Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi11g00985 | ATGATGAGTTTAAGAAGTGGAGTAATGTTGGGAATGATAACATGGTTGGTTTGGACATGGATGATTGTTGTTCATAGATGGAATCAAAGGAAGAAGACGACAGGTCCCAAAACATGGCCACTCGTAGGAGCAGCAATCGAACAGTTTTTAAATTACCACAGAATGCATGATTGGCTTCTTGGTTACCTTAATCTCTCCAAAACTGTTGTCGTTCCTATGCCTTTCACTACTTATACTTACATTGCTGACCCTGCCAATGTTCAGCATGTTCTCAAGACCAACTTTGCTAATTATCCAAAGTCTGGTGATAATTATTTATTGAAGGGTGATGTGTATCATTCATACATGGAAGTGCTTCTTGGAGATGGGATCTTCAACGTAGATGGAGAGCTGTGGAGGAAACAAAGGAAAACTGCGAGCTTCGAATTTGCATCGAAGAATTTGAGGGATTTCAGTACTTTAGTTTTCAGAGAGTACAGTCTCAAGCTATCAAATATTTTAACACAAGCCTATACTCATGAATTGTTGATGAGAATGACATTAGACTCGATATGCAAGGTGGGATTTGGAGTTGAAATTGGATCGTTGGCTCCAAATTTGCCAGAAAATGGTTTTGCCAAGGCCTTTGATACAGCCAACATGATCGTCACCCTTCGCTTCATCGATCCTTTATGGAAAATTAAAAGATTTTTGAATTTGGGATCTGAAGCTCTTCTTGACAAGTCCATCAAAACCATCGATGGTTTCACCTACTCTGTCATTGCCACAAGGAAAGAAGAGATCCTACAAGCTAAAACCACACGCAAAGATGCCAATAAGATAAAGCATGACATATTGTCAAGATTTATTGAGTTAGGGGAAGACCCAATCAACAATTTCACAAACAAAAGTTTAAGAGATATTGTTCTAAACTTCGTGATTGCTGGACGTGACACAACAGCTGCAACTCTTTCATGGGCTATTTATATGGTAATGACTCATTCTCATGTAGCCGAAAAACTTTATTCAGAGCTCAAGAGTTTTGAAGAAGAAAGAGCCAAAGAAGACAACATTTCATTGCTTCAATATCAACCAACTGATGTTCAATCCTTTGAGAGAAGAGACCCAAAGGGAATTTTGGAGGATGATGTATTGCCAGATGGGACAAAGGTAAGAGCAGGAGGAATGGTGACATATGTTCCTTACTCAATGGGAAGAATGGAATACAATTGGGGTTCTGATGCAACTTCTTTTAACCCTGAAAGATGGCTCAAACAAGGCATTTTCCACAATGAATCTCCATTTAAGTTCACAGCTTTTCAGGCTGGACCAAGGATTTGCATGGGGAAAGACTCGGCATATCTACAGATGAAAATGGCTCTTGCCATTTTGTGCAGATTCTACAAATTTAGTTTGGTGAGTGGGCATCGAGTCAACTACAGAATGATGACTATTCTCTCCATGGCTAATGGCTTGAAAGTTACCGTCGCTCTACGCTCT | 1479 | 39.69 | MMSLRSGVMLGMITWLVWTWMIVVHRWNQRKKTTGPKTWPLVGAAIEQFLNYHRMHDWLLGYLNLSKTVVVPMPFTTYTYIADPANVQHVLKTNFANYPKSGDNYLLKGDVYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTLVFREYSLKLSNILTQAYTHELLMRMTLDSICKVGFGVEIGSLAPNLPENGFAKAFDTANMIVTLRFIDPLWKIKRFLNLGSEALLDKSIKTIDGFTYSVIATRKEEILQAKTTRKDANKIKHDILSRFIELGEDPINNFTNKSLRDIVLNFVIAGRDTTAATLSWAIYMVMTHSHVAEKLYSELKSFEEERAKEDNISLLQYQPTDVQSFERRDPKGILEDDVLPDGTKVRAGGMVTYVPYSMGRMEYNWGSDATSFNPERWLKQGIFHNESPFKFTAFQAGPRICMGKDSAYLQMKMALAILCRFYKFSLVSGHRVNYRMMTILSMANGLKVTVALRS | 493 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 16390830 | 16396744 | - | Lsi11G009850.1 | Lsi11g00985 | 674152 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi11g00985 | 493 | Gene3D | Cytochrome P450 | 16 | 493 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00985 | 493 | SUPERFAMILY | Cytochrome P450 | 34 | 492 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00985 | 493 | Coils | Coil | 331 | 351 | - | - | |
Lsi11g00985 | 493 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00985 | 493 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00985 | 493 | PRINTS | E-class P450 group I signature | 392 | 402 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00985 | 493 | Pfam | Cytochrome P450 | 35 | 486 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00985 | 493 | PRINTS | P450 superfamily signature | 431 | 440 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00985 | 493 | PRINTS | P450 superfamily signature | 440 | 451 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00985 | 493 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g00985 | 493 | PANTHER | CYTOCHROME P450 704B1 | 11 | 490 | - | - | |
Lsi11g00985 | 493 | PANTHER | CYTOCHROME P450 | 11 | 490 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi05g01978 | Lsi-Chr5:26884548 | Lsi11g00985 | Lsi-Chr11:16390830 | 1.13E-86 | dispersed | |
Lsi05g01984 | Lsi-Chr5:26947579 | Lsi11g00985 | Lsi-Chr11:16390830 | 1.08E-105 | dispersed | |
Lsi11g00985 | Lsi-Chr11:16390830 | Lsi02g02534 | Lsi-Chr2:31830474 | 2.66E-103 | dispersed | |
Lsi11g00985 | Lsi-Chr11:16390830 | Lsi09g00245 | Lsi-Chr9:2581643 | 3.28E-105 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi11g00985 | K20495 | - | csv:101222076 | 823.542 |