Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lsi11g00812	ATGAAGACGCCGGCGAACGGTGCCGCCGGTGCCGCCGCCGCGCCTAATTCCAACGAAGGTGGATTGGAGAAGAAGATCATAAATCCGGAGTTATGGCAAGCGTGCGCCGGTCCACTGGTGAACCTGCCGCCGGCCGGTTACCACGTGGTGTATTTTCCACAAGGCCACAGCGAACAGGTTGCAGCATCTTTGAGGAAAGATGTGGATGGCCAAGTCCCAAACTACCCAAATCTTCCTTCCAAGTTACTATGTTTGCTTCATAATGTAACATTACATGCTGACCCAGAAACAGATGAAGTATATGCTCAAATGACCCTACTGCCAGTTCCTTCTTTTGACAAGGATGCATTGTTGAGATCAGATCTAGCTCTCAAGTCTAATAAGCCTCAACCAGAATTCTTCTGTAAAACATTGACTGCAAGTGACACGAGCACTCATGGTGGGTTCTCCGTGCCGCGCCGTGCTGCAGAGAAGATCTTCCCCCCTCTTGATTTCTCAATGCAACCCCCTGCACAAGAGCTTGTTGCTAAGGATTTGCATGATAATGTATGGACTTTCCGTCACATATATCGAGGCATAGATGAAAAACAACAGCTTCTTTTGGGCATTAGGCGAGCGAACAGGCAACCGACAAACTTATCATCATCAGTGTTGTCAAGTGATAGTATGCATATTGGTATTCTTGCAGCTGCTGCCCATGCTGCTGCAAACAATAGCCCTTTCACCGTCTTCTACAACCCGAGGGCAAGTCCTTCAGAATTTGTCATTCCTCTTGCCAAATATTATAAGGCAGTGTCTGCAAACCAAATATCACTCGGAATGCGCTTCAGAATGATGTTCGAAACTGAAGAGTCTGGAACTAGAAGGTATATGGGCACTATTACTGGTATAAGTGATCTTGATCCTGTCCGATGGAAGGGCTCACAATGGCGTAATCTACAGGTTGGGTGGGATGAGTCGACTGGAGGAGAAAGACGAAATCGAGTCTCCATATGGGAGATCGAGCCTGTTATTGCTCCATTTTTCATTTGCCCCCCTCCTTTTTTGAGATCGAAACGTCCGAGGCAACCAGGAATGCCAGATGACGACTCTTCTGATTTGGATGGTATATTTAAAAGAACAATGTTTGGTGACGATTTTTGCATGAAAGATCCACAAGGATATCCTGGCCTAAACTTAGTTCAATGGATGAATATGCAAAACCCTTCACTTTCTAATTCAATGCAGCCAAATTATATGCATTCGTTTTCTGGGTCTATGCTTCCAAACCTTGGTGGAGTCGATATTTCTCGGCAACTTGGTTTGTCAAATGCACAAATTCCTCAATCAAACAACATACAGTTCAATGCACAAAGGCTACTTTCTCAGGCTCAACAGTTAGATCAGCTACCTAAGCTACCGTCAAGTATGAACTCGTTGGGGTCCGTGGTGCAGGCACCGCAGCAGTTGGATGATATGTCTCAGCAGACCCGACAGAATTTGATTAACCAAAACGCAGTCTCGAGTCAGATTCAGGCTCAAATAATGCAGCAGCCTCACACTAATGGGATCCTACAGCAGCAAACTGCTTTGCAAAACCAGCAGCTTCAGAGAAGTGTCCCTCAGAATCTGCAAATGCAGCAGCATCAGCAAATTTTAGGTCAAAATCAACAACAGAATATGAATCAGTCACCGCTTCCGGAGCAGTTAAATCATCAGTTACAAATGTCGGATAATCAGGTTCAAATGCAGATGTTGCAGAAGTTTCAGCAGCAGCAGCAATCAATTTTGGCTCAGCAGTCTTCTCTTCAGCCTGCTCAACTCACCCAACTACCGGAGCAGCAGAGACAGTCAGTAGATGCGTCCCAAAGCTTTTCTAGGTCCATGTCATCTAACCAAATGCTCGACATTCCTCAATCCACCCCAACTGCAGGCCCTCCATCAAATGCATTACCGCAGCAGGCAGTGAATTGCAATAGCCAGACGAATAATCGATTCTCAAATCAGCATTTGCAACCAAAACTTCCACAACTACAGCAACCACCTCCATCTACTGTGCTTTCTGATATGTCTAGGCCAGTGGGACTTCCTCCTACCCAAACAAACAATCAGCTCTCTGCAGCTACTAGTAGTTTAATAACAGGAGCAGCAGGGGCTGGCCAATCTGGTATCACTGACGACATACCATCTTGCTCCACGTCACCTTCCACGAATAATTGTCCAAGTTTGGTTCAACCGGTAGCCAATGGAAGGGTTCATCGAACCACGGGATTGGTCGAGGATGTTGCTCAATCAGCTGCAACAATATTCAGTTCAAATACGTTGGATACCATGTCACCAAATGCCAACTTAGTTCATAAAGATTTGCCACAGAAGACTGCTGTTAAACCTTCACTGAATATGTCCAAGAATCAAAGCCATGGAATTTTTGCACAACAAACTTTCTTGAGTGGTGTCGTTGCTCAGACGGATTTCTTGGACACGTCATCCTCCACAACCTCGGCTTGCCTTTCTCAGAATGATGCTCAGTTGCAGCAGAATAACATGATGTCTTTCAACTCACAGCCAATGTTATTTAAAGATAGTACTCAGGATTTGGAAGTGCCAACAGATCTCCATAACATTCCGTACGGGGCTCATGTCGATGGACAAATGGTAGCGCAGTTAAATTCCGATCCTTTATTAGACAAAGGCATTGGAGGTTTGGGGAAAGATTTCTCCAATAATTTTTCTTCTGGGGCCATGCTCACCACCTACGATGTACAGAAAGATCCTCAACAGGAAATTTCTTCCTCTATAGTTTCCCAATCATTTGGTATTCCAGACATGACATTTAATTCCATGGATTCAACGATAAACGATAACGCCTTCTTGAATAGAAACCAATGGGCCCCTCCGCCTCCGTTCCAACGTATGCGAACCTACACCAAGGTTTACAAACGTGGAGCTGTTGGGAGATCTATTGATATCACCCGTTACTCGGGTTATGATGAGCTTAAACAAGACCTTGCCCGTAGGTTTGGTATCGAGGGACAATTGGAGGACAGGCAAAAGATAGGCTGGAAACTTGTTTATGTGGATCATGAAAATGACGTTTTGCTTGTAGGCGACGACCCTTGGGAGGACTTTGTGAACTGTGTACGAAGCATCAAGATACTTTCCCCACAGGAAGTTCAACAAATGAGCTTGGATGGAGATTTCGGGAACGGGCTCAAAGTTCATAGTGTCGAATATTTGTACGGCTACGATGTCCCGTTGCGAGAATCTTGCAGCAATGGAGGAGATATAGCCAACCAACACTCAGCAATGGCTTTAGCCATTGTCTGGTTAAATTTTCTGGACCTCTTAGCCTAG	3333	45.33	MKTPANGAAGAAAAPNSNEGGLEKKIINPELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVPNYPNLPSKLLCLLHNVTLHADPETDEVYAQMTLLPVPSFDKDALLRSDLALKSNKPQPEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGIDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKGSQWRNLQVGWDESTGGERRNRVSIWEIEPVIAPFFICPPPFLRSKRPRQPGMPDDDSSDLDGIFKRTMFGDDFCMKDPQGYPGLNLVQWMNMQNPSLSNSMQPNYMHSFSGSMLPNLGGVDISRQLGLSNAQIPQSNNIQFNAQRLLSQAQQLDQLPKLPSSMNSLGSVVQAPQQLDDMSQQTRQNLINQNAVSSQIQAQIMQQPHTNGILQQQTALQNQQLQRSVPQNLQMQQHQQILGQNQQQNMNQSPLPEQLNHQLQMSDNQVQMQMLQKFQQQQQSILAQQSSLQPAQLTQLPEQQRQSVDASQSFSRSMSSNQMLDIPQSTPTAGPPSNALPQQAVNCNSQTNNRFSNQHLQPKLPQLQQPPPSTVLSDMSRPVGLPPTQTNNQLSAATSSLITGAAGAGQSGITDDIPSCSTSPSTNNCPSLVQPVANGRVHRTTGLVEDVAQSAATIFSSNTLDTMSPNANLVHKDLPQKTAVKPSLNMSKNQSHGIFAQQTFLSGVVAQTDFLDTSSSTTSACLSQNDAQLQQNNMMSFNSQPMLFKDSTQDLEVPTDLHNIPYGAHVDGQMVAQLNSDPLLDKGIGGLGKDFSNNFSSGAMLTTYDVQKDPQQEISSSIVSQSFGIPDMTFNSMDSTINDNAFLNRNQWAPPPPFQRMRTYTKVYKRGAVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHENDVLLVGDDPWEDFVNCVRSIKILSPQEVQQMSLDGDFGNGLKVHSVEYLYGYDVPLRESCSNGGDIANQHSAMALAIVWLNFLDLLA	1110

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
11	9994471	10001646	+	Lsi11G008120.1	Lsi11g00812	673979

Annotation

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lsi11g00812	1110	CDD	B3_DNA	133	202	IPR003340	GO:0003677
Lsi11g00812	1110	MobiDBLite	consensus disorder prediction	1	20	-	-
Lsi11g00812	1110	ProSiteProfiles	PB1 domain profile.	966	1051	IPR000270	GO:0005515
Lsi11g00812	1110	MobiDBLite	consensus disorder prediction	600	648	-	-
Lsi11g00812	1110	Gene3D	-	962	1055	-	-
Lsi11g00812	1110	SMART	B3_2	134	231	IPR003340	GO:0003677
Lsi11g00812	1110	Pfam	AUX/IAA family	964	1051	IPR033389	-
Lsi11g00812	1110	SUPERFAMILY	CAD & PB1 domains	979	1045	-	-
Lsi11g00812	1110	PANTHER	AUXIN RESPONSE FACTOR	194	1063	-	-
Lsi11g00812	1110	PANTHER	AUXIN RESPONSE FACTOR	1	192	-	-
Lsi11g00812	1110	MobiDBLite	consensus disorder prediction	533	557	-	-
Lsi11g00812	1110	Gene3D	-	132	211	IPR015300	-
Lsi11g00812	1110	PANTHER	AUXIN RESPONSE FACTOR 4-RELATED	194	1063	IPR044835	GO:0003677\|GO:0006355\|GO:0009725
Lsi11g00812	1110	PANTHER	AUXIN RESPONSE FACTOR 4-RELATED	1	192	IPR044835	GO:0003677\|GO:0006355\|GO:0009725
Lsi11g00812	1110	Pfam	Auxin response factor	231	314	IPR010525	GO:0003677\|GO:0005634\|GO:0006355\|GO:0009725
Lsi11g00812	1110	SUPERFAMILY	DNA-binding pseudobarrel domain	123	234	IPR015300	-
Lsi11g00812	1110	Gene3D	-	269	339	-	-

Pathway

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lsi11g00812	-	-	-	csv:101205542	1888.23

Dupl-types

Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
Lsi01g00116	Lsi-Chr1:1225345	Lsi11g00812	Lsi-Chr11:9994471	2.31E-31	dispersed
Lsi11g00146	Lsi-Chr11:1625449	Lsi11g00812	Lsi-Chr11:9994471	0	dispersed
Lsi11g00812	Lsi-Chr11:9994471	Lsi06g01682	Lsi-Chr6:27009010	2.24E-18	dispersed
Lsi11g00812	Lsi-Chr11:9994471	Lsi02g00922	Lsi-Chr2:8889744	1.24E-28	transposed

Syn-Families

Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
Lsi01g00307	.	26	133	B3 DNA Binding Superfamily	AT1G28300	69.4	1.7e-38	157.1
Lsi04g00288	.	1	350	B3 DNA Binding Superfamily	AT1G25560	58.5	4.1e-106	381.7
Lsi09g01022	.	29	317	B3 DNA Binding Superfamily	AT1G25560	61.9	1.2e-92	337.0
Lsi03g01863	.	44	155	B3 DNA Binding Superfamily	AT1G25560	67.0	2.2e-38	156.8
Lsi09g00114	.	50	158	B3 DNA Binding Superfamily	AT1G25560	66.1	4.1e-37	152.5
Lsi09g01706	.	84	201	B3 DNA Binding Superfamily	AT1G25560	60.3	1.2e-36	151.0
Lsi09g00114	.	49	163	B3 DNA Binding Superfamily	AT1G01030	82.8	2.9e-53	206.1
Lsi04g00288	.	183	308	B3 DNA Binding Superfamily	AT1G01030	62.2	2.0e-38	156.8
Lsi10g01262	.	4	687	B3 DNA Binding Superfamily	AT4G30080	57.4	1.6e-212	736.1
Lsi01g01337	.	7	723	B3 DNA Binding Superfamily	AT4G30080	56.4	4.7e-212	734.6
Lsi08g00720	.	5	683	B3 DNA Binding Superfamily	AT4G30080	54.5	3.8e-198	688.3
Lsi02g01207	.	4	736	B3 DNA Binding Superfamily	AT2G30470	53.0	6.3e-200	694.5
Lsi03g02281	.	29	495	B3 DNA Binding Superfamily	AT2G30470	57.0	1.9e-132	470.3
Lsi03g02281	.	28	571	B3 DNA Binding Superfamily	AT4G32010	52.5	3.8e-141	499.2
Lsi10g00322	.	16	380	B3 DNA Binding Superfamily	AT3G18990	58.1	5.2e-104	374.8
Lsi11g00096	.	54	703	B3 DNA Binding Superfamily	AT1G59750	62.0	1.2e-220	763.1
Lsi02g02037	.	14	405	B3 DNA Binding Superfamily	AT1G59750	63.1	9.5e-141	497.7
Lsi01g00116	.	83	449	B3 DNA Binding Superfamily	AT1G59750	55.0	1.4e-107	387.5
Lsi11g00146	.	23	380	B3 DNA Binding Superfamily	AT1G59750	53.4	2.7e-103	373.2
Lsi02g00922	.	149	514	B3 DNA Binding Superfamily	AT1G59750	53.2	6.0e-103	372.1
Lsi09g00877	.	163	326	B3 DNA Binding Superfamily	AT1G59750	56.4	2.7e-47	187.2
Lsi10g01262	.	3	687	B3 DNA Binding Superfamily	AT2G28350	58.2	3.0e-211	731.9
Lsi01g01337	.	6	723	B3 DNA Binding Superfamily	AT2G28350	52.9	4.4e-194	674.9
Lsi08g00720	.	13	682	B3 DNA Binding Superfamily	AT2G28350	51.9	1.6e-175	613.2
Lsi09g00162	.	18	671	B3 DNA Binding Superfamily	AT2G46530	54.0	1.1e-178	623.6
Lsi07g00734	.	3	704	B3 DNA Binding Superfamily	AT2G46530	50.9	4.5e-169	591.7
Lsi02g02037	.	14	390	B3 DNA Binding Superfamily	AT2G46530	72.8	1.6e-153	540.0
Lsi01g00116	.	61	428	B3 DNA Binding Superfamily	AT2G46530	51.1	3.5e-97	352.8
Lsi02g00922	.	146	499	B3 DNA Binding Superfamily	AT2G46530	51.3	2.6e-92	336.7
Lsi09g00877	.	154	326	B3 DNA Binding Superfamily	AT2G46530	54.6	1.1e-45	181.8
Lsi02g02037	.	20	386	B3 DNA Binding Superfamily	AT1G34310	52.6	9.5e-108	387.9
Lsi02g02037	.	20	385	B3 DNA Binding Superfamily	AT1G35540	53.8	2.9e-112	402.9
Lsi02g02037	.	20	386	B3 DNA Binding Superfamily	AT1G35520	53.3	2.5e-108	389.8
Lsi10g01262	.	4	687	B3 DNA Binding Superfamily	AT4G30080	57.4	1.6e-212	736.1
Lsi01g01337	.	7	723	B3 DNA Binding Superfamily	AT4G30080	56.4	4.7e-212	734.6
Lsi08g00720	.	5	683	B3 DNA Binding Superfamily	AT4G30080	54.5	3.8e-198	688.3
Lsi09g00162	.	54	667	B3 DNA Binding Superfamily	AT3G61830	51.5	9.3e-158	553.9
Lsi02g02037	.	50	455	B3 DNA Binding Superfamily	AT3G61830	62.6	1.3e-138	490.3
Lsi01g00116	.	111	424	B3 DNA Binding Superfamily	AT3G61830	52.5	3.6e-85	312.8
Lsi02g00922	.	177	495	B3 DNA Binding Superfamily	AT3G61830	50.9	3.2e-81	299.7
Lsi11g00146	.	1	1096	B3 DNA Binding Superfamily	AT1G19220	61.7	0.0e+00	1171.8
Lsi06g01682	.	41	396	B3 DNA Binding Superfamily	AT1G19220	52.2	4.4e-103	373.2
Lsi01g00279	.	46	379	B3 DNA Binding Superfamily	AT1G19220	50.1	3.9e-91	333.6
Lsi09g00877	.	140	326	B3 DNA Binding Superfamily	AT1G19220	68.6	2.0e-71	268.1
Lsi02g02037	.	20	388	B3 DNA Binding Superfamily	AT1G35240	52.7	5.0e-109	392.1
Lsi02g02037	.	20	386	B3 DNA Binding Superfamily	AT1G34410	53.1	2.1e-110	396.7
Lsi02g02037	.	20	386	B3 DNA Binding Superfamily	AT1G34390	54.6	6.4e-112	401.7
Lsi02g02037	.	20	224	B3 DNA Binding Superfamily	AT1G43950	55.6	1.2e-58	223.4
Lsi09g00162	.	24	228	B3 DNA Binding Superfamily	AT1G43950	55.3	7.5e-58	220.7
Lsi06g01682	.	41	246	B3 DNA Binding Superfamily	AT1G43950	52.9	2.9e-57	218.8
Lsi01g00279	.	149	443	B3 DNA Binding Superfamily	AT2G33860	66.4	1.4e-111	400.2
Lsi10g01284	.	168	451	B3 DNA Binding Superfamily	AT2G33860	57.3	1.0e-90	330.9
Lsi06g01682	.	147	436	B3 DNA Binding Superfamily	AT2G33860	51.0	3.3e-76	282.7
Lsi01g00116	.	187	418	B3 DNA Binding Superfamily	AT2G33860	56.0	3.5e-70	262.7
Lsi11g00146	.	126	356	B3 DNA Binding Superfamily	AT2G33860	54.5	6.6e-69	258.5
Lsi02g00922	.	253	489	B3 DNA Binding Superfamily	AT2G33860	54.9	4.3e-68	255.8
Lsi02g02037	.	125	352	B3 DNA Binding Superfamily	AT2G33860	52.8	2.3e-66	250.0
Lsi09g00162	.	129	356	B3 DNA Binding Superfamily	AT2G33860	50.6	1.1e-63	241.1
Lsi10g01284	.	48	789	B3 DNA Binding Superfamily	AT5G60450	60.4	1.5e-246	849.4
Lsi01g00279	.	41	445	B3 DNA Binding Superfamily	AT5G60450	56.1	2.1e-123	440.3
Lsi02g00922	.	146	508	B3 DNA Binding Superfamily	AT5G60450	50.9	7.2e-100	362.1
Lsi11g00146	.	14	374	B3 DNA Binding Superfamily	AT5G60450	50.1	7.9e-99	358.6
Lsi09g00877	.	155	326	B3 DNA Binding Superfamily	AT5G60450	54.4	4.6e-46	183.3
Lsi04g01726	.	8	966	B3 DNA Binding Superfamily	AT1G19850	59.1	3.8e-286	981.1
Lsi02g02037	.	20	351	B3 DNA Binding Superfamily	AT1G19850	50.3	9.0e-94	342.0
Lsi09g00877	.	150	326	B3 DNA Binding Superfamily	AT1G19850	63.1	2.5e-64	244.2
Lsi01g00116	.	61	993	B3 DNA Binding Superfamily	AT1G30330	66.1	0.0e+00	1170.2
Lsi02g00922	.	142	1041	B3 DNA Binding Superfamily	AT1G30330	70.0	0.0e+00	1155.6
Lsi09g00876	.	4	684	B3 DNA Binding Superfamily	AT1G30330	51.3	4.9e-159	558.9
Lsi06g01682	.	41	395	B3 DNA Binding Superfamily	AT1G30330	52.8	2.7e-101	367.1
Lsi02g02037	.	7	352	B3 DNA Binding Superfamily	AT1G30330	53.3	2.2e-98	357.5
Lsi09g00162	.	24	397	B3 DNA Binding Superfamily	AT1G30330	50.1	4.8e-98	356.3
Lsi09g00877	.	140	326	B3 DNA Binding Superfamily	AT1G30330	86.7	3.6e-93	340.1
Lsi11g00146	.	1	1093	B3 DNA Binding Superfamily	AT5G20730	58.3	0.0e+00	1102.4
Lsi02g00922	.	142	618	B3 DNA Binding Superfamily	AT5G20730	57.7	1.3e-145	514.6
Lsi06g01682	.	41	393	B3 DNA Binding Superfamily	AT5G20730	52.3	6.8e-102	369.4
Lsi09g00876	.	2	290	B3 DNA Binding Superfamily	AT5G20730	50.5	3.7e-68	257.3
Lsi09g00877	.	140	326	B3 DNA Binding Superfamily	AT5G20730	65.4	1.4e-67	255.4
Lsi09g00876	.	2	653	B3 DNA Binding Superfamily	AT5G37020	60.0	8.3e-199	690.6
Lsi01g00116	.	157	955	B3 DNA Binding Superfamily	AT5G37020	51.6	9.1e-198	687.2
Lsi02g00922	.	223	1004	B3 DNA Binding Superfamily	AT5G37020	50.5	1.7e-183	639.8
Lsi11g00146	.	96	420	B3 DNA Binding Superfamily	AT5G37020	62.4	3.8e-111	399.4
Lsi11g00812	.	104	432	B3 DNA Binding Superfamily	AT5G37020	51.8	6.5e-87	318.9
Lsi02g02037	.	118	352	B3 DNA Binding Superfamily	AT5G37020	56.1	2.7e-72	270.4
Lsi09g00877	.	237	326	B3 DNA Binding Superfamily	AT5G37020	88.9	3.4e-43	173.7
Lsi09g00162	.	18	672	B3 DNA Binding Superfamily	AT4G23980	57.2	9.0e-197	683.7
Lsi07g00734	.	2	730	B3 DNA Binding Superfamily	AT4G23980	52.9	3.5e-193	671.8
Lsi02g02037	.	17	588	B3 DNA Binding Superfamily	AT4G23980	54.8	1.1e-157	553.9
Lsi01g00116	.	80	436	B3 DNA Binding Superfamily	AT4G23980	51.3	2.3e-96	350.1
Lsi06g01682	.	1	846	B3 DNA Binding Superfamily	AT5G62000	61.2	4.0e-293	1004.2
Lsi02g02037	.	20	352	B3 DNA Binding Superfamily	AT5G62000	68.5	1.6e-135	480.7
Lsi11g00146	.	23	381	B3 DNA Binding Superfamily	AT5G62000	54.0	4.4e-106	382.9
Lsi09g00877	.	160	326	B3 DNA Binding Superfamily	AT5G62000	57.5	6.5e-49	193.0
Lsi01g00307	.	26	133	B3 DNA Binding Superfamily	AT1G28300	69.4	1.7e-38	157.1
Lsi02g01207	.	4	736	B3 DNA Binding Superfamily	AT2G30470	53.0	6.3e-200	694.5
Lsi03g02281	.	29	495	B3 DNA Binding Superfamily	AT2G30470	57.0	1.9e-132	470.3
Lsi03g02281	.	28	571	B3 DNA Binding Superfamily	AT4G32010	52.5	3.8e-141	499.2
Lsi11g00146	.	1	1096	B3 DNA Binding Superfamily	AT1G19220	61.7	0.0e+00	1171.8
Lsi06g01682	.	41	396	B3 DNA Binding Superfamily	AT1G19220	52.2	4.4e-103	373.2
Lsi01g00279	.	46	379	B3 DNA Binding Superfamily	AT1G19220	50.1	3.9e-91	333.6
Lsi09g00877	.	140	326	B3 DNA Binding Superfamily	AT1G19220	68.6	2.0e-71	268.1
Lsi04g01726	.	8	966	B3 DNA Binding Superfamily	AT1G19850	59.1	3.8e-286	981.1
Lsi02g02037	.	20	351	B3 DNA Binding Superfamily	AT1G19850	50.3	9.0e-94	342.0
Lsi09g00877	.	150	326	B3 DNA Binding Superfamily	AT1G19850	63.1	2.5e-64	244.2
Lsi01g00116	.	61	993	B3 DNA Binding Superfamily	AT1G30330	66.1	0.0e+00	1170.2
Lsi02g00922	.	142	1041	B3 DNA Binding Superfamily	AT1G30330	70.0	0.0e+00	1155.6
Lsi09g00876	.	4	684	B3 DNA Binding Superfamily	AT1G30330	51.3	4.9e-159	558.9
Lsi06g01682	.	41	395	B3 DNA Binding Superfamily	AT1G30330	52.8	2.7e-101	367.1
Lsi02g02037	.	7	352	B3 DNA Binding Superfamily	AT1G30330	53.3	2.2e-98	357.5
Lsi09g00162	.	24	397	B3 DNA Binding Superfamily	AT1G30330	50.1	4.8e-98	356.3
Lsi09g00877	.	140	326	B3 DNA Binding Superfamily	AT1G30330	86.7	3.6e-93	340.1
Lsi11g00146	.	1	1093	B3 DNA Binding Superfamily	AT5G20730	58.3	0.0e+00	1102.4
Lsi02g00922	.	142	618	B3 DNA Binding Superfamily	AT5G20730	57.7	1.3e-145	514.6
Lsi06g01682	.	41	393	B3 DNA Binding Superfamily	AT5G20730	52.3	6.8e-102	369.4
Lsi09g00876	.	2	290	B3 DNA Binding Superfamily	AT5G20730	50.5	3.7e-68	257.3
Lsi09g00877	.	140	326	B3 DNA Binding Superfamily	AT5G20730	65.4	1.4e-67	255.4
Lsi09g00876	.	2	653	B3 DNA Binding Superfamily	AT5G37020	60.0	8.3e-199	690.6
Lsi01g00116	.	157	955	B3 DNA Binding Superfamily	AT5G37020	51.6	9.1e-198	687.2
Lsi02g00922	.	223	1004	B3 DNA Binding Superfamily	AT5G37020	50.5	1.7e-183	639.8
Lsi11g00146	.	96	420	B3 DNA Binding Superfamily	AT5G37020	62.4	3.8e-111	399.4
Lsi11g00812	.	104	432	B3 DNA Binding Superfamily	AT5G37020	51.8	6.5e-87	318.9
Lsi02g02037	.	118	352	B3 DNA Binding Superfamily	AT5G37020	56.1	2.7e-72	270.4
Lsi09g00877	.	237	326	B3 DNA Binding Superfamily	AT5G37020	88.9	3.4e-43	173.7
Lsi01g00279	.	149	443	B3 DNA Binding Superfamily	AT2G33860	66.4	1.4e-111	400.2
Lsi10g01284	.	168	451	B3 DNA Binding Superfamily	AT2G33860	57.3	1.0e-90	330.9
Lsi06g01682	.	147	436	B3 DNA Binding Superfamily	AT2G33860	51.0	3.3e-76	282.7
Lsi01g00116	.	187	418	B3 DNA Binding Superfamily	AT2G33860	56.0	3.5e-70	262.7
Lsi11g00146	.	126	356	B3 DNA Binding Superfamily	AT2G33860	54.5	6.6e-69	258.5
Lsi02g00922	.	253	489	B3 DNA Binding Superfamily	AT2G33860	54.9	4.3e-68	255.8
Lsi02g02037	.	125	352	B3 DNA Binding Superfamily	AT2G33860	52.8	2.3e-66	250.0
Lsi09g00162	.	129	356	B3 DNA Binding Superfamily	AT2G33860	50.6	1.1e-63	241.1
Lsi10g01284	.	48	789	B3 DNA Binding Superfamily	AT5G60450	60.4	1.5e-246	849.4
Lsi01g00279	.	41	445	B3 DNA Binding Superfamily	AT5G60450	56.1	2.1e-123	440.3
Lsi02g00922	.	146	508	B3 DNA Binding Superfamily	AT5G60450	50.9	7.2e-100	362.1
Lsi11g00146	.	14	374	B3 DNA Binding Superfamily	AT5G60450	50.1	7.9e-99	358.6
Lsi09g00877	.	155	326	B3 DNA Binding Superfamily	AT5G60450	54.4	4.6e-46	183.3
Lsi11g00096	.	54	703	B3 DNA Binding Superfamily	AT1G59750	62.0	1.2e-220	763.1
Lsi02g02037	.	14	405	B3 DNA Binding Superfamily	AT1G59750	63.1	9.5e-141	497.7
Lsi01g00116	.	83	449	B3 DNA Binding Superfamily	AT1G59750	55.0	1.4e-107	387.5
Lsi11g00146	.	23	380	B3 DNA Binding Superfamily	AT1G59750	53.4	2.7e-103	373.2
Lsi02g00922	.	149	514	B3 DNA Binding Superfamily	AT1G59750	53.2	6.0e-103	372.1
Lsi09g00877	.	163	326	B3 DNA Binding Superfamily	AT1G59750	56.4	2.7e-47	187.2
Lsi06g01682	.	1	846	B3 DNA Binding Superfamily	AT5G62000	61.2	4.0e-293	1004.2
Lsi02g02037	.	20	352	B3 DNA Binding Superfamily	AT5G62000	68.5	1.6e-135	480.7
Lsi11g00146	.	23	381	B3 DNA Binding Superfamily	AT5G62000	54.0	4.4e-106	382.9
Lsi09g00877	.	160	326	B3 DNA Binding Superfamily	AT5G62000	57.5	6.5e-49	193.0
Lsi09g00162	.	18	671	B3 DNA Binding Superfamily	AT2G46530	54.0	1.1e-178	623.6
Lsi07g00734	.	3	704	B3 DNA Binding Superfamily	AT2G46530	50.9	4.5e-169	591.7
Lsi02g02037	.	14	390	B3 DNA Binding Superfamily	AT2G46530	72.8	1.6e-153	540.0
Lsi01g00116	.	61	428	B3 DNA Binding Superfamily	AT2G46530	51.1	3.5e-97	352.8
Lsi02g00922	.	146	499	B3 DNA Binding Superfamily	AT2G46530	51.3	2.6e-92	336.7
Lsi09g00877	.	154	326	B3 DNA Binding Superfamily	AT2G46530	54.6	1.1e-45	181.8
Lsi09g00162	.	54	667	B3 DNA Binding Superfamily	AT3G61830	51.5	9.3e-158	553.9
Lsi02g02037	.	50	455	B3 DNA Binding Superfamily	AT3G61830	62.6	1.3e-138	490.3
Lsi01g00116	.	111	424	B3 DNA Binding Superfamily	AT3G61830	52.5	3.6e-85	312.8
Lsi02g00922	.	177	495	B3 DNA Binding Superfamily	AT3G61830	50.9	3.2e-81	299.7
Lsi09g00162	.	18	672	B3 DNA Binding Superfamily	AT4G23980	57.2	9.0e-197	683.7
Lsi07g00734	.	2	730	B3 DNA Binding Superfamily	AT4G23980	52.9	3.5e-193	671.8
Lsi02g02037	.	17	588	B3 DNA Binding Superfamily	AT4G23980	54.8	1.1e-157	553.9
Lsi01g00116	.	80	436	B3 DNA Binding Superfamily	AT4G23980	51.3	2.3e-96	350.1
Lsi02g02037	.	20	386	B3 DNA Binding Superfamily	AT1G34310	52.6	9.5e-108	387.9
Lsi02g02037	.	20	386	B3 DNA Binding Superfamily	AT1G34390	54.6	6.4e-112	401.7
Lsi02g02037	.	20	386	B3 DNA Binding Superfamily	AT1G34410	53.1	2.1e-110	396.7
Lsi02g02037	.	20	388	B3 DNA Binding Superfamily	AT1G35240	52.7	5.0e-109	392.1
Lsi02g02037	.	20	386	B3 DNA Binding Superfamily	AT1G35520	53.3	2.5e-108	389.8
Lsi02g02037	.	20	385	B3 DNA Binding Superfamily	AT1G35540	53.8	2.9e-112	402.9
Lsi02g02037	.	20	224	B3 DNA Binding Superfamily	AT1G43950	55.6	1.2e-58	223.4
Lsi09g00162	.	24	228	B3 DNA Binding Superfamily	AT1G43950	55.3	7.5e-58	220.7
Lsi06g01682	.	41	246	B3 DNA Binding Superfamily	AT1G43950	52.9	2.9e-57	218.8
Lsi10g01262	.	3	687	B3 DNA Binding Superfamily	AT2G28350	58.2	3.0e-211	731.9
Lsi01g01337	.	6	723	B3 DNA Binding Superfamily	AT2G28350	52.9	4.4e-194	674.9
Lsi08g00720	.	13	682	B3 DNA Binding Superfamily	AT2G28350	51.9	1.6e-175	613.2
Lsi10g01262	.	4	687	B3 DNA Binding Superfamily	AT4G30080	57.4	1.6e-212	736.1
Lsi01g01337	.	7	723	B3 DNA Binding Superfamily	AT4G30080	56.4	4.7e-212	734.6
Lsi08g00720	.	5	683	B3 DNA Binding Superfamily	AT4G30080	54.5	3.8e-198	688.3
Lsi09g00114	.	49	163	B3 DNA Binding Superfamily	AT1G01030	82.8	2.9e-53	206.1
Lsi04g00288	.	183	308	B3 DNA Binding Superfamily	AT1G01030	62.2	2.0e-38	156.8
Lsi04g00288	.	1	350	B3 DNA Binding Superfamily	AT1G25560	58.5	4.1e-106	381.7
Lsi09g01022	.	29	317	B3 DNA Binding Superfamily	AT1G25560	61.9	1.2e-92	337.0
Lsi03g01863	.	44	155	B3 DNA Binding Superfamily	AT1G25560	67.0	2.2e-38	156.8
Lsi09g00114	.	50	158	B3 DNA Binding Superfamily	AT1G25560	66.1	4.1e-37	152.5
Lsi09g01706	.	84	201	B3 DNA Binding Superfamily	AT1G25560	60.3	1.2e-36	151.0
Lsi03g00485	.	77	337	B3 DNA Binding Superfamily	AT3G19184	55.9	5.3e-64	241.5
Lsi08g01456	.	56	279	B3 DNA Binding Superfamily	AT3G19184	52.2	2.1e-49	193.0
Lsi08g01457	.	1	190	B3 DNA Binding Superfamily	AT3G19184	54.1	7.9e-44	174.5
Lsi08g01457	.	29	197	B3 DNA Binding Superfamily	AT5G42700	60.8	2.0e-51	199.1
Lsi08g01456	.	103	280	B3 DNA Binding Superfamily	AT5G42700	53.9	4.5e-48	188.0
Lsi03g00485	.	150	322	B3 DNA Binding Superfamily	AT5G42700	50.6	4.5e-40	161.4
Lsi10g00322	.	16	380	B3 DNA Binding Superfamily	AT3G18990	58.1	5.2e-104	374.8

Syn-Orthogroups

Select	Orthogroup	Bda	Bhi	Blo	Bma	Bpe	Cam	Car	Cco	Cec	Chy	Cla	Clacu	Cma	Cme	Cmetu	Cmo	Cmu	Cone	Cpe	Cre	Csa	HCH	Hepe	Lac	Lcy	Lsi	Mch	Sed	Tan	Vvi	Total
	OG0005709	1	1	1	2	1	1	2	1	1	1	1	1	2	1	1	2	1	2	2	1	1	1	1	1	1	1	1	3	1	1	38

Regulatory proteins

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	26166	PF02309	AUX_IAA	2.20E-07	CL0072	Lsi	TF

Transcriptome

Select	Gene	Chr	Type	da1	da2	da3	da4	da5	da6	da7	da8	da9	da10
	Lsi11g00812	Lsi_Chr11	FPKM	17.748449	20.696953	3.68247	3.568702	0.797541	0.606369	1.080004	14.277116	12.897311	13.318254