Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi11g01051 | ATGGCTTCTTATAATTCTTCCTCTGAACTTCCTCTCAAACCCATTCCCGGCAGCTATGGCTTCTCCTTCTTCGGTCCGATCAAAGACCGTTACGATTACTTCTACTTCCAAGGCAAAGACGAATTCTTCCGTTCCCGAATTACCAAATACCGCTCCACCGTCTTCCGCGCCAACATGCCGCCGGGCCCCTTCATCTCCTCCGATTCCAGAGTCGTCGTCCTTCTCGACGCCGTCAGTTTTCCAATCCTCTTCGACACCACCAAGGTCGAAAAACGTAACATTCTCGATGGAACTTACATGCCCTCCTTGTCCTTCACCGGCGGCATTCGCACCTGCGCTTATTTGGACCCATCAGAAACAGAGCACTCTGTTCTCAAACGCCTCTTCCTCTCGTTTCTCGCCTCTCGCCATGACAGGTTCATCCCTCTGTTCCGAAGCTCCTTGTCCGAGATGTTCGTTAAGCTTGAAGATAAACTCGCGGAGAAGAAGAAGGTCGCCGATTTCAACTCGATTAGTGATTCCATGTCGTTTGATTATGTTTTCCGTCTATTCTCCGATGGAACTCCTGATTCGAAATTGGCCGCTGATGGACCTGGAATGTTCGATTTGTGGCTTGCATTTCAGCTTGCCCCACTCGTTTCCATTGGGGTTCCGAAAATTTTCTCAATTTTTGAAGATCTCATCATTCATACTATTTCCCTGCCTTTCTTCCTCGTCAAAAGTGGTTATAGGAAGCTTTACAATGCGTTTTACTCCTCCTCTGGATCATTTCTAGACGAAGCAGAGAAACAGGGGATAGACAGAGAGAAAGCGTGTCACAATTTAGTGTTTCTCGCCGGATTCAACGCGTACGGCGGAATGAAAGTGCTTTTTCCAACTTTACTGAAATGGGTCGGCATCGCCGGCGAGGATCTCCACCGGAAGCTCGCCGACGAAGTCAGGGCCACCGTGAAGGAAGAAGGCGGACTGACTTTCGCCGCCTTGGAGAAAATGAGTCTGCTGAAATCCGTCGTGTATGAAGTTCTGAGGATCGAGCCGCCGGTGCCGTTCCAGTACGCGAAAGCGAAGGAGGACATCGTGATTCAGAGCCATGATTCTTCTTTCAAGATCATGAAAGGGGAGACGATTTTCGGGTATCAGCCGTTTGCTACTAAAGATCCGAAGATTTTTGAGAATTCGGAGAAGTTCGTCGGCGATAGGTTCGTCGGAGAAGCAGGGGAGAAGCTTCTGAAGTATGTTTACTGGTCAAACGACCGGGAGACGGTGGAGCCGACGGCGGAGAACAAGCAGTGTCCGGGAAAGAATCTGGTGGTGCTGATGGGCAGAATAATTCTGGTGGAATTCTTCCTCCGTTATGATACGTTCACTGTCGACGTCACAGAGTTGCCGCTCGGTCCGGCAGTGAAGTTCAAGTCCTTAACCAAAGCCACCGTTAAGATTTAA | 1443 | 49.55 | MASYNSSSELPLKPIPGSYGFSFFGPIKDRYDYFYFQGKDEFFRSRITKYRSTVFRANMPPGPFISSDSRVVVLLDAVSFPILFDTTKVEKRNILDGTYMPSLSFTGGIRTCAYLDPSETEHSVLKRLFLSFLASRHDRFIPLFRSSLSEMFVKLEDKLAEKKKVADFNSISDSMSFDYVFRLFSDGTPDSKLAADGPGMFDLWLAFQLAPLVSIGVPKIFSIFEDLIIHTISLPFFLVKSGYRKLYNAFYSSSGSFLDEAEKQGIDREKACHNLVFLAGFNAYGGMKVLFPTLLKWVGIAGEDLHRKLADEVRATVKEEGGLTFAALEKMSLLKSVVYEVLRIEPPVPFQYAKAKEDIVIQSHDSSFKIMKGETIFGYQPFATKDPKIFENSEKFVGDRFVGEAGEKLLKYVYWSNDRETVEPTAENKQCPGKNLVVLMGRIILVEFFLRYDTFTVDVTELPLGPAVKFKSLTKATVKI | 480 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 18200999 | 18204435 | + | Lsi11G010510.1 | Lsi11g01051 | 674218 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi11g01051 | 480 | Gene3D | Cytochrome P450 | 10 | 480 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g01051 | 480 | PRINTS | E-class P450 group IV signature | 431 | 449 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g01051 | 480 | PRINTS | E-class P450 group IV signature | 331 | 347 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g01051 | 480 | PRINTS | E-class P450 group IV signature | 384 | 402 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g01051 | 480 | PANTHER | CYTOCHROME P450 26 | 9 | 457 | - | - | |
Lsi11g01051 | 480 | PANTHER | HYDROPEROXIDE LYASE | 9 | 457 | - | - | |
Lsi11g01051 | 480 | SUPERFAMILY | Cytochrome P450 | 11 | 465 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi11g01051 | 480 | Pfam | Cytochrome P450 | 305 | 414 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi08g01426 | Lsi-Chr8:22492550 | Lsi11g01051 | Lsi-Chr11:18200999 | 0 | dispersed | |
Lsi11g01051 | Lsi-Chr11:18200999 | Lsi11g01431 | Lsi-Chr11:22854898 | 5.26E-39 | dispersed | |
Lsi11g01051 | Lsi-Chr11:18200999 | Lsi11g01052 | Lsi-Chr11:18217005 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi11g01051 | K01723 | - | csv:101211324 | 872.848 |