Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi11g00624 ATGGGAGGTTTGAGTGAGGGTCTAACACAGTTGCTGATACCTGCAGCTGCTCTGCTTGGTATTGGTTTTGCCCTTCTTCAATGGCTTTTGGTTTCGAGAGTTAAGGTTTCTAGCTACCCTGATGATGAAAGCCAAGAAAACAACTTGATTGAAGGAGGAGAAGAGGAAGGTATTGATGATATCGAGGTTGTCGCAAAGTGTGCCGAAATCCAGAAGGCAATTTCTGTTGGAGCAACCTCATTTTTATTCACACAGTATAAATACCTTGTTGTCTTCATGGGAGCATTTGGAGCCATCATTTTTCTGTTCCTTGGTTCAGTTAAGAGGTTCAGCACCAAAAGTGAACCTTGCACTTACAACAAGGGACAGATGTGTAAACCAGCTCTAGCCAATGCCATTTTTAGCACAATTGCTTTCTTGCTAGGTGCTCTGACCTCGGTTCTATCTGGTTTCCTTGGAATGAAGATTGCAACTTATGCAAATGCGCGAACGAGTCTAGAAGCACGGAAAGGCATTGGAAGAGCATTCGTTATTGCTTTTCGCTCCGGTGCTGTGATGGGATTCCTTCTAGCTGCCAATGGTCTCCTTGTATTATATGCCTCCATCAATTTGTTTAAGCTATATTATGGTGACGACTGGGAAGGACTGTACGAATCTATCACGGGTTACGGTCTTGGAGGTTCTTCAATGGCGCTGTTTGGAAGAGTTGGTGGTGGCATATACACAAAAGCAGCTGATGTTGGAGCTGATCTTGTAGGGAAAATTGAAAAGAACATTCCTGAAGACGATCCACGAAATCCTGCTGTCATAGCTGACAATGTGGGTGACAATGTAGGAGATATTGCAGGAATGGGATCTGACTTATTTGGATCTTATGCAGAATCAACCTGTGCTGCACTTTTCGTAGCATCGATATCGTCCTTTGGCTCTACACAGAACTATGCAGCCATGTCCTACCCTCTACTTGTAAGCTCAATGGGAATTGTGATTTGTTTAATAACTACACTTTTTGCAACTGACCTCATTGAGATTAAGAAAGTGAGCGAAATCGAACCGTCATTAAAGCGACAACTTCTTATCTCCACCGTGCTGATGACAGTAGGGGTAGCTTTAGTCAGCTTCGTTGCTTTGCCTTCAAAATTCACTCTTTACGATTTCGGCACCGACAAGGTCGTAAAGAACTGGTATGACTTTATTAATTACAAGAATCTCTCTTCCCCACATAAACATCAGTCTTTTATGCTGACTAAAATTACATCCAAATGCAGGCACATTTTCTTCTGTGTTGTGACAGGATTATGGGCTGGACTTGTTATTGGATATACAACTGAGTATTACACTAGCAATGCTTACAGTCCAGTGCAGGATGTGGCTGATTCTTGCAGAACCGGTGCCGCAACGAATGTAATATTTGGATTAGCTCTCGGATACAAATCCGTCATCATTCCCATATTTTCAATCGCCTTATCCATTTATGTGAGCTTCCGCTTGGGAGCCATGTATGGTATTGCAATGGCTGCTTTGGGAATGCTTAGCACCATTGCCACTGGTCTAGCCATTGATGCTTATGGTCCAATAAGTGACAATGCAGCTGCTCTTGTTTCCCTCGCCTTGTTCGGCGCCTTTGTGAGCCGAGCAGGCATCGAAACAGTCAATGTCATGAACCCGAAAGTTTTCATCGGATTGATAGTAGGTGCAATGCTTCCATACTGGTTTTCAGCCATGACAATGAAGAGCGTCGGCAGCGCAGCGCTGAAGATGGTCGAGGAAGTTCGACGACAATTCAACTCTATCCCAGGGCTGATGGAAGGCAGGACGAAACCGGACTATGCAAATTGTGTGAAGATATCGACGGATGCTTCGCTTAAGGAGATGATCCCACCTGGTGCTCTTGTTTTGGTAACACCACTCATTGCTGGAACATTCTTTGGAGTTGAAACTCTTGCTGGACTTCTGGCTGGTTCCCTTGTTTCTGGAGTGCAGGCAGGAAGAAGTGAACATGCTAAAGCACTTGGTCCTAAAGGGTCAGATGCACACAAGGCAGCAGTGATAGGTGACACAGTTGGGGATCCTCTCAAAGACACTTCTGGTCCATCACTTAATATTCTCATCAAGCTTATGGCTGTTGAGTCTTTGGTTTTTGCTCCTTTTTTTGCTGCTCATGGTGGCCTCATCTTCAATCGTATATAA 2190 44.29 MGGLSEGLTQLLIPAAALLGIGFALLQWLLVSRVKVSSYPDDESQENNLIEGGEEEGIDDIEVVAKCAEIQKAISVGATSFLFTQYKYLVVFMGAFGAIIFLFLGSVKRFSTKSEPCTYNKGQMCKPALANAIFSTIAFLLGALTSVLSGFLGMKIATYANARTSLEARKGIGRAFVIAFRSGAVMGFLLAANGLLVLYASINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKIEKNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESTCAALFVASISSFGSTQNYAAMSYPLLVSSMGIVICLITTLFATDLIEIKKVSEIEPSLKRQLLISTVLMTVGVALVSFVALPSKFTLYDFGTDKVVKNWYDFINYKNLSSPHKHQSFMLTKITSKCRHIFFCVVTGLWAGLVIGYTTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFSIALSIYVSFRLGAMYGIAMAALGMLSTIATGLAIDAYGPISDNAAALVSLALFGAFVSRAGIETVNVMNPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNSIPGLMEGRTKPDYANCVKISTDASLKEMIPPGALVLVTPLIAGTFFGVETLAGLLAGSLVSGVQAGRSEHAKALGPKGSDAHKAAVIGDTVGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGLIFNRI 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6632115 6639612 - Lsi11G006240.1 Lsi11g00624 673791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi11g00624 729 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 411 531 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lsi11g00624 729 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 531 727 - -
Lsi11g00624 729 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 411 531 - -
Lsi11g00624 729 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 5 399 - -
Lsi11g00624 729 Pfam Inorganic H+ pyrophosphatase 43 531 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lsi11g00624 729 Pfam Inorganic H+ pyrophosphatase 530 714 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lsi11g00624 729 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 531 727 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lsi11g00624 729 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 5 399 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lsi11g00624 729 PIRSF H+-PPtase 530 727 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lsi11g00624 729 PIRSF H+-PPtase 42 532 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi06g01021 Lsi-Chr6:20386431 Lsi11g00624 Lsi-Chr11:6632115 1.36E-105 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi11g00624 K23025 - csv:101205277 1261.13