Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi11g00634 | ATGGAATTTGAAGAAGCCCCTCTCTTGCAAAAAGTTTGTGCTCTTTACCATGAAATCTCAAGCCTCACTAGCCTTAAGCCTTCAAAAAATGTCGACACTCTTTTCACTCAACTCGTCCTCACGTGCTCTCCGCCTGCCCCTGGCCTTGATATTGCTTCTTTGTCTCAGCCACTTCAAGCCATGAGGACTCATCTCATTCGTCTTTGTGCTAAAGCTGAGGCTCTTCTTGAACTTCATTTCTCTTCCATTTTGGCTTCTTCTTTTCATAATCCTATTTCTAATTTGTCTATCTTCCCTTACTACTCTAATTACTTGAAGCTTTCCCTTCTTGAGTTTGATATTCTTCGATCTCATTGTCGTCGTATTCCTGCTACCGTCGCGTTCGTTGGCTCCGGTCCCCTCCCGCTCTCCTCCATTGTCATGGCGTCCATTCATCTTAAGGGTAACCGTTGTTGA | 456 | 44.52 | MEFEEAPLLQKVCALYHEISSLTSLKPSKNVDTLFTQLVLTCSPPAPGLDIASLSQPLQAMRTHLIRLCAKAEALLELHFSSILASSFHNPISNLSIFPYYSNYLKLSLLEFDILRSHCRRIPATVAFVGSGPLPLSSIVMASIHLKGNRC | 151 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6700569 | 6701024 | + | Lsi11G006340.1 | Lsi11g00634 | 673801 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi11g00634 | 151 | Gene3D | Vaccinia Virus protein VP39 | 9 | 151 | IPR029063 | - | |
Lsi11g00634 | 151 | Pfam | Nicotianamine synthase protein | 5 | 147 | IPR004298 | GO:0030410|GO:0030418 | |
Lsi11g00634 | 151 | ProSiteProfiles | Nicotianamine synthase (NAS)-like family profile. | 1 | 151 | IPR004298 | GO:0030410|GO:0030418 | |
Lsi11g00634 | 151 | PANTHER | NICOTIANAMINE SYNTHASE 3 | 4 | 148 | IPR004298 | GO:0030410|GO:0030418 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi06g00055 | Lsi-Chr6:447411 | Lsi11g00634 | Lsi-Chr11:6700569 | 4.89E-56 | dispersed | |
Lsi11g00633 | Lsi-Chr11:6689014 | Lsi11g00634 | Lsi-Chr11:6700569 | 6.23E-49 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi11g00634 | K05953 | - | csv:101203651 | 243.432 |