP Transcription Factor Family AT1G51190 75.4 1.9e-44 177.6
Lsi10g01313 . 154 310 AP2-EREBP Transcription Factor Family AT1G51190 53.6 1.2e-43 174.9
Lsi01g00966 CCT 141 298 AP2-EREBP Transcription Factor Family AT1G51190 53.3 1.7e-42 171.0
Lsi03g01559 . 130 261 AP2-EREBP Transcription Factor Family AT1G51190 59.1 1.2e-40 164.9
Lsi07g00616 . 3 94 AP2-EREBP Transcription Factor Family AT1G51190 84.9 7.6e-38 155.6
Lsi01g00965 CCT 1 166 AP2-EREBP Transcription Factor Family AT3G50260 57.2 1.8e-42 169.1
Lsi04g01534 . 22 152 AP2-EREBP Transcription Factor Family AT3G50260 61.8 7.5e-41 163.7
Lsi09g00309 . 8 173 AP2-EREBP Transcription Factor Family AT5G52020 55.7 3.3e-40 162.2
Lsi07g01412 . 2 168 AP2-EREBP Transcription Factor Family AT5G52020 53.4 1.4e-38 156.8
Lsi04g02353 . 150 363 AP2-EREBP Transcription Factor Family AT1G22190 59.3 2.9e-53 205.7
Lsi01g00754 . 130 342 AP2-EREBP Transcription Factor Family AT1G22190 50.9 9.5e-44 174.1
Lsi04g02133 . 1 180 AP2-EREBP Transcription Factor Family AT5G25390 63.7 3.1e-60 228.4
Lsi06g00969 CCT,ECH 1 196 AP2-EREBP Transcription Factor Family AT5G25390 51.5 3.9e-47 184.9
Lsi04g02133 . 1 178 AP2-EREBP Transcription Factor Family AT5G11190 62.4 4.0e-60 228.0
Lsi11g00320 CCT,ECH 1 214 AP2-EREBP Transcription Factor Family AT5G11190 51.4 1.7e-50 196.1
Lsi06g00969 CCT,ECH 1 196 AP2-EREBP Transcription Factor Family AT5G11190 50.5 5.4e-49 191.0
Lsi04g00819 . 2 236 AP2-EREBP Transcription Factor Family AT3G54990 53.4 1.3e-50 196.8
Lsi10g01313 . 144 263 AP2-EREBP Transcription Factor Family AT3G54990 76.7 2.2e-50 196.1
Lsi01g00966 CCT 131 250 AP2-EREBP Transcription Factor Family AT3G54990 75.0 1.1e-49 193.7
Lsi10g00523 CCT 129 248 AP2-EREBP Transcription Factor Family AT3G54990 73.3 9.3e-49 190.7
Lsi03g02059 . 147 266 AP2-EREBP Transcription Factor Family AT3G54990 75.0 2.7e-48 189.1
Lsi10g01313 . 145 251 AP2-EREBP Transcription Factor Family AT2G39250 78.5 7.8e-45 177.6
Lsi01g00966 CCT 132 238 AP2-EREBP Transcription Factor Family AT2G39250 76.6 3.9e-44 175.3
Lsi10g00523 CCT 130 236 AP2-EREBP Transcription Factor Family AT2G39250 75.7 1.5e-43 173.3
Lsi03g02059 . 148 254 AP2-EREBP Transcription Factor Family AT2G39250 75.7 1.2e-42 170.2
Lsi04g02331 . 36 193 AP2-EREBP Transcription Factor Family AT5G25810 62.0 5.5e-45 177.9
Lsi06g00816 . 32 222 AP2-EREBP Transcription Factor Family AT5G25810 56.6 4.4e-42 168.3
Lsi08g01086 . 42 200 AP2-EREBP Transcription Factor Family AT5G25810 59.9 1.3e-41 166.8
Lsi10g01313 . 1 272 AP2-EREBP Transcription Factor Family AT2G28550 66.6 2.1e-94 342.4
Lsi03g02059 . 1 275 AP2-EREBP Transcription Factor Family AT2G28550 55.4 3.8e-72 268.5
Lsi01g00966 CCT 69 259 AP2-EREBP Transcription Factor Family AT2G28550 67.7 1.9e-68 256.1
Lsi10g00523 CCT 77 257 AP2-EREBP Transcription Factor Family AT2G28550 68.4 9.7e-68 253.8
Lsi04g00819 . 13 250 AP2-EREBP Transcription Factor Family AT2G28550 60.9 9.1e-66 247.3
Lsi01g00966 CCT 128 294 AP2-EREBP Transcription Factor Family AT5G60120 66.5 2.1e-57 220.3
Lsi04g00819 . 22 249 AP2-EREBP Transcription Factor Family AT5G60120 56.4 3.7e-54 209.5
Lsi11g00320 CCT,ECH 1 216 AP2-EREBP Transcription Factor Family AT1G15360 56.6 1.2e-54 209.9
Lsi04g02133 . 1 178 AP2-EREBP Transcription Factor Family AT1G15360 53.7 2.9e-53 205.3
Lsi06g00969 CCT,ECH 1 198 AP2-EREBP Transcription Factor Family AT1G15360 55.0 1.1e-52 203.4
Lsi07g00465 . 1 154 AP2-EREBP Transcription Factor Family AT1G15360 50.8 5.0e-37 151.4
Lsi04g00187 . 215 469 AP2-EREBP Transcription Factor Family AT3G54320 54.8 1.6e-65 246.9
Lsi02g02647 . 84 216 AP2-EREBP Transcription Factor Family AT3G54320 78.9 1.8e-56 216.9
Lsi06g01084 CCT 33 173 AP2-EREBP Transcription Factor Family AT3G54320 76.6 1.3e-54 210.7
Lsi06g01180 . 181 311 AP2-EREBP Transcription Factor Family AT3G54320 71.8 3.2e-50 196.1
Lsi05g00782 . 285 423 AP2-EREBP Transcription Factor Family AT3G54320 66.2 1.2e-47 187.6
Lsi10g01048 . 230 357 AP2-EREBP Transcription Factor Family AT3G54320 67.2 1.7e-46 183.7
Lsi01g00869 . 455 617 AP2-EREBP Transcription Factor Family AT3G54320 57.1 5.0e-43 172.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012545 0 1 0 0 0 1 2 1 1 1 1 1 2 1 1 1 1 0 2 1 1 1 1 1 1 1 1 3 1 0 29
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26136 PF00847 AP2 7.30E-13 CL0081 Lsi TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi11g00240 Lsi_Chr11 FPKM 0.022738 0.0 0.0 0.0 0.120072 0.046111 0.036426 0.0 0.0 0.0