Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi11g00906 ATGTCCACTCTTTCTTGCCAACCTTCCGATTTGGTGCCACTCCTTGGCTCATCAGCCACCACCAATTCCACCGCCATAGCCGAGTTCTTATGCTCAAGATTCACCACCATAGCCACCACTTTCAGCTCCACCACCTATGCCGTCGACAACACCTACCTCCTCTTTTCTGCCTACCTCGTCTTCGCCATGCAGCTCGGCTTTGCCATGCTTTGCGCTGGCTCGGTCCGTGCCAAAAACACGATGAATATCATGCTCACCAACGTCCTCGACGCCGCTGCCGGTGGCCTCTCTTACTACCTCTTTGGCTTTGCCTTTGCCTTTGGCATCACCAGTGGCTCCATAGCTGAGCGAACCCAATTTGTTGCCTATCTAATCTACTCCACTATTCTAACTGGCTTCATCTACCCTATAGTCTCCCACTGGTTCTGGTCTGCTGACGGGTGGGCCAGCCCAACCCGACCCGATAACCTCATATTCAACTCAGGTGCGATCGACTTCGCCGGGTCCGGTGTGGTCCACATGGTTGGTGGAATAGCTGGTCTCTGGGGAGCTTTAATCGAAGGCCCTCGGATTGGTCGGTTCGATCGATCAGGTCGATCTGTCGCCCTTCGCGGCCACAGCGCATCACTTGTAGTTCTTGGCTCTTTCCTCCTTTGGTTTGGTTGGTACGGATTTAATCCCGGCTCATTCTTAACAATCTCCAAATCCTACAATGACGGTCGTCCTTACTACGGCCAATGGAGCGCCATAGGTCGAACTGGAGTCACCACAACACTAGCCGGATGCACAGCTGCCTTAACAACCCTCTTCGCAAAACGCCTATTAGTCGGGCATTGGAACGTAATCGACGTGTGTAATGGTCTGTTAGGCGGGTTTGCCGCCATCACATCGGGTTGCGCCGTGGTCGAGCCATGGGCGGCAGTGATATGTGGTTTCGTAGCATCATGGGTGTTAATTGGATTAAACAAGCTAGCCGAGAAGGTAAGCTACGACGACCCATTAGAGGCGGCGCAATTGCACGGCGGGTGTGGGGCATGGGGTTTAATATTCACAGGATTATTCGCAACAAAGAAATACGTCGGTGAGGTATATGAAGTCGGGCGGCCGTTCGGATTGTTGATGGGCGGCGGAGGGAAGCTGCTGGCAGCGCAGGTGGTGGAGATAGTAGCGATAATAGGGTGGGTGTCAGTAACAATGGGGGGTTTGTTTTATGGGCTGAAGAAAGTGAAACTATTAAGAATATCAAGAGAGGATGAAATGGCAGGGATGGATTTGACAAGGCATGGGGGATTTGCTTATGTATATAATGATGAGGAAGATCTATCAGAGAAGCCTTCTGGGTTTATGATGAGGAGGATTGAGCCCACTGATGCTAGTTCTCCTGAGGAGAATACTTCTTCTGGGATGGGGGCTGTTTGA 1419 51.87 MSTLSCQPSDLVPLLGSSATTNSTAIAEFLCSRFTTIATTFSSTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGITSGSIAERTQFVAYLIYSTILTGFIYPIVSHWFWSADGWASPTRPDNLIFNSGAIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRSGRSVALRGHSASLVVLGSFLLWFGWYGFNPGSFLTISKSYNDGRPYYGQWSAIGRTGVTTTLAGCTAALTTLFAKRLLVGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAVICGFVASWVLIGLNKLAEKVSYDDPLEAAQLHGGCGAWGLIFTGLFATKKYVGEVYEVGRPFGLLMGGGGKLLAAQVVEIVAIIGWVSVTMGGLFYGLKKVKLLRISREDEMAGMDLTRHGGFAYVYNDEEDLSEKPSGFMMRRIEPTDASSPEENTSSGMGAV 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12298731 12301001 - Lsi11G009060.1 Lsi11g00906 674073

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi11g00906 472 Gene3D Ammonium transporter AmtB like domains 110 449 IPR029020 -
Lsi11g00906 472 Gene3D Ammonium transporter AmtB like domains 31 109 IPR029020 -
Lsi11g00906 472 TIGRFAM amt: ammonium transporter 104 433 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lsi11g00906 472 ProSitePatterns Ammonium transporters signature. 165 190 IPR018047 GO:0008519|GO:0016020|GO:0072488
Lsi11g00906 472 SUPERFAMILY Ammonium transporter 46 414 - -
Lsi11g00906 472 Pfam Ammonium Transporter Family 52 108 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lsi11g00906 472 Pfam Ammonium Transporter Family 104 433 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lsi11g00906 472 PANTHER AMMONIUM TRANSPORTER 106 462 - -
Lsi11g00906 472 PANTHER AMMONIUM TRANSPORTER 5 108 - -
Lsi11g00906 472 PANTHER AMMONIUM TRANSPORTER 106 462 - -
Lsi11g00906 472 PANTHER AMMONIUM TRANSPORTER 5 108 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi11g00906 K03320 amt, AMT, MEP; ammonium transporter, Amt family K07573 csv:101217871 859.751
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi11g00906 Lsi-Chr11:12298731 Lsi11g00907 Lsi-Chr11:12336294 0 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lsi02g01843 . 42 338 Inorganic Solute Cotransporters AT5G59520 52.1 1.1e-87 320.5
Lsi02g02261 . 22 686 Inorganic Solute Cotransporters AT4G02700 68.5 7.6e-260 893.3
Lsi05g01632 . 10 627 Inorganic Solute Cotransporters AT4G02700 60.7 2.1e-225 778.9
Lsi06g00888 . 10 641 Inorganic Solute Cotransporters AT4G02700 51.5 1.6e-188 656.4
Lsi09g00960 . 24 650 Inorganic Solute Cotransporters AT4G02700 51.1 1.1e-186 650.2
Lsi09g00959 . 24 650 Inorganic Solute Cotransporters AT4G02700 51.1 1.1e-186 650.2
Lsi11g00133 . 158 615 Inorganic Solute Cotransporters AT1G23090 69.8 8.3e-190 660.2
Lsi02g02261 . 151 662 Inorganic Solute Cotransporters AT1G23090 53.2 3.8e-150 528.5
Lsi05g01632 . 139 608 Inorganic Solute Cotransporters AT1G23090 51.2 1.9e-138 489.6
Lsi09g00960 . 162 653 Inorganic Solute Cotransporters AT1G23090 51.7 1.6e-137 486.5
Lsi09g00959 . 162 653 Inorganic Solute Cotransporters AT1G23090 51.7 1.6e-137 486.5
Lsi02g02778 . 1 767 Inorganic Solute Cotransporters AT3G15990 58.0 1.3e-219 759.6
Lsi11g00133 . 8 617 Inorganic Solute Cotransporters AT3G15990 59.8 5.9e-212 734.2
Lsi02g02261 . 5 661 Inorganic Solute Cotransporters AT3G15990 55.9 2.0e-204 709.1
Lsi09g00960 . 32 651 Inorganic Solute Cotransporters AT3G15990 52.6 3.3e-186 648.7
Lsi09g00959 . 32 651 Inorganic Solute Cotransporters AT3G15990 52.6 3.3e-186 648.7
Lsi04g02349 . 15 683 Inorganic Solute Cotransporters AT3G15990 50.1 6.8e-184 641.0
Lsi05g01632 . 10 606 Inorganic Solute Cotransporters AT3G15990 51.6 9.2e-181 630.6
Lsi06g00888 . 3 623 Inorganic Solute Cotransporters AT5G19600 67.8 2.6e-244 841.6
Lsi02g02261 . 32 673 Inorganic Solute Cotransporters AT5G19600 51.9 3.4e-188 655.2
Lsi05g01632 . 12 619 Inorganic Solute Cotransporters AT5G19600 51.3 4.0e-181 631.7
Lsi02g01675 . 24 660 Inorganic Solute Cotransporters AT5G13550 73.5 1.7e-273 938.7
Lsi02g02778 . 1 767 Inorganic Solute Cotransporters AT3G15990 58.0 1.3e-219 759.6
Lsi11g00133 . 8 617 Inorganic Solute Cotransporters AT3G15990 59.8 5.9e-212 734.2
Lsi02g02261 . 5 661 Inorganic Solute Cotransporters AT3G15990 55.9 2.0e-204 709.1
Lsi09g00960 . 32 651 Inorganic Solute Cotransporters AT3G15990 52.6 3.3e-186 648.7
Lsi09g00959 . 32 651 Inorganic Solute Cotransporters AT3G15990 52.6 3.3e-186 648.7
Lsi04g02349 . 15 683 Inorganic Solute Cotransporters AT3G15990 50.1 6.8e-184 641.0
Lsi05g01632 . 10 606 Inorganic Solute Cotransporters AT3G15990 51.6 9.2e-181 630.6
Lsi09g00960 . 23 657 Inorganic Solute Cotransporters AT4G08620 71.2 1.6e-262 902.1
Lsi09g00959 . 23 657 Inorganic Solute Cotransporters AT4G08620 71.2 1.6e-262 902.1
Lsi04g02349 . 37 688 Inorganic Solute Cotransporters AT4G08620 69.9 6.0e-257 883.6
Lsi03g00777 . 28 584 Inorganic Solute Cotransporters AT4G08620 60.6 6.1e-201 697.6
Lsi02g02261 . 23 664 Inorganic Solute Cotransporters AT4G08620 53.2 1.1e-197 686.8
Lsi09g00958 . 90 665 Inorganic Solute Cotransporters AT4G08620 56.8 6.2e-177 617.8
Lsi07g00180 . 35 630 Inorganic Solute Cotransporters AT4G08620 51.0 2.1e-169 592.8
Lsi09g00958 . 35 663 Inorganic Solute Cotransporters AT1G77990 62.6 3.5e-223 771.5
Lsi07g00180 . 22 634 Inorganic Solute Cotransporters AT1G77990 56.7 1.3e-201 699.9
Lsi09g00960 . 35 647 Inorganic Solute Cotransporters AT1G77990 50.3 6.9e-171 597.8
Lsi09g00959 . 35 647 Inorganic Solute Cotransporters AT1G77990 50.3 6.9e-171 597.8
Lsi04g02349 . 80 681 Inorganic Solute Cotransporters AT1G77990 50.2 4.0e-163 572.0
Lsi09g00960 . 141 585 Inorganic Solute Cotransporters AT1G78000 80.4 1.1e-201 699.5
Lsi09g00959 . 141 585 Inorganic Solute Cotransporters AT1G78000 80.4 1.1e-201 699.5
Lsi04g02349 . 144 619 Inorganic Solute Cotransporters AT1G78000 73.5 5.5e-188 654.1
Lsi02g02261 . 130 598 Inorganic Solute Cotransporters AT1G78000 52.6 4.7e-139 491.5
Lsi03g00777 . 135 520 Inorganic Solute Cotransporters AT1G78000 60.9 3.7e-136 481.9
Lsi09g00958 . 154 578 Inorganic Solute Cotransporters AT1G78000 55.8 2.5e-132 469.2
Lsi07g00180 . 139 592 Inorganic Solute Cotransporters AT1G78000 54.4 6.2e-131 464.5
Lsi11g00133 . 137 543 Inorganic Solute Cotransporters AT1G78000 50.8 2.9e-120 429.1
Lsi02g01675 . 29 543 Inorganic Solute Cotransporters AT3G12520 75.4 2.2e-220 761.9
Lsi09g00960 . 1 657 Inorganic Solute Cotransporters AT1G22150 76.0 6.0e-289 989.9
Lsi09g00959 . 1 657 Inorganic Solute Cotransporters AT1G22150 76.0 6.0e-289 989.9
Lsi04g02349 . 34 692 Inorganic Solute Cotransporters AT1G22150 72.7 3.6e-273 937.6
Lsi03g00777 . 28 587 Inorganic Solute Cotransporters AT1G22150 61.7 3.9e-203 704.9
Lsi02g02261 . 21 667 Inorganic Solute Cotransporters AT1G22150 51.7 2.1e-196 682.6
Lsi09g00958 . 80 665 Inorganic Solute Cotransporters AT1G22150 52.5 1.6e-172 603.2
Lsi09g00958 . 33 667 Inorganic Solute Cotransporters AT5G10180 62.8 1.0e-222 770.0
Lsi07g00180 . 1 635 Inorganic Solute Cotransporters AT5G10180 59.5 2.9e-217 751.9
Lsi09g00960 . 46 650 Inorganic Solute Cotransporters AT5G10180 55.0 6.6e-182 634.4
Lsi09g00959 . 46 650 Inorganic Solute Cotransporters AT5G10180 55.0 6.6e-182 634.4
Lsi04g02349 . 28 684 Inorganic Solute Cotransporters AT5G10180 51.0 3.0e-174 609.0
Lsi02g02748 . 15 424 Inorganic Solute Cotransporters AT1G80310 71.3 1.0e-157 553.5
Lsi08g01146 . 48 463 Inorganic Solute Cotransporters AT1G80310 54.8 1.5e-124 443.4
Lsi08g01146 . 33 467 Inorganic Solute Cotransporters AT2G25680 62.9 6.3e-152 534.3
Lsi02g02748 . 16 424 Inorganic Solute Cotransporters AT2G25680 54.6 5.2e-122 434.9
Lsi03g01265 . 1 573 Inorganic Solute Cotransporters AT1G80830 70.2 8.5e-209 723.4
Lsi08g00455 . 44 479 Inorganic Solute Cotransporters AT1G80830 58.8 9.3e-147 517.3
Lsi03g01265 . 21 576 Inorganic Solute Cotransporters AT1G15960 70.4 8.5e-209 723.4
Lsi08g00455 . 44 476 Inorganic Solute Cotransporters AT1G15960 58.8 2.3e-145 512.7
Lsi10g00167 . 17 496 Inorganic Solute Cotransporters AT2G23150 78.6 9.6e-218 753.1
Lsi10g00167 . 16 495 Inorganic Solute Cotransporters AT1G47240 76.1 1.0e-209 726.5
Lsi10g00167 . 17 496 Inorganic Solute Cotransporters AT5G67330 78.3 2.2e-217 751.9
Lsi10g00167 . 29 496 Inorganic Solute Cotransporters AT4G18790 68.2 1.4e-182 636.3
Lsi04g00568 . 17 445 Inorganic Solute Cotransporters AT3G45060 51.3 1.6e-133 473.4
Lsi03g00136 . 5 309 Inorganic Solute Cotransporters AT3G45060 72.7 2.9e-127 452.6
Lsi03g00136 . 1 309 Inorganic Solute Cotransporters AT1G08090 83.8 7.3e-152 534.3
Lsi03g00136 . 1 309 Inorganic Solute Cotransporters AT1G08100 80.6 8.5e-145 510.8
Lsi04g00568 . 19 387 Inorganic Solute Cotransporters AT5G14570 53.1 3.1e-112 402.5
Lsi04g00568 . 1 432 Inorganic Solute Cotransporters AT1G12940 61.0 4.9e-166 581.3
Lsi03g00136 . 33 309 Inorganic Solute Cotransporters AT1G12940 59.1 4.3e-93 339.0
Lsi03g00136 . 1 309 Inorganic Solute Cotransporters AT5G60770 81.6 6.8e-150 527.7
Lsi03g00136 . 5 309 Inorganic Solute Cotransporters AT5G60780 72.7 3.4e-128 455.7
Lsi02g01027 . 5 349 Inorganic Solute Cotransporters AT4G19680 59.7 9.6e-108 387.1
Lsi01g00302 . 17 332 Inorganic Solute Cotransporters AT4G19680 53.1 1.9e-87 319.7
Lsi02g01027 . 1 349 Inorganic Solute Cotransporters AT4G19690 63.3 2.2e-117 419.1
Lsi01g00302 . 24 332 Inorganic Solute Cotransporters AT4G19690 59.1 3.0e-93 339.0
Lsi11g01590 . 41 299 Inorganic Solute Cotransporters AT1G05300 51.3 8.5e-56 214.2
Lsi04g01927 . 14 263 Inorganic Solute Cotransporters AT1G05300 52.5 5.5e-55 211.5
Lsi10g01445 . 1 296 Inorganic Solute Cotransporters AT2G30080 59.3 6.2e-104 374.4
Lsi08g01583 . 24 415 Inorganic Solute Cotransporters AT1G60960 66.8 2.3e-137 485.7
Lsi11g01590 . 41 400 Inorganic Solute Cotransporters AT2G32270 51.6 2.5e-89 325.9
Lsi04g01927 . 12 316 Inorganic Solute Cotransporters AT2G32270 50.3 9.7e-73 270.8
Lsi08g01583 . 40 415 Inorganic Solute Cotransporters AT1G10970 70.4 5.0e-131 464.5
Lsi08g01583 . 1 415 Inorganic Solute Cotransporters AT4G33020 58.6 9.0e-115 410.6
Lsi11g01590 . 68 400 Inorganic Solute Cotransporters AT3G12750 62.1 8.5e-104 374.0
Lsi04g01927 . 29 316 Inorganic Solute Cotransporters AT3G12750 51.9 1.1e-74 277.3
Lsi02g01027 . 4 349 Inorganic Solute Cotransporters AT1G31260 64.1 2.1e-118 422.5
Lsi01g00302 . 8 331 Inorganic Solute Cotransporters AT1G31260 56.0 1.8e-96 349.7
Lsi02g00549 . 199 792 Inorganic Solute Cotransporters AT4G19960 66.6 4.5e-227 784.3
Lsi02g00548 . 216 768 Inorganic Solute Cotransporters AT4G19960 59.4 6.8e-183 637.5
Lsi02g02375 . 267 456 Inorganic Solute Cotransporters AT4G19960 54.7 9.5e-60 228.4
Lsi07g00402 . 14 771 Inorganic Solute Cotransporters AT4G13420 61.0 3.3e-249 858.2
Lsi02g02374 . 90 805 Inorganic Solute Cotransporters AT4G13420 54.3 2.7e-219 758.8
Lsi02g02375 . 4 456 Inorganic Solute Cotransporters AT4G13420 54.8 9.5e-132 468.0
Lsi03g01052 . 39 217 Inorganic Solute Cotransporters AT4G13420 60.3 4.0e-53 206.8
Lsi02g01264 . 123 744 Inorganic Solute Cotransporters AT2G30070 63.8 2.7e-227 785.0
Lsi02g01554 . 116 776 Inorganic Solute Cotransporters AT2G30070 52.0 3.5e-187 651.7
Lsi03g01412 . 117 772 Inorganic Solute Cotransporters AT2G30070 51.4 3.9e-186 648.3
Lsi11g00079 . 7 813 Inorganic Solute Cotransporters AT1G60160 74.1 0.0e+00 1166.8
Lsi03g00945 . 62 880 Inorganic Solute Cotransporters AT1G60160 57.0 5.3e-250 860.9
Lsi03g01052 . 40 217 Inorganic Solute Cotransporters AT1G60160 51.4 7.4e-42 169.5
Lsi05g00431 . 1 713 Inorganic Solute Cotransporters AT3G02050 69.2 1.7e-274 942.2
Lsi02g01554 . 15 776 Inorganic Solute Cotransporters AT3G02050 55.4 1.7e-237 819.3
Lsi03g01412 . 21 772 Inorganic Solute Cotransporters AT3G02050 54.7 1.6e-235 812.8
Lsi02g01264 . 13 744 Inorganic Solute Cotransporters AT3G02050 50.6 1.5e-225 779.6
Lsi03g01412 . 1 772 Inorganic Solute Cotransporters AT5G14880 76.1 0.0e+00 1176.4
Lsi02g01554 . 9 776 Inorganic Solute Cotransporters AT5G14880 73.8 0.0e+00 1142.9
Lsi04g00532 . 1 769 Inorganic Solute Cotransporters AT5G14880 64.3 2.9e-282 968.0
Lsi04g01031 CCT 1 840 Inorganic Solute Cotransporters AT5G14880 60.3 1.2e-280 962.6
Lsi02g01264 . 9 744 Inorganic Solute Cotransporters AT5G14880 50.6 4.0e-215 745.0
Lsi03g01052 . 71 217 Inorganic Solute Cotransporters AT5G14880 51.0 3.4e-36 150.6
Lsi05g00431 . 1 712 Inorganic Solute Cotransporters AT4G23640 51.6 1.8e-199 693.0
Lsi04g01031 CCT 1 840 Inorganic Solute Cotransporters AT2G40540 76.2 0.0e+00 1259.6
Lsi03g01412 . 1 770 Inorganic Solute Cotransporters AT2G40540 63.5 3.2e-292 1001.1
Lsi02g01554 . 12 776 Inorganic Solute Cotransporters AT2G40540 63.4 3.1e-287 984.6
Lsi04g00532 . 1 769 Inorganic Solute Cotransporters AT2G40540 55.1 4.6e-243 837.8
Lsi02g01264 . 17 744 Inorganic Solute Cotransporters AT2G40540 50.8 1.5e-217 753.1
Lsi03g01052 . 70 217 Inorganic Solute Cotransporters AT2G40540 51.0 2.4e-37 154.5
Lsi03g01412 . 13 772 Inorganic Solute Cotransporters AT1G70300 76.3 0.0e+00 1157.9
Lsi02g01554 . 12 776 Inorganic Solute Cotransporters AT1G70300 72.7 0.0e+00 1129.0
Lsi04g00532 . 1 769 Inorganic Solute Cotransporters AT1G70300 65.8 4.4e-286 980.7
Lsi04g01031 CCT 1 840 Inorganic Solute Cotransporters AT1G70300 57.9 3.0e-271 931.4
Lsi02g01264 . 9 744 Inorganic Solute Cotransporters AT1G70300 51.2 3.5e-219 758.4
Lsi03g00945 . 15 880 Inorganic Solute Cotransporters AT5G09400 75.2 0.0e+00 1229.5
Lsi11g00079 . 60 813 Inorganic Solute Cotransporters AT5G09400 54.7 3.6e-241 831.6
Lsi02g00549 . 6 792 Inorganic Solute Cotransporters AT1G31120 75.9 0.0e+00 1192.9
Lsi02g00548 . 13 768 Inorganic Solute Cotransporters AT1G31120 63.3 1.8e-279 958.7
Lsi03g01052 . 71 217 Inorganic Solute Cotransporters AT1G31120 55.0 1.6e-38 158.3
Lsi02g00549 . 6 792 Inorganic Solute Cotransporters AT2G35060 76.7 0.0e+00 1192.6
Lsi02g00548 . 9 768 Inorganic Solute Cotransporters AT2G35060 64.5 4.6e-283 970.7
Lsi03g00945 . 226 880 Inorganic Solute Cotransporters AT4G33530 71.3 1.3e-256 882.5
Lsi11g00079 . 220 813 Inorganic Solute Cotransporters AT4G33530 54.7 1.5e-183 639.8
Lsi02g01843 . 1 339 Inorganic Solute Cotransporters AT1G55910 57.9 3.6e-101 365.2
Lsi02g01843 . 42 338 Inorganic Solute Cotransporters AT5G59520 52.1 1.1e-87 320.5
Lsi02g00938 . 194 1019 Inorganic Solute Cotransporters AT1G30450 84.6 0.0e+00 1412.1
Lsi02g01330 . 1 387 Inorganic Solute Cotransporters AT2G29410 54.0 3.1e-96 349.0
Lsi09g01853 . 6 419 Inorganic Solute Cotransporters AT2G46800 72.9 6.8e-134 474.2
Lsi09g01853 . 26 419 Inorganic Solute Cotransporters AT3G61940 56.5 8.2e-109 390.6
Lsi09g01853 . 3 420 Inorganic Solute Cotransporters AT3G58810 69.2 5.8e-138 487.6
Lsi09g01170 . 5 499 Inorganic Solute Cotransporters AT4G13510 80.6 5.7e-223 770.4
Lsi05g01783 . 7 498 Inorganic Solute Cotransporters AT4G13510 80.9 4.9e-222 767.3
Lsi11g00907 . 4 499 Inorganic Solute Cotransporters AT4G13510 73.1 4.4e-199 691.0
Lsi05g01060 . 4 480 Inorganic Solute Cotransporters AT4G13510 73.8 3.2e-197 684.9
Lsi11g00906 . 4 466 Inorganic Solute Cotransporters AT4G13510 67.5 8.7e-179 623.6
Lsi05g01060 . 4 479 Inorganic Solute Cotransporters AT4G28700 77.3 9.6e-210 726.5
Lsi11g00907 . 4 497 Inorganic Solute Cotransporters AT4G28700 73.9 7.8e-204 706.8
Lsi09g01170 . 15 490 Inorganic Solute Cotransporters AT4G28700 75.8 3.3e-202 701.4
Lsi05g01783 . 15 489 Inorganic Solute Cotransporters AT4G28700 77.0 3.3e-202 701.4
Lsi11g00906 . 2 453 Inorganic Solute Cotransporters AT4G28700 68.3 1.9e-181 632.5
Lsi05g01783 . 7 478 Inorganic Solute Cotransporters AT3G24290 80.5 3.5e-212 734.6
Lsi09g01170 . 10 497 Inorganic Solute Cotransporters AT3G24290 76.8 1.1e-207 719.5
Lsi11g00907 . 4 481 Inorganic Solute Cotransporters AT3G24290 74.4 3.8e-195 677.9
Lsi05g01060 . 4 479 Inorganic Solute Cotransporters AT3G24290 73.5 1.5e-194 676.0
Lsi11g00906 . 4 440 Inorganic Solute Cotransporters AT3G24290 67.8 6.0e-172 600.9
Lsi05g01783 . 7 496 Inorganic Solute Cotransporters AT3G24300 77.4 3.7e-214 741.1
Lsi09g01170 . 10 479 Inorganic Solute Cotransporters AT3G24300 79.4 7.7e-212 733.4
Lsi11g00907 . 4 499 Inorganic Solute Cotransporters AT3G24300 71.3 7.8e-196 680.2
Lsi05g01060 . 4 479 Inorganic Solute Cotransporters AT3G24300 71.5 4.4e-191 664.5
Lsi11g00906 . 4 444 Inorganic Solute Cotransporters AT3G24300 66.9 1.4e-173 606.3
Lsi11g00907 . 2 498 Inorganic Solute Cotransporters AT1G64780 79.3 3.0e-219 758.1
Lsi09g01170 . 17 496 Inorganic Solute Cotransporters AT1G64780 77.8 6.5e-206 713.8
Lsi05g01783 . 17 497 Inorganic Solute Cotransporters AT1G64780 75.7 4.0e-203 704.5
Lsi05g01060 . 6 481 Inorganic Solute Cotransporters AT1G64780 77.2 7.5e-202 700.3
Lsi11g00906 . 3 460 Inorganic Solute Cotransporters AT1G64780 73.7 1.9e-197 685.6
Lsi05g02021 . 28 1140 Inorganic Solute Cotransporters AT1G01790 61.0 0.0e+00 1175.6
Lsi03g00654 . 1 737 Inorganic Solute Cotransporters AT4G04850 63.9 5.0e-242 834.3
Lsi05g02021 . 1 1144 Inorganic Solute Cotransporters AT4G00630 62.5 0.0e+00 1240.7
Lsi01g01480 . 103 244 Inorganic Solute Cotransporters AT2G37920 82.4 2.5e-65 245.7
Lsi05g01034 . 1 540 Inorganic Solute Cotransporters AT3G54700 80.9 1.3e-257 885.6
Lsi05g01014 . 1 524 Inorganic Solute Cotransporters AT3G54700 82.4 2.5e-256 881.3
Lsi05g01727 CCT 4 521 Inorganic Solute Cotransporters AT3G54700 78.6 2.3e-246 848.2
Lsi05g01728 . 62 561 Inorganic Solute Cotransporters AT3G54700 80.1 2.2e-241 831.6
Lsi09g01236 CCT 4 523 Inorganic Solute Cotransporters AT3G54700 76.5 2.0e-237 818.5
Lsi08g00415 . 1 523 Inorganic Solute Cotransporters AT3G54700 74.3 1.2e-229 792.7
Lsi05g00071 . 5 449 Inorganic Solute Cotransporters AT3G54700 52.5 5.9e-141 498.0
Lsi05g01013 . 2 288 Inorganic Solute Cotransporters AT3G54700 79.4 1.3e-127 453.8
Lsi05g01012 . 1 214 Inorganic Solute Cotransporters AT3G54700 86.0 9.5e-107 384.4
Lsi05g01014 . 1 525 Inorganic Solute Cotransporters AT2G38940 83.4 1.6e-260 895.2
Lsi05g01034 . 1 523 Inorganic Solute Cotransporters AT2G38940 83.6 2.1e-260 894.8
Lsi05g01727 CCT 3 518 Inorganic Solute Cotransporters AT2G38940 77.9 1.4e-246 849.0
Lsi05g01728 . 63 574 Inorganic Solute Cotransporters AT2G38940 78.4 4.1e-243 837.4
Lsi09g01236 CCT 3 527 Inorganic Solute Cotransporters AT2G38940 76.2 2.7e-239 824.7
Lsi08g00415 . 1 520 Inorganic Solute Cotransporters AT2G38940 73.8 2.2e-228 788.5
Lsi05g00071 . 3 448 Inorganic Solute Cotransporters AT2G38940 51.8 2.6e-141 499.2
Lsi05g01013 . 2 289 Inorganic Solute Cotransporters AT2G38940 81.9 3.8e-132 468.8
Lsi05g01012 . 1 214 Inorganic Solute Cotransporters AT2G38940 83.6 4.7e-106 382.1
Lsi04g02418 . 3 465 Inorganic Solute Cotransporters AT1G76430 58.4 2.7e-162 568.9
Lsi05g01012 . 5 191 Inorganic Solute Cotransporters AT1G76430 56.4 4.6e-53 206.1
Lsi05g01728 . 63 562 Inorganic Solute Cotransporters AT5G43340 72.3 1.3e-214 742.7
Lsi05g01014 . 3 524 Inorganic Solute Cotransporters AT5G43340 68.0 3.1e-208 721.5
Lsi05g01034 . 3 522 Inorganic Solute Cotransporters AT5G43340 68.3 1.2e-207 719.5
Lsi05g01727 CCT 7 518 Inorganic Solute Cotransporters AT5G43340 67.0 4.0e-203 704.5
Lsi09g01236 CCT 3 522 Inorganic Solute Cotransporters AT5G43340 64.8 7.0e-200 693.7
Lsi08g00415 . 4 522 Inorganic Solute Cotransporters AT5G43340 64.1 4.4e-194 674.5
Lsi05g01013 . 1 288 Inorganic Solute Cotransporters AT5G43340 65.6 1.0e-102 370.9
Lsi05g01012 . 3 214 Inorganic Solute Cotransporters AT5G43340 67.0 9.2e-83 304.7
Lsi05g01727 CCT 3 522 Inorganic Solute Cotransporters AT5G43350 78.7 8.6e-246 846.3
Lsi05g01014 . 1 524 Inorganic Solute Cotransporters AT5G43350 77.1 1.3e-238 822.4
Lsi09g01236 CCT 3 520 Inorganic Solute Cotransporters AT5G43350 77.2 3.9e-238 820.8
Lsi05g01034 . 1 522 Inorganic Solute Cotransporters AT5G43350 77.0 1.5e-237 818.9
Lsi05g01728 . 63 561 Inorganic Solute Cotransporters AT5G43350 77.0 5.6e-229 790.4
Lsi08g00415 . 1 521 Inorganic Solute Cotransporters AT5G43350 71.9 2.8e-220 761.5
Lsi05g00071 . 3 448 Inorganic Solute Cotransporters AT5G43350 53.0 5.0e-145 511.5
Lsi04g02418 . 3 469 Inorganic Solute Cotransporters AT5G43350 50.6 2.0e-130 463.0
Lsi05g01013 . 1 288 Inorganic Solute Cotransporters AT5G43350 78.5 4.4e-125 445.3
Lsi05g01012 . 1 214 Inorganic Solute Cotransporters AT5G43350 75.2 6.4e-92 335.1
Lsi05g01727 CCT 2 521 Inorganic Solute Cotransporters AT5G43360 79.2 6.5e-246 846.7
Lsi05g01014 . 1 524 Inorganic Solute Cotransporters AT5G43360 77.5 7.8e-239 823.2
Lsi09g01236 CCT 2 520 Inorganic Solute Cotransporters AT5G43360 77.6 3.8e-238 820.8
Lsi05g01034 . 1 522 Inorganic Solute Cotransporters AT5G43360 77.4 8.6e-238 819.7
Lsi05g01728 . 63 561 Inorganic Solute Cotransporters AT5G43360 77.4 7.8e-231 796.6
Lsi08g00415 . 1 522 Inorganic Solute Cotransporters AT5G43360 71.4 8.1e-220 760.0
Lsi05g00071 . 3 448 Inorganic Solute Cotransporters AT5G43360 53.2 5.5e-144 508.1
Lsi05g01013 . 1 288 Inorganic Solute Cotransporters AT5G43360 78.8 8.9e-126 447.6
Lsi05g01012 . 1 214 Inorganic Solute Cotransporters AT5G43360 73.8 6.0e-90 328.6
Lsi05g01727 CCT 3 522 Inorganic Solute Cotransporters AT5G43370 78.5 1.9e-245 845.1
Lsi09g01236 CCT 3 520 Inorganic Solute Cotransporters AT5G43370 77.4 1.6e-239 825.5
Lsi05g01014 . 1 524 Inorganic Solute Cotransporters AT5G43370 77.0 6.0e-239 823.5
Lsi05g01034 . 1 522 Inorganic Solute Cotransporters AT5G43370 76.9 6.6e-238 820.1
Lsi05g01728 . 63 561 Inorganic Solute Cotransporters AT5G43370 76.6 1.5e-229 792.3
Lsi08g00415 . 1 521 Inorganic Solute Cotransporters AT5G43370 71.7 4.3e-221 764.2
Lsi05g00071 . 3 448 Inorganic Solute Cotransporters AT5G43370 53.0 5.9e-146 514.6
Lsi04g02418 . 3 469 Inorganic Solute Cotransporters AT5G43370 50.4 3.2e-131 465.7
Lsi05g01013 . 1 288 Inorganic Solute Cotransporters AT5G43370 78.5 4.0e-126 448.7
Lsi05g01012 . 1 214 Inorganic Solute Cotransporters AT5G43370 74.8 3.2e-91 332.8
Lsi05g01014 . 1 530 Inorganic Solute Cotransporters AT2G32830 76.2 2.3e-241 831.6
Lsi05g01727 CCT 7 518 Inorganic Solute Cotransporters AT2G32830 78.8 3.9e-241 830.9
Lsi05g01034 . 1 542 Inorganic Solute Cotransporters AT2G32830 74.9 8.6e-241 829.7
Lsi09g01236 CCT 7 528 Inorganic Solute Cotransporters AT2G32830 77.8 7.3e-240 826.6
Lsi05g01728 . 66 583 Inorganic Solute Cotransporters AT2G32830 73.9 5.8e-229 790.4
Lsi08g00415 . 1 520 Inorganic Solute Cotransporters AT2G32830 72.3 1.0e-225 779.6
Lsi05g00071 . 5 466 Inorganic Solute Cotransporters AT2G32830 52.4 1.7e-143 506.5
Lsi04g02418 . 2 467 Inorganic Solute Cotransporters AT2G32830 50.5 1.2e-133 473.8
Lsi05g01013 . 1 289 Inorganic Solute Cotransporters AT2G32830 72.9 9.2e-118 421.0
Lsi05g01012 . 1 214 Inorganic Solute Cotransporters AT2G32830 81.3 3.0e-100 362.8
Lsi04g02418 . 1 463 Inorganic Solute Cotransporters AT1G20860 58.8 2.0e-158 556.2
Lsi05g01034 . 6 516 Inorganic Solute Cotransporters AT1G20860 50.7 4.0e-135 478.8
Lsi05g01014 . 6 518 Inorganic Solute Cotransporters AT1G20860 50.4 5.8e-134 474.9
Lsi05g01012 . 6 191 Inorganic Solute Cotransporters AT1G20860 55.1 5.6e-52 202.6
Lsi03g02239 . 128 486 Inorganic Solute Cotransporters AT2G38290 76.0 2.5e-159 558.5
Lsi08g01170 . 117 456 Inorganic Solute Cotransporters AT2G38290 62.4 7.7e-121 430.6
Lsi01g00559 . 120 449 Inorganic Solute Cotransporters AT2G38290 58.0 1.5e-108 389.8
Lsi04g00590 . 41 593 Inorganic Solute Cotransporters AT3G26570 73.1 3.9e-215 744.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000371 4 5 2 4 6 5 4 5 5 5 4 5 3 5 4 4 5 4 4 5 5 3 4 4 4 5 4 5 4 1 127
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi11g00906 Lsi_Chr11 FPKM 4.406463 4.389255 6.547838 5.503121 4.070298 3.222204 3.471239 8.904375 9.128093 9.362064