Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi11g00816 | ATGGCTTCCAATGCCTTCTTTTCTCTCTTTTCAATCCTTCTTGTTTCTCTTATTACTAAGTTCATATTCCCAATGTCTCCACTTGCTTTTGCAGTAACCATCTTCCTTGTTCCTCTCCTTACTTATATCATCTCTTCCATGGCCTTCTCCTCCAAGCTTCCTCCTGGCCCTCTCTCCATTCCCATCTTTGGCAATTGGCTCCAAGTTGGTAATGATCTCAACCATCGCCTTCTTGCTTCCTTCTGCAAGAGATTTGGCTCCATATTCCTCTTGAAGCTCGGTTCCAAGAACCTCGTTGTCGTGTCTGATGCCGAGCTTGCTAGCCAAGTTCTCCATGCACAAGGCGTTGAGTTTGGCTCTCGCCCTCGAAATGTCGTGTTTGATATCTTCACTGGAAATGGTCAGGATATGGTGTTTACGGTTTATGGAGACCATTGGCGTAAGATGCGTAGAATCATGACGTTGCCGTTTTTTACGAACAAAGTTGTGCATAACTACAGTGATATGTGGGAGGATGAGATGGACTCTGTGGTTCGTGACCTTAAGAGTAACAAGAAGTTTCAATCAGAAGGGATAGTCATTAGAAAGCGTTTGCAATTGATGTTGTATAATATCATGTATCGAATGATGTTTGATGCAAAGTTTGAGTCCCAAGACGATCCTTTGTTCATTGAAGCAACTCGATTCAACTCAGAAAGGAGTCGATTGGCACAAAGCTTTGAGTACAATTATGGAGATTTCATTCCGTTGCTCAGACCTTTCTTGCGAGGTTACTTGAACAAGTGTAGAGATTTGCAAAGTAGGAGATTGGACTTTTTCAACAAAAACTACGTGGAGAAAAGAAGGAAGATAATGGCTGCCAATGGAGATAAGCACAAGATAAGTTGTGCCATGGATCATATCATAGACGCTCAACTGAAAGGTGAGATAAGTGAAGAGAATGTGATTTACATTGTAGAGAACATCAACGTGGCCGCTATAGAAACGACACTTTGGTCAATGGAATGGGCGATAGCTGAGCTAGTGAATCATCCAGAAATCCAACACAAGATTCGAGAAGAGATTGCTAATGTCCTAGAAGGAAAGGAAGTGACTGAATCTAACCTTCATGAATTGCCATACTTGCAAGCAACGGTAAAAGAAACACTTAGGTTGCACACTCCAATTCCATTGTTGGTGCCACATATGAACTTGGAAGAAGCAAAGCTAGGAGGGTACACCATTCCAAAGGAATCCAAGGTGGTAGTGAATGCTTGGTGGTTGGCTAATAACCCTGAGTGGTGGAAAAATCCAGAAGAATTTAGGCCAGAGAGGTTCTTTGAAGAAGAAAGTGGAACAGAGGCTGTCGCTGCAGGGAAAGTGGATTATCGATTCTTACCATTTGGAGTTGGAAGAAGGAGTTGCCCTGGAATTGTCTTAGCAATGCCAATCTTAGGACTCATTGTTGCTAAGTTAGTTTCAAAGTTTGAAATGAAGCCTCTGAGTAGATTGGAGAAGATTGATGTCAGTGAGAAAGGTGGACAATTTAGCTTGCATATCGCCAACCACTCAACGGTTGTTTTTAACCCCATAATGACTTAA | 1581 | 42.25 | MASNAFFSLFSILLVSLITKFIFPMSPLAFAVTIFLVPLLTYIISSMAFSSKLPPGPLSIPIFGNWLQVGNDLNHRLLASFCKRFGSIFLLKLGSKNLVVVSDAELASQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSDMWEDEMDSVVRDLKSNKKFQSEGIVIRKRLQLMLYNIMYRMMFDAKFESQDDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCRDLQSRRLDFFNKNYVEKRRKIMAANGDKHKISCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEIQHKIREEIANVLEGKEVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPEWWKNPEEFRPERFFEEESGTEAVAAGKVDYRFLPFGVGRRSCPGIVLAMPILGLIVAKLVSKFEMKPLSRLEKIDVSEKGGQFSLHIANHSTVVFNPIMT | 526 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 10072961 | 10074851 | - | Lsi11G008160.1 | Lsi11g00816 | 673983 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi11g00816 | 526 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 4 | 525 | - | - | |
Lsi11g00816 | 526 | PANTHER | OS02G0467000 PROTEIN | 4 | 525 | - | - | |
Lsi11g00816 | 526 | Gene3D | Cytochrome P450 | 48 | 520 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00816 | 526 | PRINTS | E-class P450 group I signature | 334 | 360 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00816 | 526 | PRINTS | E-class P450 group I signature | 376 | 394 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00816 | 526 | PRINTS | E-class P450 group I signature | 458 | 468 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00816 | 526 | PRINTS | E-class P450 group I signature | 106 | 127 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00816 | 526 | PRINTS | E-class P450 group I signature | 314 | 331 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00816 | 526 | PRINTS | E-class P450 group I signature | 468 | 491 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00816 | 526 | PRINTS | E-class P450 group I signature | 82 | 101 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00816 | 526 | PRINTS | E-class P450 group I signature | 201 | 219 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00816 | 526 | PRINTS | E-class P450 group I signature | 417 | 441 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00816 | 526 | Pfam | Cytochrome P450 | 54 | 514 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00816 | 526 | PRINTS | P450 superfamily signature | 377 | 388 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00816 | 526 | PRINTS | P450 superfamily signature | 459 | 468 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00816 | 526 | PRINTS | P450 superfamily signature | 325 | 342 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00816 | 526 | SUPERFAMILY | Cytochrome P450 | 54 | 506 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00816 | 526 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 461 | 470 | IPR017972 | GO:0005506|GO:0016705 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi11g00816 | Lsi-Chr11:10072961 | Lsi03g01628 | Lsi-Chr3:27403667 | 1.59E-77 | dispersed | |
Lsi11g00815 | Lsi-Chr11:10061167 | Lsi11g00816 | Lsi-Chr11:10072961 | 0 | tandem | |
Lsi11g00816 | Lsi-Chr11:10072961 | Lsi11g00817 | Lsi-Chr11:10082791 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi11g00816 | K00487 | - | csv:105434566 | 1009.98 |