Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi11g01051 ATGGCTTCTTATAATTCTTCCTCTGAACTTCCTCTCAAACCCATTCCCGGCAGCTATGGCTTCTCCTTCTTCGGTCCGATCAAAGACCGTTACGATTACTTCTACTTCCAAGGCAAAGACGAATTCTTCCGTTCCCGAATTACCAAATACCGCTCCACCGTCTTCCGCGCCAACATGCCGCCGGGCCCCTTCATCTCCTCCGATTCCAGAGTCGTCGTCCTTCTCGACGCCGTCAGTTTTCCAATCCTCTTCGACACCACCAAGGTCGAAAAACGTAACATTCTCGATGGAACTTACATGCCCTCCTTGTCCTTCACCGGCGGCATTCGCACCTGCGCTTATTTGGACCCATCAGAAACAGAGCACTCTGTTCTCAAACGCCTCTTCCTCTCGTTTCTCGCCTCTCGCCATGACAGGTTCATCCCTCTGTTCCGAAGCTCCTTGTCCGAGATGTTCGTTAAGCTTGAAGATAAACTCGCGGAGAAGAAGAAGGTCGCCGATTTCAACTCGATTAGTGATTCCATGTCGTTTGATTATGTTTTCCGTCTATTCTCCGATGGAACTCCTGATTCGAAATTGGCCGCTGATGGACCTGGAATGTTCGATTTGTGGCTTGCATTTCAGCTTGCCCCACTCGTTTCCATTGGGGTTCCGAAAATTTTCTCAATTTTTGAAGATCTCATCATTCATACTATTTCCCTGCCTTTCTTCCTCGTCAAAAGTGGTTATAGGAAGCTTTACAATGCGTTTTACTCCTCCTCTGGATCATTTCTAGACGAAGCAGAGAAACAGGGGATAGACAGAGAGAAAGCGTGTCACAATTTAGTGTTTCTCGCCGGATTCAACGCGTACGGCGGAATGAAAGTGCTTTTTCCAACTTTACTGAAATGGGTCGGCATCGCCGGCGAGGATCTCCACCGGAAGCTCGCCGACGAAGTCAGGGCCACCGTGAAGGAAGAAGGCGGACTGACTTTCGCCGCCTTGGAGAAAATGAGTCTGCTGAAATCCGTCGTGTATGAAGTTCTGAGGATCGAGCCGCCGGTGCCGTTCCAGTACGCGAAAGCGAAGGAGGACATCGTGATTCAGAGCCATGATTCTTCTTTCAAGATCATGAAAGGGGAGACGATTTTCGGGTATCAGCCGTTTGCTACTAAAGATCCGAAGATTTTTGAGAATTCGGAGAAGTTCGTCGGCGATAGGTTCGTCGGAGAAGCAGGGGAGAAGCTTCTGAAGTATGTTTACTGGTCAAACGACCGGGAGACGGTGGAGCCGACGGCGGAGAACAAGCAGTGTCCGGGAAAGAATCTGGTGGTGCTGATGGGCAGAATAATTCTGGTGGAATTCTTCCTCCGTTATGATACGTTCACTGTCGACGTCACAGAGTTGCCGCTCGGTCCGGCAGTGAAGTTCAAGTCCTTAACCAAAGCCACCGTTAAGATTTAA 1443 49.55 MASYNSSSELPLKPIPGSYGFSFFGPIKDRYDYFYFQGKDEFFRSRITKYRSTVFRANMPPGPFISSDSRVVVLLDAVSFPILFDTTKVEKRNILDGTYMPSLSFTGGIRTCAYLDPSETEHSVLKRLFLSFLASRHDRFIPLFRSSLSEMFVKLEDKLAEKKKVADFNSISDSMSFDYVFRLFSDGTPDSKLAADGPGMFDLWLAFQLAPLVSIGVPKIFSIFEDLIIHTISLPFFLVKSGYRKLYNAFYSSSGSFLDEAEKQGIDREKACHNLVFLAGFNAYGGMKVLFPTLLKWVGIAGEDLHRKLADEVRATVKEEGGLTFAALEKMSLLKSVVYEVLRIEPPVPFQYAKAKEDIVIQSHDSSFKIMKGETIFGYQPFATKDPKIFENSEKFVGDRFVGEAGEKLLKYVYWSNDRETVEPTAENKQCPGKNLVVLMGRIILVEFFLRYDTFTVDVTELPLGPAVKFKSLTKATVKI 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 18200999 18204435 + Lsi11G010510.1 Lsi11g01051 674218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi11g01051 480 Gene3D Cytochrome P450 10 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi11g01051 480 PRINTS E-class P450 group IV signature 431 449 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi11g01051 480 PRINTS E-class P450 group IV signature 331 347 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi11g01051 480 PRINTS E-class P450 group IV signature 384 402 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi11g01051 480 PANTHER CYTOCHROME P450 26 9 457 - -
Lsi11g01051 480 PANTHER HYDROPEROXIDE LYASE 9 457 - -
Lsi11g01051 480 SUPERFAMILY Cytochrome P450 11 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi11g01051 480 Pfam Cytochrome P450 305 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi08g01426 Lsi-Chr8:22492550 Lsi11g01051 Lsi-Chr11:18200999 0 dispersed
Lsi11g01051 Lsi-Chr11:18200999 Lsi11g01431 Lsi-Chr11:22854898 5.26E-39 dispersed
Lsi11g01051 Lsi-Chr11:18200999 Lsi11g01052 Lsi-Chr11:18217005 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi11g01051 K01723 - csv:101211324 872.848