Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi11g00378 | ATGCAATTTATAGAAACAAGAACTTGTTTCTTTTCTGGGTTTCTCTTTTCCCCAGTTCAAATGGGGGTTTTAAGATGCTTGTGCTTCAATCTTCTTGTGTTTTTGTTGCTTTGTGTAGCGGCTTCTTCTACTGATCGTTACTCCGAAGCACTTTTAAGCTTGAAATCTGAATTTGTTGATGATTTTGGGAGTTTGAGTGATTGGATTGTGGGTTCTGGAGAAAACCCATTTGGGAAAATCCATGGATGTTCTTGGTCAGGGATCAAATGCGACAAGAATTCCACCATTGTTATTGGAATTGACCTGTCGATGAAGAAGCTTGATGGGGCGATTTCTGGTGAGCAGTTTCATGTTTTTAAAGAACTTGTTGATCTTAACTTGAGTCACAATTATTTGTCTGGGAAGCTTCCTGTTGGAATCTTCAATCTCAGTAATCTAAGAAGTTTGGATATCAGTAGGAATAATTTTTCTGGTCATTTTCCTCTTGGGATTTCTGGTCTTCAAAACTTGGTTATTCTTGATGCTTTTAGCAATAGTTTTTCTGGGTCATTGCCTGTTGATCTTCCCGAGCTTGAAAATCTGAAGTTTCTCAACTTTGCTGGGAGCTACTTCAAAGGGCCAATCCCTTCAGAATATGGTTCTTTCAAAAAACTTGAGTTCATTCATCTTGCAGGAAATTTTCTTAGTGGAAACTTACCTCCTGAATTGGGCAAACTCAAAACTGTGACTCATATGGAGATTGGCTACAATAGTTTCCAGGGAAATCTCCCATGGGAATTAGGCAATATGAGTAACCTTCAATATCTTGATATTGCAAGTGGAAATCTCTCTGGTTCAATTCCTAAAGAACTTGGTAATCTCACAAAGCTTGAGTCTCTTTTCCTTTTCAGAAACCAGCTATCTGGGTTCTTGCCCAAGGAACTAAGCAAAATCACTTCTCTTGTTAATTTAGATCTCTCTGATAATCATATTTCTGGTCCTATTCCAGAAAGCTTTTCAGAGTTGAAAAATCTTAGATTGCTCAGTGTTATGTACAATGAAATGACTGGTTCTGTTCCAAAAGGCATTGGAGAGCTTCCTTCATTGGAGACTCTTCTTATATGGAGCAATCAGTTCTCTGGATCACTCCCAAACAACTTGGGCAGCAACAAAAAACTTAAATGGGTTGATGTTTCCACAAACAATTTTGTTGGTGTCATCCCACCAAATATCTGCCAAGGAGATTTACTTTTTAAGTTGATCCTGTTTTCAAATCAGTTTAGTGGTGGACTTTCCCCATCCCTCTCTAATTGTTCTTCCCTTGTTCGATTGCGGCTAGAGGATAATATGTTTTCAGGTGATATTGCTCTGAAATTTAGTGATCTTCCTGATATCTCATACATAGATCTCTCTAGAAACAATTTTAGTGGAGGATTTCCTTTGGATATAAGTAAAGCTTCCAACCTTCAATACTTGAATATCTCTCATAACCCACAACTAGGAGGTGTTTTTCCTGCAGAAACATGGACTTTACCCTTTCTTCAAAACTTTTCAGCTTCTGATTGTGGTATAAGAGGAAACCTTCCCAAGTTTCAGCTCTGCAAATCCATTTCTACTATTGAATTGAATAATAACAAACTATCAGGAAAAGTCCCAGAAAGCATTGCAAGTTGCCAGGCTCTTGTAAGGATGGATTTGTCTTACAACAATCTCTCTGGTCATATACCTGAAGAACTTGCACATCTTCCTTCTATTAGCATCCTTGATCTATCTCACAACGGTTTCAATGGGTCGATACCTGATAAGTTCAGGGATTCGTCGAGCTTGCTTCTACTAAATGTGTCTTCCAATGATATCTCTGGTTCCATCCCAGAAAAAGAAGCGTTTCGATCAATGGGCAGCAGTGCATTTGCTGGAAATCCAAAGCTATGTGGAGCACCTCTGAGGTCATGTTCAGGTTCATTGGCAATGCTTGGAGGCAAAGGGATGGGGAAGCTTATACTCATCCTGATACTGTGTGCAGGTCTTGCTATAATCACGACGATATCAATTGTGTGGATTTTCTTCGTCCGAAGAGGTAGCAAAGGTAAATGGAAGATGGTGTCATTCACTGGACTTCCTCCATTCACAGCTAATGATATTCTCAGGAGTTTCGACTCTACGGAATCTAAGGAAGCGATATTGCCATTGTCTGCTTCGATTTTCAAAGCAGTTCTGCCGACTGGAATCACGGTGTCAATAAAGAAGATAGATTGGGAAGCAAAAAGAATGAAGACGATATCGGAGTTTATAACTCAATTAGGTGGTTTGAGGCACAAGAATTTGGTCAGATTGCTGGGATTCTGCCACAACAAACAGATGGTTTATCTTCTTTATGATTACTTGCCCAATGGAAATCTAGCAGAGAAAATTTCAATGAAAAGGGAATGGCCAATTAAACTCAAACTCATTATAGGTATAGCAAGGGGAATACACTTTCTTCACCATGACTGTTATCCTGCAATTCCCCATGGAGACTTGAAGCCAAGTAACATCATTTTCGACGAAAATATGGAACCCCATCTGGCTGAATTCGGACTCCGATTTCTACAACAACTAAATGAAGATCCGCTTCAATTACCGTCTACAACGAACGGAGAAGATAAATTCAATAATGCAACAGAGGAGGAGCTGTGGATGGATGTTCATAGTTTTGGGGAGATCATCCTTGAAATTATAAGCAATGGACGGTTGACGACTGCTGGATCGAGCACACAGAACAAGGCAAGAGATCTTCTGTTAAGAGAAATATACAAAGAAAATGGGATTACCTCTCCCAATTCATCACAAGAGGAAATAAAACAGGTTCTTGATCTAGCTTTGCTATGCACAAGGAGCAGGCCATCCAACAGACCATCCATGGATGATATCTTAAAGCTGTTATCAGAAATGAAACCAGAGACTTTGAAGGAGGAAGCTGTTTGTACTTTTGGTTTCAATATCATTTTTACCCCAAAAGAAGAAAGAAAAAGTATAGATTGTAAGATTGTAAAAGAAATATCAAAAGGGGAGAACGATCAAAACCACGCGCGTCGATACGCGCGTGCTCTACAAGCTCAGATAACCCATTTTCCCGCCAAGTACTTGCTTCCCGCCAAAAATACGTTCAGTCATAAGCCTTCGCCTCCATCGCTAAGCACAGAACAAAAAACCTCAAAGCTCCGAGAGAGAGAGAGAGAGAAAGAGAGAACGAAGGGTTTCAAGTGTTTCTTGAGGAAGAACCCTAATCTGCACGCAGAAATGTCGGGCTGGGATGAAGGAGGAATCTACTACAGCGACCAAGCGCAGTCCCTTGGTGACGGAACCGGCATCGGACGAAGCGGAGATGCCGACGACAAGGCCACTCATCACTCGGTTCTTCGCAAATTCAAGGAGTTCATTCGTGGATTTGAAGCCGACAAGAATGTTTTCCCTTACAGAGAGAGCCTTCTCCACAATCCCAAGTATCTTCGCGTTGATATGGAAGACGTTAACGCTTTTGATTCCGATCTTCCGGCGAAGCTTCGATCTTCTCCTGCCGATTTCTTGCCCTTGTTTGAGACTGCTGCAGGGGAGGTTTTAATGAATCTAAAGACGAAGGTGGCTGGTGAGACTGGAGAAATGGTGGAGCCCGTGCCTGGGGATGTTCAAATTCTGCTTACGTCGAAGGAGGATCCGGTCTCGATGCGGTCCCTTGGGGCACAGTACATTTCAAAACTTGTTAAAATATCTGGAATCACAATAGCTGCGTCAAGGACCAAGGCAAAGGCAACATATGTGACCTTAATTTGTAAAAACTGTAGAAGTACAACACGAGTTCCTTGTCGGCCAGGACTTGGAGGGGCAATTGTACCTCGATCATGTAATCATATTCCTCAGGCGGGAGAAGAACCATGCCCACTGGATCCCTGGATCGTGGTTCCTGACAAAAGTATGTATGTTGATCAACAGACTCTAAAACTGCAGGAAAACCCAGAGGATGTCCCAACTGGGGAACTTCCTAGGAACATGCTTCTATCAGTAGATCGCCATCTTGTTCAAACAATTGTCCCAGGCACTAGATTGACCATCATGGGGATATACAGTATCTACCAAGCTGCCAATTCTTCTGCATCACACAAAGGAGCAGTTGCAATCAGACAGCCTTATATCAGGGTTGTAGGCATTGAAGAATGTAATGAAACTAATTCTCGGGGCCCTGCATCCTTCACAACAGAAGATATAGAAGAGTTCAAAAAATTTGCAGCAGAGCCTGATGTCTATAAAAGCATATGTTCAAAGATTGCCCCCTCTATATTTGGTCACGATGATGTGAAAAAGGCCGTGGCTTGTCTTCTTTTTGGAGGATCCAGGAAGAATTTGCCAGATGGGGTTAAGTTAAGAGGTGACATTAATGTATTACTCTTGGGGGACCCCTCTACAGCTAAATCCCAGTTTCTCAAGTTTGTTGAGAAGACAGCTCCGGTTGCTGTTTATACTTCTGGAAAAGGTTCATCAGCTGCTGGTCTTACAGCTTCAGTGATTCGAGATAGTAGCTCTCGAGAGTTTTATCTTGAAGGAGGTGCAATGGTTTTGGCTGATGGAGGTGTTGTCTGCATTGATGAGTTTGACAAAATGAGATCAGAGGATAGAGTTGCTATTCATGAAGCCATGGAACAACAGACAATATCAATTGCCAAAGCAGGAATAACAACGGTTCTTAATTCCAGAACCTCAGTGCTTGCCGCTGCTAATCCTCCATCAGGACGTTATGATGATCTTAAGACAGCACAGGATAACATTGATTTGCAGACAACAATTCTCTCTAGATTTGATTTAATTTTCATCGTTAAAGATATAAGGATGTACAGTCAAGATAAGGTAACTATAAAGCATGCTCTTCTATTTCAACTCAAAATGCCCTTTTCCACTTTCGTGCATGGACTTGGGCTTGCCTCTTTTTGCTTGAGTTTTATTATTATAGCAAGCCACATAATAAAAGTTCACGCATCTGCTGATGCAACCTTGGGTGAAAATAGAGCTTCTAAAGAAGAGAATTGGCTAAAGAGGTATATTCAATATTGTCGAACTCAATGTTATCCCCGTTTGTCAGAATCGGCATCTATAATGCTGCAGAATAACTATGTTAAAATCAGACAGGACATGAGACAACAAGCAAACGAAACAGGGGAGGCTGCTGCAATTCCGATTACAGTAAGGCAGCTGGAAGCTATTGTAAGATTAAGCGAGGCACTTGCAAAAATGAAGTTGTCCCATGTTGCCACTGAGGAAAATGTGCAGGAAGCTATTAGACTTTTTACTGTAGCCACGATGGACGCAGCACGCTCTGGGATTCATCAGCAAGTAAATCTGACTCCTGAAATTGCTAATGAAATAAAGGTTGGTCTAATACACAACCACAACACTGGTTTTCATTTCCTCCAAGCAGAAACACAGATAAAGAGAAGAATAGGAATTGGCAACCACATTTCTGAGAGAAGGCTGATTGACGAGCTCACCAAAATGGGGATGAACGAGTCAATTGTGAGAAGAGCTCTGATTATTATGCACCAGAGAGATGAAGTTGAATATAAAAGAGAAAGGCGTAGTTCAAACATACGGGGTGATGAGATATTATTAAACCAGAAGAAGACCACAGTCATGATAGCCATGTACGTTCCGAGAACAACACCGGTGGCGAAAATTTCGTTTAGCTTCCATGAATCAGGCATAGGAGATGGCTTCACTCTATCCTTGGAGATGGTCATGATGGTTCCATCATTCAAGATGGCAATGATCAAGACCATGAAAGGTGAGAAGTCAAACTTCCAGATTAGAGCTACAAGCAAGAAACCCAACACGATTCGAATTATGGCTCTACTTGTTAGAACTGCACTCACGATTACACTGAGACCTGGTTCCGTTAAAACAATGTCTGATGCACTCCTTGCTGCATCTGTTGCATCAGCTACAGCAATTCCGATATCGGCCTTCTTGAGTGCAGGGGCATCGTTGACACCGTCACCAAAAGTTATTACCAGGGAATACACCAGCAAATCCATCTGCCTTCTCAATAAGTTCATCTACAGGAATGCTAGCAATGGATTCATCCTTGCTTTGACCAAGAGCACCCTTGCTACTTCTATGCCAGTTTCCATTACTATCAATGTAAGTGATAGCAGTGCGCTTCTCAACAGGATTGAA | 6180 | 41.55 | MQFIETRTCFFSGFLFSPVQMGVLRCLCFNLLVFLLLCVAASSTDRYSEALLSLKSEFVDDFGSLSDWIVGSGENPFGKIHGCSWSGIKCDKNSTIVIGIDLSMKKLDGAISGEQFHVFKELVDLNLSHNYLSGKLPVGIFNLSNLRSLDISRNNFSGHFPLGISGLQNLVILDAFSNSFSGSLPVDLPELENLKFLNFAGSYFKGPIPSEYGSFKKLEFIHLAGNFLSGNLPPELGKLKTVTHMEIGYNSFQGNLPWELGNMSNLQYLDIASGNLSGSIPKELGNLTKLESLFLFRNQLSGFLPKELSKITSLVNLDLSDNHISGPIPESFSELKNLRLLSVMYNEMTGSVPKGIGELPSLETLLIWSNQFSGSLPNNLGSNKKLKWVDVSTNNFVGVIPPNICQGDLLFKLILFSNQFSGGLSPSLSNCSSLVRLRLEDNMFSGDIALKFSDLPDISYIDLSRNNFSGGFPLDISKASNLQYLNISHNPQLGGVFPAETWTLPFLQNFSASDCGIRGNLPKFQLCKSISTIELNNNKLSGKVPESIASCQALVRMDLSYNNLSGHIPEELAHLPSISILDLSHNGFNGSIPDKFRDSSSLLLLNVSSNDISGSIPEKEAFRSMGSSAFAGNPKLCGAPLRSCSGSLAMLGGKGMGKLILILILCAGLAIITTISIVWIFFVRRGSKGKWKMVSFTGLPPFTANDILRSFDSTESKEAILPLSASIFKAVLPTGITVSIKKIDWEAKRMKTISEFITQLGGLRHKNLVRLLGFCHNKQMVYLLYDYLPNGNLAEKISMKREWPIKLKLIIGIARGIHFLHHDCYPAIPHGDLKPSNIIFDENMEPHLAEFGLRFLQQLNEDPLQLPSTTNGEDKFNNATEEELWMDVHSFGEIILEIISNGRLTTAGSSTQNKARDLLLREIYKENGITSPNSSQEEIKQVLDLALLCTRSRPSNRPSMDDILKLLSEMKPETLKEEAVCTFGFNIIFTPKEERKSIDCKIVKEISKGENDQNHARRYARALQAQITHFPAKYLLPAKNTFSHKPSPPSLSTEQKTSKLREREREKERTKGFKCFLRKNPNLHAEMSGWDEGGIYYSDQAQSLGDGTGIGRSGDADDKATHHSVLRKFKEFIRGFEADKNVFPYRESLLHNPKYLRVDMEDVNAFDSDLPAKLRSSPADFLPLFETAAGEVLMNLKTKVAGETGEMVEPVPGDVQILLTSKEDPVSMRSLGAQYISKLVKISGITIAASRTKAKATYVTLICKNCRSTTRVPCRPGLGGAIVPRSCNHIPQAGEEPCPLDPWIVVPDKSMYVDQQTLKLQENPEDVPTGELPRNMLLSVDRHLVQTIVPGTRLTIMGIYSIYQAANSSASHKGAVAIRQPYIRVVGIEECNETNSRGPASFTTEDIEEFKKFAAEPDVYKSICSKIAPSIFGHDDVKKAVACLLFGGSRKNLPDGVKLRGDINVLLLGDPSTAKSQFLKFVEKTAPVAVYTSGKGSSAAGLTASVIRDSSSREFYLEGGAMVLADGGVVCIDEFDKMRSEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRYDDLKTAQDNIDLQTTILSRFDLIFIVKDIRMYSQDKVTIKHALLFQLKMPFSTFVHGLGLASFCLSFIIIASHIIKVHASADATLGENRASKEENWLKRYIQYCRTQCYPRLSESASIMLQNNYVKIRQDMRQQANETGEAAAIPITVRQLEAIVRLSEALAKMKLSHVATEENVQEAIRLFTVATMDAARSGIHQQVNLTPEIANEIKVGLIHNHNTGFHFLQAETQIKRRIGIGNHISERRLIDELTKMGMNESIVRRALIIMHQRDEVEYKRERRSSNIRGDEILLNQKKTTVMIAMYVPRTTPVAKISFSFHESGIGDGFTLSLEMVMMVPSFKMAMIKTMKGEKSNFQIRATSKKPNTIRIMALLVRTALTITLRPGSVKTMSDALLAASVASATAIPISAFLSAGASLTPSPKVITREYTSKSICLLNKFIYRNASNGFILALTKSTLATSMPVSITINVSDSSALLNRIE | 2060 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3882467 | 3897146 | - | Lsi11G003780.1 | Lsi11g00378 | 673545 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi11g00378 | 2060 | Gene3D | Transferase(Phosphotransferase) domain 1 | 788 | 983 | - | - | |
Lsi11g00378 | 2060 | Gene3D | Ribonuclease Inhibitor | 44 | 331 | IPR032675 | - | |
Lsi11g00378 | 2060 | PRINTS | Mini-chromosome maintenance (MCM) protein 5 signature | 1763 | 1780 | IPR008048 | GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555 | |
Lsi11g00378 | 2060 | PRINTS | Mini-chromosome maintenance (MCM) protein 5 signature | 1379 | 1391 | IPR008048 | GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555 | |
Lsi11g00378 | 2060 | PRINTS | Mini-chromosome maintenance (MCM) protein 5 signature | 1687 | 1702 | IPR008048 | GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555 | |
Lsi11g00378 | 2060 | PRINTS | Mini-chromosome maintenance (MCM) protein 5 signature | 1229 | 1244 | IPR008048 | GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555 | |
Lsi11g00378 | 2060 | PRINTS | Mini-chromosome maintenance (MCM) protein 5 signature | 1255 | 1267 | IPR008048 | GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555 | |
Lsi11g00378 | 2060 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 1520 | 1534 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Lsi11g00378 | 2060 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 1572 | 1584 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Lsi11g00378 | 2060 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 1599 | 1607 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Lsi11g00378 | 2060 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 1548 | 1561 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Lsi11g00378 | 2060 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 1460 | 1475 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Lsi11g00378 | 2060 | Gene3D | - | 1400 | 1786 | IPR027417 | - | |
Lsi11g00378 | 2060 | Pfam | Leucine rich repeat | 530 | 587 | IPR001611 | GO:0005515 | |
Lsi11g00378 | 2060 | Pfam | Leucine rich repeat | 313 | 371 | IPR001611 | GO:0005515 | |
Lsi11g00378 | 2060 | CDD | MCM5 | 1423 | 1767 | - | - | |
Lsi11g00378 | 2060 | Gene3D | - | 1117 | 1208 | - | - | |
Lsi11g00378 | 2060 | ProSiteProfiles | MCM family domain profile. | 1419 | 1625 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Lsi11g00378 | 2060 | Pfam | MCM N-terminal domain | 1127 | 1198 | IPR027925 | - | |
Lsi11g00378 | 2060 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1429 | 1766 | IPR027417 | - | |
Lsi11g00378 | 2060 | PANTHER | UNNAMED PRODUCT | 22 | 973 | - | - | |
Lsi11g00378 | 2060 | Gene3D | - | 1255 | 1313 | - | - | |
Lsi11g00378 | 2060 | Pfam | Protein kinase domain | 725 | 965 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lsi11g00378 | 2060 | Pfam | MCM AAA-lid domain | 1679 | 1767 | IPR041562 | - | |
Lsi11g00378 | 2060 | ProSitePatterns | MCM family signature. | 1528 | 1536 | IPR018525 | GO:0003677|GO:0005524|GO:0006260 | |
Lsi11g00378 | 2060 | SUPERFAMILY | Protein kinase-like (PK-like) | 725 | 967 | IPR011009 | - | |
Lsi11g00378 | 2060 | SMART | mcm | 1224 | 1770 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Lsi11g00378 | 2060 | SMART | LRR_typ_2 | 311 | 334 | IPR003591 | - | |
Lsi11g00378 | 2060 | SMART | LRR_typ_2 | 143 | 167 | IPR003591 | - | |
Lsi11g00378 | 2060 | SMART | LRR_typ_2 | 359 | 383 | IPR003591 | - | |
Lsi11g00378 | 2060 | SMART | LRR_typ_2 | 575 | 598 | IPR003591 | - | |
Lsi11g00378 | 2060 | SMART | LRR_typ_2 | 287 | 310 | IPR003591 | - | |
Lsi11g00378 | 2060 | ProSiteProfiles | Protein kinase domain profile. | 691 | 975 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lsi11g00378 | 2060 | SUPERFAMILY | L domain-like | 330 | 644 | - | - | |
Lsi11g00378 | 2060 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 828 | 840 | IPR008271 | GO:0004672|GO:0006468 | |
Lsi11g00378 | 2060 | SUPERFAMILY | Nucleic acid-binding proteins | 1128 | 1385 | IPR012340 | - | |
Lsi11g00378 | 2060 | SUPERFAMILY | L domain-like | 79 | 401 | - | - | |
Lsi11g00378 | 2060 | Gene3D | Ribonuclease Inhibitor | 332 | 649 | IPR032675 | - | |
Lsi11g00378 | 2060 | Gene3D | Phosphorylase Kinase; domain 1 | 711 | 787 | - | - | |
Lsi11g00378 | 2060 | Pfam | MCM OB domain | 1228 | 1363 | IPR033762 | - | |
Lsi11g00378 | 2060 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE | 22 | 973 | - | - | |
Lsi11g00378 | 2060 | MobiDBLite | consensus disorder prediction | 1039 | 1068 | - | - | |
Lsi11g00378 | 2060 | Pfam | Leucine rich repeat N-terminal domain | 49 | 91 | IPR013210 | - | |
Lsi11g00378 | 2060 | Pfam | MCM P-loop domain | 1406 | 1625 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Lsi11g00378 | 2060 | Gene3D | - | 1228 | 1363 | IPR012340 | - | |
Lsi11g00378 | 2060 | SMART | serkin_6 | 717 | 971 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi03g01268 | Lsi-Chr3:23425369 | Lsi11g00378 | Lsi-Chr11:3882467 | 2.00E-97 | dispersed | |
Lsi03g02054 | Lsi-Chr3:31863226 | Lsi11g00378 | Lsi-Chr11:3882467 | 1.35E-06 | dispersed | |
Lsi07g00100 | Lsi-Chr7:1134112 | Lsi11g00378 | Lsi-Chr11:3882467 | 0 | dispersed | |
Lsi11g00378 | Lsi-Chr11:3882467 | Lsi01g00847 | Lsi-Chr1:6791970 | 4.25E-156 | dispersed | |
Lsi11g01129 | Lsi-Chr11:19722511 | Lsi11g00378 | Lsi-Chr11:3882467 | 4.18E-86 | dispersed | |
Lsi11g00378 | Lsi-Chr11:3882467 | Lsi05g00800 | Lsi-Chr5:11817984 | 1.05E-159 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
84021 | PF07714 | PK_Tyr_Ser-Thr | 4.00E-20 | CL0016 | Lsi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi11g00378 | - | K02209 | csv:101212061 | 1694.48 |